Basic Information

Insect: Frankliniella occidentalis
Gene Symbol: KLHL11
Assembly: None
Location: ML763116.1:389998-397060[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.33 18 5.9 0.1 2 23 549 571 548 571 0.92

2 9 0.34 19 5.9 4.9 1 23 579 601 579 601 0.99

3 9 0.11 6.1 7.4 1.2 1 21 607 627 607 628 0.94

4 9 0.0098 0.53 10.7 7.2 1 23 635 657 635 657 0.97

5 9 4.5e-05 0.0024 18.1 0.4 1 23 663 685 663 685 0.98

6 9 0.047 2.5 8.6 0.4 1 23 691 713 691 713 0.95

7 9 0.0028 0.15 12.4 2.5 1 23 718 742 718 742 0.97

8 9 0.0015 0.083 13.3 4.3 1 23 748 770 748 770 0.98

9 9 0.0015 0.079 13.3 3.9 1 23 776 798 776 799 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.33	18	5.9	0.1	2	23	549	571	548	571	0.92
2	9	0.34	19	5.9	4.9	1	23	579	601	579	601	0.99
3	9	0.11	6.1	7.4	1.2	1	21	607	627	607	628	0.94
4	9	0.0098	0.53	10.7	7.2	1	23	635	657	635	657	0.97
5	9	4.5e-05	0.0024	18.1	0.4	1	23	663	685	663	685	0.98
6	9	0.047	2.5	8.6	0.4	1	23	691	713	691	713	0.95
7	9	0.0028	0.15	12.4	2.5	1	23	718	742	718	742	0.97
8	9	0.0015	0.083	13.3	4.3	1	23	748	770	748	770	0.98
9	9	0.0015	0.079	13.3	3.9	1	23	776	798	776	799	0.96

Sequence Information

Coding Sequence: ATGGAGTACGCTGCCCAACCAAACAACCCTATGAACTTTACAGAAAATCAACACGGCAATGTTATTTTGGAAAAACTGCGAATGCAGAAGGACAGTGGAAGATTCTGTGACGTGACACTTTACGTGGAAGGAAAGCAATTTAGGGCTCACAGGAACGTGTTGGCCTCCTGTTCGCCATATTTTAACTCTATTTTgaaaatgcaaagaatagtgAAGGAACATCTTACTATAACCTGCAAGAGTTCTGAGGTGTTTCAGTGTTTGCTCAACTACATGTACACTGGTAGTGTGGTCATAGATAAAGAAAATGTGTGTGAACTTGTCAGACTCTCCAACCACTTTTTGGTTCCCAAATTAAAAGATTATTGTTCAGAGTATCTGGAACGCTATTTGGATGCTACCAATTGTGTATCTGTCAAAGAAATGGCTGACAAGTACTCCATGCCCTCCCTCCTCAAGTACTGCTCTTCTTTTATCAAAAACAACATAGAAGATGTGATGAAGCAAACAGAGCTTTTAGAATCTCCTATATCTCTAGTTGAGGCATTTTTGTCTGATGATGCATGGACTGTGCCTCAATCAGCATTACTACCGTTTGTCACAAATTGGGTGTCACAAGATGTGCCAGGTCGTGAACAGCATACCAGGAAGCTTCTCACCTTCGTAGATTGGACTGCAATGGATCAGCAAGCTATTACTGAACATGTTGATCGTGATCCTTTGTACCCCCGAAGTGAAATTGCACTATACGCTGTACTCCAAGCTCTTCTCTCTAATAACTTACTATTCAACAAGTATCAGATAGTTTATGAATCCCTTCATATTAGATTTAACCAAagTTCTTCTGTTGGAAAGTCAATTGCTGCATCCAATCCATCTGAAGATAGTACACCAAATGTTAAATTAGAAGTCCCCTCTCCTGGGTCTCCAAGTTCTAATTCAAAActtgctgctgatggtgatcAATTTCTGGTTGATGGACGAAAGTCCAAATCTGGAAAAACACCAGATACTGGTGGTAAACAAGtagatgttgatgatgatgagggaGACACTGGGGCAGATGTAGATATTACATATGAGGGTCGATATTCAGATGATTCAACAGATGATGAAAGTCAAAAACATATGAAAGAAGAGACCGATGATCAGGGGTTTGAAGGAGATGAAGGATTTTCTAAGGATGAGCCTATGATTGACATTAAAGTAGATATGGAAAGATCTGTGAGAACTGGAGATGAAGAcgaagaggaggatgatgatgatgacgacgaagacgatgatgatgacgacgacgacgacatggaGGGTAGTGGAACTGCTGAAGATCTTTCTGCATCAAGAGACTCTGAGGGAAGTCTTTCAGAAAGTCTTTCTGGGAGTGGGCATAAAGCATTATCTCGGACAAGAAGTGGTGGTGTAAGTAAGAGAAAAAGTCGAAGAATATCTATTACTAACCGAAGTCTTCGCGTGACATCTGGGAGAGGAAATTATCCTCCAGGCTCTGCCCGACGTGGACGCCCACCAGGCACAGGCAAGAAACAACGtgaagcagcagctgctgctgctgcagccgctgctatGATGGATGAGGAAATGGCGATCACACTTGAAGGAGATGAGCAACTAGCTGTCAAGAAATTAAAATGTAAACAATGCAAGTTCCGAGCTAGAGATGACGCTGAATTAGAAGCCCATGTCAATGATGCTCATCAGGGTGCTCATGATGTGATCTATAAGTGTAGTGAATGTGAATTTACATGTGGCTATATCAAAGATTACTACAAACATTTGAAGAAACATTTTCCTGGACCTCCATTTAAGTGTGACAACTgtgaTTATCAGTGTGATAAGATGGTAAATTTAGTTGCTCATAGATCCAAAACTTGTGATGAAAAACCACACCACTGTACCATGTGTGATTATAAGTGTCGTTCAAGACCTTACCTCTTAGTCCACATGCGGAGCCATACAGGCGAGCTTCCTTACAAGTGTGATACATGTGGGAGGGCATATGCCATGCGCAGTACTTTGGAACAGCATCTCACATCTCACAGCAAAGAACAACCATATTTATGTGATGCTTGTGGCTTTGCCACAAAATATATTGCTCATTTGATGGCTCACAAGCGAATCCATACTGGAGATGTGCATCGCTGCACATTCCCAGATTGTAAATACTCCACACCAAAAAAGTCTCAGCTGCTTTCTCATGCACGCACTCATGAAGGGGTTAGACCCCATACCTGTCACGTTTGTGGAAGGGGATTTCTGGAAAAAAGTCATTTGGTGCGCCATGAGCGTATTCACTTGGATGACAAACCATTCAAATGTGATCAATGTGATTATGCTAGCTCCAGGAGAGATAAACTAAAAGAGCACTACACACGGCACCACGGTGATAATGCTTCGGCAAGAGTTCCGTACAAGGCCAGGGTGTCACGAGTTGGTGATCCTAGAAGAGAGAATGATGCTGGAGATGATTTTAATGTTGACAATGCATCCTCAACTCACTCATCAAACCACGGAATTAACCTTACTAACCCTGGAATTATAACTGGATCTCTTGGACCAAGCTCCGGTGAGATGGCTGAACTTTTGCTGGCTCATAGTatgtcagcagcagcacaacagcATCTCAAGTATGCAACAAGTTTTGCTGGTCTTGGTGGTAATGATAGTCATATGAACATGGACTTCCATCAGCCACAACAGCAACAAATGCACTCGAACTCTCGCCTATCTCTCTCTGGAGTACCAAGCAACGGAGAGTCACTGCATGCTGAAACCAAAGATGCTTTACTAGGACAAGCTGGACCTATTGCTACACCACCTTCTGCACATCACATGCATCAATCtgcagcttctgctgctgctatggctGCTATGATGTTGGATGGAAGAGTTGGGTATCATCAAGCAGGAGTTGGTTATGGTGCAGGTTCCATGTCGCAGCTACCATCCCAGTCCTCATCTTTGGCCTCATCACAAAGTAGTGAATACCCAACAATGTCATTATTTTGA
Protein Sequence: MEYAAQPNNPMNFTENQHGNVILEKLRMQKDSGRFCDVTLYVEGKQFRAHRNVLASCSPYFNSILKMQRIVKEHLTITCKSSEVFQCLLNYMYTGSVVIDKENVCELVRLSNHFLVPKLKDYCSEYLERYLDATNCVSVKEMADKYSMPSLLKYCSSFIKNNIEDVMKQTELLESPISLVEAFLSDDAWTVPQSALLPFVTNWVSQDVPGREQHTRKLLTFVDWTAMDQQAITEHVDRDPLYPRSEIALYAVLQALLSNNLLFNKYQIVYESLHIRFNQSSSVGKSIAASNPSEDSTPNVKLEVPSPGSPSSNSKLAADGDQFLVDGRKSKSGKTPDTGGKQVDVDDDEGDTGADVDITYEGRYSDDSTDDESQKHMKEETDDQGFEGDEGFSKDEPMIDIKVDMERSVRTGDEDEEEDDDDDDEDDDDDDDDDMEGSGTAEDLSASRDSEGSLSESLSGSGHKALSRTRSGGVSKRKSRRISITNRSLRVTSGRGNYPPGSARRGRPPGTGKKQREAAAAAAAAAAMMDEEMAITLEGDEQLAVKKLKCKQCKFRARDDAELEAHVNDAHQGAHDVIYKCSECEFTCGYIKDYYKHLKKHFPGPPFKCDNCDYQCDKMVNLVAHRSKTCDEKPHHCTMCDYKCRSRPYLLVHMRSHTGELPYKCDTCGRAYAMRSTLEQHLTSHSKEQPYLCDACGFATKYIAHLMAHKRIHTGDVHRCTFPDCKYSTPKKSQLLSHARTHEGVRPHTCHVCGRGFLEKSHLVRHERIHLDDKPFKCDQCDYASSRRDKLKEHYTRHHGDNASARVPYKARVSRVGDPRRENDAGDDFNVDNASSTHSSNHGINLTNPGIITGSLGPSSGEMAELLLAHSMSAAAQQHLKYATSFAGLGGNDSHMNMDFHQPQQQQMHSNSRLSLSGVPSNGESLHAETKDALLGQAGPIATPPSAHHMHQSAASAAAMAAMMLDGRVGYHQAGVGYGAGSMSQLPSQSSSLASSQSSEYPTMSLF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01435543;
90% Identity: iTF_00733235;
80% Identity: iTF_00733235;