Focc013498.1
Basic Information
- Insect
- Frankliniella occidentalis
- Gene Symbol
- CSRNP3
- Assembly
- None
- Location
- ML763261.1:77858-122244[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-102 2.7e-98 328.1 10.2 1 218 724 945 724 945 0.88 2 2 0.19 3.2e+03 -2.3 0.8 52 115 949 1012 946 1029 0.56
Sequence Information
- Coding Sequence
- ATGGATGCAACCGCAGGGGACCATGTGGAGGGAAACGCTCCTCCTGAGATTTTCTCCACGGTCACGTTACCTGTGTCTGCAAATGAGCTTGCGCTGCAAGCACTAGCAAGCCCGCTGGTtgccctgcctgccagcccAACTTCAAGTGTCCCTCATGCAGCAGAGCCCAAGGGTGGTGGAGAAGTTAGTGTGACAACAGAATGTAAAGGTGTGCTGGATACTATTGTTTCAGAGACAAATGGAGCAGAAAAGATCATAGACCCCAGCCTTGAGAAAGGTCAGCATCTGTCTATTACAAAGGACAGTTCCAGGAACAACAACAGGCCATCTTTGTCAGGAGCTACTTTGGTAAGGCAAGAAGAAACTGAGCTCTGTTATAGTACAACAGAACAAGACTTAGTCCTTGAAGGCAAACAGAATACAGCGGATCTAATAATTGTTGCTGAGCCATCAACATCAACTAGTATAAACTGCTCCTCTAGTAAATTGAGAGATAATGCTACTGACAACCTCAACAATCTTGATACTGAAAGATCTTTCAAAAATTCAGATGAAGTATGTTCAAGAGCTACTTCTGATTCTATTTCTAAAGATAAATTTTTGAATGGTGAATTATGCAAAGAAGCAGATGTACTCACAGAAACTTTTGAAGAGTTAGTACAAAACGGCCATGCATGTGAAGAATCTAATGCAGTTTCTTCAACATTGGATAAAAGTAACTTGTTAGGACTTCACGCCAACTCTCAAAatttagaagaacaagaagccCTAATAGAATCTCATGATCGGTCAGATGGCAGTGATTCAGGTCTAGGCTCTGAATCTGCTGAGGCACTGTCTTCAAACTCTGCTGATGAACTGTGTATAGAGACTACATGTGATACAGAAACATTCTGTGTTGgaaaccattttaaaaataataatgttccTACCGATGGTGTTGAAATACAGATAGGAGATACTTTTACTGTCTCAGATAAAAGATTTGTATCAAATTCTACTGATTCAGAAGTACCAGATCTGTTAAACAAGTCCAAACTTTTGTCTGACTGTGAAAGAAAATCGACTGTTTCAGAGTTTGCAAATGGAGATGATGCAGTGTCCATTTGCATAAGTAGTGTAAACCCTCATCCTTTGAATGATAACGTACATGTTGCCATTACTGAAAACCAGTCTTTTGCTGATGCCTCTCTGAATAAATGTAATCAATTACCACTAGAAAGTCAAGATCAAAGTATTCATGTTCAAAATTACAGCCCAACTGAGAATGCAAATGTTAAATTAGTCAACAAAAGTGATACTTTTCAACCTTTGCTAAGTCTTTATCCCATCCTCAAAAATTGTGCTGCAGATCTGAAAGAAACAGAATATTCTAGTGTTACAGGTAACTGTGATATGTTGCAGTGTGGGACTTCATTTCAAAGTGATGATACTATGGTGTCTACCTCTGTGGACAGCTCTCAGAAGTCATTAGAACCATTGAAAGATTGCAGTAAAATTCATACTGAAgtcattaaaaataattcagAATTATCCTCATCTAGTAAAAACCTGTCTGAATTTACAGGGGTGACTGAGGATGTGGTAACAGTCTTTGCACAAGGTCAGAATTCATTTGCTTCCAATGGACTTGCTTTGGAATCAAGTGGTAAGAATGTAAACAGAGAAACAGAGGAAAGGATTAACTGTATCTCAACATCTATAAACGTAGCATTGCCAACGGATTGCCTAGCTGGAACTGAAACGTTAAGTGAGGACAATATCCCCACATTTGATGATTTGAGGACGCCACCTGGAGAAACAGATTGTAAAGTTTCTCTGGTTGAAGAAGTAGATGAAGATATTCCCTTGCAAACACCTACAGTGACTTTGGCCCCAATACTTTCTGATTTCTCTCTTAAAACAGTTGATACTGATATTGGGAGACAAGCCACAATGCCTGCTATGGTTTGCGAGGGAGGAGACGGTGTGGATGGGCTAGATTTTCCTCACACTCATGAAAAGACTGAATCTGTTTCTTTACCTATATCTGAAAGTAGCACTAATGAATCATTGGCTGGCCCTAGTCGGAATATGTTAATGTCAGAAGAAAGTACTAATACTTTCAGAAGAAGGAGGAGTACATTAAAAAGGCCAGCAACATCTGTATGTGAAGGTGGAAGCAAGCCGAAAAGGAAAAAGTCAATTGTCTTTGACTCAGTCTCAGTATACTACTTTCCCAGAACCCAAGGCTTCACTTGTGTTCCCTCCCAGGGTGGATCGACCCTAGGAATGGCCCAAGAGCACTCTCATATGCATCGCTTCACCATGATGGAACATGCAATAGAACAGCGACGTGCTCATCGCAATATGTTGATGCAACTACGCAGAAGCACAGAGCTTGGTGATGGCTCTAGTTGTCCAACTCCAAGTAGTAGCGGTGGGGGGGCTGCTGACGAATCCAGTGATGACTCTGATTCCGATGAAGAACAAAGTGAAATTTCAGAAGAGGAGATGGATATGGATGGGTATTACTTCCTTCAGCCGGTGCCTACAAGACAACGACGAGCATTGTTAAGAGCTGCTGGAGTTCGAAAGATAGATTCTGTTGAAAAAGATGAATGCCGTGATATAAGATCATCAAGAGAGTTTTGCGGCTGTGGATGTAAAAACTTTTGTGATCCAGAAACCTGTTCATGTTCTCAGGCAGGCATAAAGTGCCAGGTGGACCGATTAAATTTTCCATGTGGTTGCACCCGAGAGGGCTGTGGGAATACTTCAGGGCGTATTGAATTCAATCCCATGAGAGTAAGAACTCACTTTATCCATACATTAATGCGCCTTGAGCTAGAAAAGAAGCAGCAAAAGGAAGAGGATGAACTCCGGCGACAACAACAATGGACTAACCAGGCCACAAATAGTGTTAGTGAAATTTTGCCAGATGCAAGTTCATCTTCTAGTACTGAATTGGAGTCATGTGGTGATGTAGGTTCCTTTGGTACTATTTCGAACTCAGAACCTTCAGTACAAAGTGACAATCAATATTTTTTGGGTGGTCAGCAAGGGTATAATCAACAATCACTTCAGCAGCAAGGACAGCGAAGAGTGCCAATGTTTGTGTTAAATCAAGGAAATTTTTCATATTCTCAGTCTGGGAACAATTACAATGCAGCTCAAGGAGCTAGTTATTCTGCTGCTGGCTCTTTTAATTATTCTAATAGTCAAGCTTCCCAAGATGTCAATtttcagcaacagcagcaattTAGTTTTCAAACTTATCCAAGTACATCCCTTCCATCAATGTCTAACATCACTGAAAATTATAGGAATAATATGTATAGAGAACAGTGTCCTGGAAGGACAGGGGATCAAACTTTTGTAAATGGATCATCATGCCAGGAGCAGCTTGGGCTATATGTTAGTGAACGCCTGCCTCTTCAAAATGCTGATGATGACTCTGCATCGTCTGCAGAAAGCACCAACTTGGGCCAATACACAGCTTTAAATTCTGTATGTACTTTAAGTAACCAATTAGAACCGTACTCCACTATTTTAGGAGGGCGGTGCCAATATGCACCACCTGCAACAGTGTGTGAAGACAGGTCAGCGGAATCAATAGATGCCAGTGCTGATGTGGAAGGCTCACAATCTAGTGATGGTACAACCAGGGAGGCTGCTGCATTGGCAACCCCTTCAGATGACTGTGATGAAAACTTTGGTGAAATAATTAAGAAGTCAATAGTTGAAACGGTATCTGCATGA
- Protein Sequence
- MDATAGDHVEGNAPPEIFSTVTLPVSANELALQALASPLVALPASPTSSVPHAAEPKGGGEVSVTTECKGVLDTIVSETNGAEKIIDPSLEKGQHLSITKDSSRNNNRPSLSGATLVRQEETELCYSTTEQDLVLEGKQNTADLIIVAEPSTSTSINCSSSKLRDNATDNLNNLDTERSFKNSDEVCSRATSDSISKDKFLNGELCKEADVLTETFEELVQNGHACEESNAVSSTLDKSNLLGLHANSQNLEEQEALIESHDRSDGSDSGLGSESAEALSSNSADELCIETTCDTETFCVGNHFKNNNVPTDGVEIQIGDTFTVSDKRFVSNSTDSEVPDLLNKSKLLSDCERKSTVSEFANGDDAVSICISSVNPHPLNDNVHVAITENQSFADASLNKCNQLPLESQDQSIHVQNYSPTENANVKLVNKSDTFQPLLSLYPILKNCAADLKETEYSSVTGNCDMLQCGTSFQSDDTMVSTSVDSSQKSLEPLKDCSKIHTEVIKNNSELSSSSKNLSEFTGVTEDVVTVFAQGQNSFASNGLALESSGKNVNRETEERINCISTSINVALPTDCLAGTETLSEDNIPTFDDLRTPPGETDCKVSLVEEVDEDIPLQTPTVTLAPILSDFSLKTVDTDIGRQATMPAMVCEGGDGVDGLDFPHTHEKTESVSLPISESSTNESLAGPSRNMLMSEESTNTFRRRRSTLKRPATSVCEGGSKPKRKKSIVFDSVSVYYFPRTQGFTCVPSQGGSTLGMAQEHSHMHRFTMMEHAIEQRRAHRNMLMQLRRSTELGDGSSCPTPSSSGGGAADESSDDSDSDEEQSEISEEEMDMDGYYFLQPVPTRQRRALLRAAGVRKIDSVEKDECRDIRSSREFCGCGCKNFCDPETCSCSQAGIKCQVDRLNFPCGCTREGCGNTSGRIEFNPMRVRTHFIHTLMRLELEKKQQKEEDELRRQQQWTNQATNSVSEILPDASSSSSTELESCGDVGSFGTISNSEPSVQSDNQYFLGGQQGYNQQSLQQQGQRRVPMFVLNQGNFSYSQSGNNYNAAQGASYSAAGSFNYSNSQASQDVNFQQQQQFSFQTYPSTSLPSMSNITENYRNNMYREQCPGRTGDQTFVNGSSCQEQLGLYVSERLPLQNADDDSASSAESTNLGQYTALNSVCTLSNQLEPYSTILGGRCQYAPPATVCEDRSAESIDASADVEGSQSSDGTTREAAALATPSDDCDENFGEIIKKSIVETVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -