Focc007151.1
Basic Information
- Insect
- Frankliniella occidentalis
- Gene Symbol
- ncor1
- Assembly
- None
- Location
- ML763048.1:670414-737069[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-08 2.3e-05 24.3 0.0 3 43 684 724 683 726 0.97 2 2 8.5e-16 9.4e-13 47.9 0.4 3 46 1026 1070 1024 1070 0.97
Sequence Information
- Coding Sequence
- ATGGAAACGGTGCAACAGACCGTGGTGCACCTGGACCATGGTGGTATACAACAGCCGTCTTCCATGGCGTACGCGCAACGCCCGTCTCAGCTGCACAGGCCTTCCCAGCCAACTGAGGGGTTGTCGTTCAAAGCCCAGCGACAGATCCCACTGTCCAACCCCCAGCCCTTGCCCCCGCACTCTACCTCGGCCGCCGTGCCCACCTCCGTGCCTCCCCCGACCTCCGGAGGCCCTGGGGGCCCTGCCAGCTACCAGGTGCGGaccagcgccccgggccccggccatgGCCCCCAGCCCAACACCTACCACCTGGGGATGTCGGTGCGGgaccctccccccgggccccaccccgggccccagggtgccgcccccgcgggacccAACCCTAGAGAAGCACTGCGGTACCTCACCCCCTACAACAACACGCCCATGTCCTTCCGGGAGCCCACGTATAGACTGCCTGTGCCCCCTGGCGGAGCGCCCGGCGTCCAGCACGGTGGCCAGCATGGCATGCAGCATGGTGGCCAGCACGGCGTCCAGCACGGAGGCCAACACAGCGTTCAGCACGGCGTCCAGCACGGTGGCCAGCACAGCATTCAGCATGGCAACCAGCACGGCAaccagcacgcccagcacggTGCCCAGCACGCTGGACAACACGGTGGTCAGCATGGACCCCAGCACGGTGGTCAGCATGGCGGCCAGCATGGTGGTCAGCATGGTGCTCAGCATGGCGGCCAGCTTGCTGGCCAGCACGGCGTGCAGCACGGCGTGCAGCACGGCGTTCAGGACGGCcccggggagcgaggggagggggagagcaggccCCCGGGCTCTGGGCCCGGCTTGCTCATCGCTGGCCAGCCGCAGACCGTGGACCTGGGGCGGGCTCCGGAGGGCACGGTCGTGCGCACCCCCCACGGCACGGTGGTCACTCTGCCACTGAGGCAGCCGCTCgtcggctccgcggccgccgacccgcgcgccaGGGTCTTGGGCGACCAGCCTCAGTACCAGGTGTTCCTGCCTCCACACGGTATGAACACCGTCGTGTCTTCGGCCCCCACTCCTGTGTCTGtccaggcgccggcgccgagcaaGCCTCAACAGCCTATGGACGCCGGGCCTCCATTCAAGAAAATCAGGCTAGGTGACGCGAAGCAGGTGTTGGAGCCCTTGAGGGTGGACACCAGGGAGCAGCCGGCGTACACGCCGCAGGTCGAAGCCATCTCACCCACGCTGCCAAGTGAGGCTCAGACGGACGAGGCATTTCGAATAGCCAAGGACGATCTCCTAAATGCTATCCATAAAATGGATCAGGAAATTAACAAAGGAGAAAGGGAGTTAAATGCCTTAAAAAGGAAGGAGGGTGAGCTAACTAGAAATGCCTCAAAGTTACGTAACCGGCGGCACATCAAGAAAGAACCGGATGAAGAGATAACAACACCCAAACATCAAAGTCCTGCTCAAAAAATATATGCTGAAAATAGAAGGATGGCAATGGAGGCTCACAATGCTTTAAGCAAACTTGGTCCTGACATTGACTATCCTTTATATAACCAGCCATCTGATACTGCTGTGTATCATGAAAACAAGCGCCAGTACCTGACTTTTAAAGAGACTTTAATGGAACATTTAAAGAAAAAGCATGCAGAGAATGAAGAACGTGATAAATACCTTGCAAGCACATATTCAAGACTAATGCAAGAGTGGGTGAGAAAAGTAGAACGTACTGAGTCATCTCAAAAGAGAAAGGCAAAAGAAGCTAAAAACCGTGAATTCTTTGAAAAAGTATTTACGGAATTGAGAAAGGCAAGAGAAGACAAAGAACGATTTAACCGTGTTGGTGCTCGCATTAAAAGTGAGGCTGACATGGAAGAAATCATGGATGGCCTCCAAGAGCAGGAGATGGAGGATAAGAAAATGCGCTCCATGGCAGTGGTTCCACCAATTTTACTTGCCCCTTCTCAAAAGCGCCTACAGTTTCAAAATAATAATGGTCTTATTGATGATTATAGTTCTGAATATAAAGAAAGACAATTATTGAATGTCTGGACAGCTAGtgaaaaagaaacatttagGGAAAAATATCTTCAACATCCTAAAAACTTTGGTTTAATAGCATCTTATTTGGATAGAAAAACTGTTTCTGATTGTGTACAATATTATTACCTTAGCAAGAAATCGGAGAATTATAAGCAGCTATTACGTAAATCTAGGCAAAGAACTAGATCAAGTAGAAATAATCCTGGAAAGCCTAACAATTTGGCAAACTCTGCAGGCCTTGTAGACATTTTAAGTAGCACTGGTGTTACCACTCGATTGCAACGAGAGCAACTCCAACAGAAGAGAGAAGAACCTCAAAGAAACCAGCGGGAACCAGCTGAACCAGCAGCTGATTCCCCTAAGCCCCCCACTTCAACCTCACCAAGTGTTGTGAACAATAGTAGTACAGTGTCAAACTGTGTAGGTGCAACTACTAATTTAGTAGCATCATCTCAACAAAACGACACACCAGCTCAAGATGCAAAGAAAGGGGAGTCTAAAGTAGAAAataagaagaaagagagaagaaaagaagataagaaaaagaaagagagtgAGCAGCTTGAATCAAGTGATGAAGATATCAGTGAACAAGACAAGCCGGTGGGCACGCAGCCCTGCATCCTGTGCAAGCAGCAGGTGGACGGCATGTCGCAGtcgcgcctgctgccgcgctcGCAGGCCGCCCAGTACGGGCTGCGCGAGGACGAGGtgtcgccgggcgcgcgcgtctgcaACCCGTGCCGCTGCAAGGCGGTGCGCTCGCGCTACGTGCACTGCCCGCTGCCCTCGTGCCCCAACGCCAAGGGCCGCGTCAAGCGCGTGCGCCCCTTCCCGCCCAAGTGGGCCGAcctgccggccgagcagcgcgagccCATCATCGCCGAGTTCCAGATCCCTGCGGGCGTGACCAAGGCGTGCACGGCGTGCGTGAACCGCATCTCGCGCCGCATCAGTCCGTCCGAGGAGCACGCCGCCAGCGGGGACGCCTCCTCCAGCCCGTCGGTCGCCTCCGCCACCAACTCGCTGCGCTGGACCGAGGACGAGACGGAGCTCCTCAAGAAGGCCCTGCGCGACCACGGCACCAACTGGCAGCGGGTGTCGGAGGCCGTGGGCGGCACCAAGACGCACCACCAGTGCAAGAACTTTTACTTCAACTACCGCAAGAAAATTGGGCTGGACGCGTTGGTGCAGGAGTACCACAAGGTGAGGGAGAACCACctgggcgaggagaggaagCCCGCACTCACggatgaggaggagagcgggtcCAGCACGTCGTCCTGTGACGAggtgctccccgccgccgggcctcagACCGTGGACAGCGACACGGCCAGCGCCAAcagcgcctcgcccagcgcggcggcggcggctgcagccgctgcggcggccaaggctgcgggggcgacggcggctgcGCCGACATCAGCAGCtccagcgacagcggcagcgccggggacggccgcgccgggggcgggaccCTCGGCGACGGCTGCTCCTGGGActgccgcggcgccctcccccgggccgacgcccagcgcggccccggctccagcagTGGCCGCGGTCGcagtcccggccgcgccgaccgtCGTGACGGAGGCGGACAaggccgccagcccggcgcccgtCGTGGCCATCGCGACGGGGTCCGCCACCACGCCGTCCGTGACTCCGGCGGCATCGCCGGCCCCCAACGGCACCCTCACCCCTATCCCAGTCTCGGTGACCATGCCAACCTCCGCGACGGCCACCTCAACCTCGCCGCTGAGCGTACCGACCCTGACCACCACTCaggcgcgcaccaccagcgAATCTTCCGACCAGCGGACGACCAACAAGGAGGACTACGACAGCTCAGCAACGACTGCGGAcgaagggcagggaggggctgaaccgccgcaggccccggcacccggccagacgcccggcccgggaccggccggccaggccaacGGGCCCTCGTCGCCCCGCGTCACGACGGTCAAGGACCTCATGCTGAGCGTGATCGAGGTGTCGCTCAAGAAGAcgcagagcgcggcgagcgacacggccccgcccaccctcaACTCCATCCTCAACTCGGAGAACAGCTTCATGGGCCCCGGCCGCGActtccgccccgctgcccccggcgggccggccggcggccagggtgcCGTACCTGGGCAGCAGGGCTCGCCCGCCGACAAGCAGGCCGCGGTGACCAACTCCCACCTCGGCGAGCGGCCCGAACCCCAGCCCAAGGACGCCGCCAACGCACACCATCCAGACCTACCCTCCGGCcttgccccgggcccggggtcgaGCTCGGGCCTGCCCCTGGCCAAGGACGGTCTCGTTGTGGTGCAgGACCAGCAGGCGCTGCGCGAGCGTGACGCCGCCCCGAGAGACAACCTGCCCGAGGACTTGTCCGTCAAGAGGCCGCgcgacggcccgcccgggcccgccacccTGGGCGTCGCCGCACCCTACCCCGGGCGCAACCCCTCACCCGCCGGCCTGCAGCACTCGCTGCACGTGGCAACGCACCCTGGGGCGCCGCAcgtcgggctgggcgcgctcggcaaggctggccccggcggccccgtgtACCggacgggccccggcggcgagggcacCTACTACCACGGCGTGGGGGCGCAGCCCCACGGCCagcccgctacgccccacctGGTGATGGGGCCTCGGACAGtgacgcccggcgccccgcacgcgccgcacgcactcAACCCGCACGCCATCAAGCAGCCCCTGAAGGTGGTGCCGCCCACCTTACCGCTGCCGCAGCAGACCAAGCTGTCGCCCAAGCTGGTGACGCCCagcacgcacggcgcgcaccacgGCTCCCTGAGCGggcacgggccgcacggcgggcaCCAGGGCGGGCCCCTGGGCGGGCACGGGCCGCACAAGGCGGGCTCCATCACGCACGGCACGCCCGTGTCGTCGCCACAGCGCTACAACGAGaacctgctgcggccgccgcacgtGACGCACCAGCACCAGTCCCTGGGCAAGGAGGGCTCCACCGGAGGCGGCTCCATCACCCAGGGCACGCCCGTGCAcctgcccgcgcgcctgcccacggccgccaccccgATGTACGACTACTACAAGCGGCCGCCGTCCGGCGGCGTCACCTACCCGCACCCGCCAGTCCACCCCTCCGTGCCGAGCCCCGTGACCACCTCGGCGCCCTCGACAGGAGGCTTCACGTCGCCCTACCCCCACCAGGGCGCTCGGCCCGTCACCTCGTACACCTCCGAGCAGCTCCACTCGAGGCAGATCATCATGGCGGACTACTATACCTCCCAGCAGATGCACGGCACTCGGCGGCCACCGGAgaagcccggccagcagggccctcCGCTGTGGGGTCCGGGCGGTCCTTCCCCCAGGgtgtcgcccggccccggcggcccgtcaCCTCACAGCTCGTCGCCGCACAGCTCGTCGCCACAGCCTCAACCGCCGCCCCAGTCCTCGCCGGTGCAGGCCAAGGGCCCCGCCACCATCTACATCCAGAAGTACCCGACAcagccgcccagccagccgccacaACCCCAGCGGCTGCCCCCGgagcgcacgccgcccccgcaggcccggcAGGGTGTGATCCAGCGCCACAACACgacgccacagccgccgccgcagcacgccccCCACCAACCCTCCCACCAACCCTCCCACCAACCTCACCAACCCTCCCACCAGGCTCACCAACCCTCCCACCAGTCTCACCAGCCTCATCAGTCCCATCAATCCCACCAGTCCCATCAGCCCCACCAACCACATCAACCCTCTCATCAGTCTCACCAAGCCCATCAGACACTGCAGTCCCACCAAccagcccgcccgctgcacttcAGCCACCCGCCCCAGGGCCACGAGGCCTTCGCGTCCCTGGTGGACGTGGCcgtcgcccagcccagcctgcccgTCCCTGTGACCGCTTCCGGCGCCGACAAGCGACAGGCCCACCAGCACCATGAGGGCCTTGGAAAGACCATGGCCGACTCTCTAAGAGACCGCGAGCGAGATCAGCGCGACCAGAGAACCCCTCCAGGACACCATCCTGGGCCCCCTCCAGCCCAGTCGGACAGCAGACAGCAGCAGATCCTGATCCAGCATCAccagcaacatcagcagcagcagcagcggcaccctcCGCCCATCCAGTACCACCAGCTGCAGCATCAGGTGCAGCACCAGGTGCAACATCAGGTGAGGCTGGAGCAGCACCGACAGATCATGATGGCGGAGCGGGAGAAGgagcgcgagagggaggcgACGCGCGTGTCGGGCCCCAGGCACACGCCctcgccgcagctgcagcagctgcaacagcagctgccGCCCAGCACCCAGGCCACGCAGGTGTCCATCTCGCaggccccgagcccggcccagaGGGAGTCGAGTGTCGTGAACAGGACCACGCCGCTGCCCCAGTCCGGCCTCAGTGGTGGTAGCAGCcagagcgcggggccgggagctcctccggggccgccggctgccccgggacaggccggcgcggccaggccgagctCCACGTCCGGGGACTCGACGCTCACGGCAGCCAGCGTTATTGACGCCATCATTACTCACTCCATCAACGAGGGCTCGCCTTCCAGCAACGCGAATCACCCCGGGCCGCACACCTCACGGCTGGGCGACCGCCTGTTCCAGGGATTCCATCGAGAGACCGGGCCGGCGACAAACGACATTGCCATCAAGGCGTCCCCGCTGAAGGGCGGGTCGGTGACGTCGGAGACTGGTTCAgacgcggcgtcctcggccacgAACAgcggccctccgccccccgcgcaggtCAAGAAGACCCTGAGCGAGAACATCGACTCCATCATCACCAAAGAGCTGAACGCCACCCCCAACTCGTTCCCGCGCACCCTGACCTACGGGTTCCCCatgggcgcgcagggcgtggtcGCCCCCGGCGCTCAGTCTGTCGAGGAGCTCTGCAACTGGAAGCTGAGGAGAGCGATGCAGCAGAAGGAGGAGATGGAGGccgcgcgggagagggagcgcgagcgcgaccggGAGAAGGGCCGCAGCACGCCCacccagccgggccagccggacGAGCGACAAATCATCCGGATCATGTCGAGTCCTCGCAAGGGCACCCCGGGGCCGCCGTTCGGCGCGGAGCCCGTGTCGCCACCCGACTCTGCCCACTCTGCCACCTCGTCGacaacgacgaccaccaccaccaacagcgGGAGCTCTGCCGGCTCCGCCTCGCACTGGCTGCCCACCACGggggcgcccaccccggcctcggtggccgccgccgtgtcgggcAGCGTGCCGGCTAGCTTGGCTGCCTCCGACCCCGTGGCGTTCTTACAGCAGCGTCGCTTCTTCCCGGACCGGACCCAGATGTCGCCCCTCGACTACGTGAAGAACAGGATTGTGGAGGTGATGCGCACCTCGGAGGACGACAAGGTGACGGACAGCCGCAAAGAGGGCGGCGATGCTGcgtcagccggggcggcggccagcaaggCCGAGGGCCGCAGCGCCAGTGGCAGCCCGGGCGAGATGGTGATCGACGAGGGACGGTCCTCTGACGAGAAGCCACCCTCCGCTGCACCGCCGACGCAGCCGCCCCACACCCAGGCGCACGCCGCCTCGCCGTACGTGCAGACCAGCTCCACGTACGCCTTCCCCTATTCGGCGCTTAGCGTACCCCAGGCGGCGCTCACCCCCCagacgggcgcggccgcccccaagcCACCCGGGCTTCTGCCACCGTCCGTGCCGAAGGAGCCGGTGGCCGAGCCCAAGCCTCTGCTGTCAGCGCAGTACGAGGCGCTCTCTGACGAAGACTAG
- Protein Sequence
- METVQQTVVHLDHGGIQQPSSMAYAQRPSQLHRPSQPTEGLSFKAQRQIPLSNPQPLPPHSTSAAVPTSVPPPTSGGPGGPASYQVRTSAPGPGHGPQPNTYHLGMSVRDPPPGPHPGPQGAAPAGPNPREALRYLTPYNNTPMSFREPTYRLPVPPGGAPGVQHGGQHGMQHGGQHGVQHGGQHSVQHGVQHGGQHSIQHGNQHGNQHAQHGAQHAGQHGGQHGPQHGGQHGGQHGGQHGAQHGGQLAGQHGVQHGVQHGVQDGPGERGEGESRPPGSGPGLLIAGQPQTVDLGRAPEGTVVRTPHGTVVTLPLRQPLVGSAAADPRARVLGDQPQYQVFLPPHGMNTVVSSAPTPVSVQAPAPSKPQQPMDAGPPFKKIRLGDAKQVLEPLRVDTREQPAYTPQVEAISPTLPSEAQTDEAFRIAKDDLLNAIHKMDQEINKGERELNALKRKEGELTRNASKLRNRRHIKKEPDEEITTPKHQSPAQKIYAENRRMAMEAHNALSKLGPDIDYPLYNQPSDTAVYHENKRQYLTFKETLMEHLKKKHAENEERDKYLASTYSRLMQEWVRKVERTESSQKRKAKEAKNREFFEKVFTELRKAREDKERFNRVGARIKSEADMEEIMDGLQEQEMEDKKMRSMAVVPPILLAPSQKRLQFQNNNGLIDDYSSEYKERQLLNVWTASEKETFREKYLQHPKNFGLIASYLDRKTVSDCVQYYYLSKKSENYKQLLRKSRQRTRSSRNNPGKPNNLANSAGLVDILSSTGVTTRLQREQLQQKREEPQRNQREPAEPAADSPKPPTSTSPSVVNNSSTVSNCVGATTNLVASSQQNDTPAQDAKKGESKVENKKKERRKEDKKKKESEQLESSDEDISEQDKPVGTQPCILCKQQVDGMSQSRLLPRSQAAQYGLREDEVSPGARVCNPCRCKAVRSRYVHCPLPSCPNAKGRVKRVRPFPPKWADLPAEQREPIIAEFQIPAGVTKACTACVNRISRRISPSEEHAASGDASSSPSVASATNSLRWTEDETELLKKALRDHGTNWQRVSEAVGGTKTHHQCKNFYFNYRKKIGLDALVQEYHKVRENHLGEERKPALTDEEESGSSTSSCDEVLPAAGPQTVDSDTASANSASPSAAAAAAAAAAAKAAGATAAAPTSAAPATAAAPGTAAPGAGPSATAAPGTAAAPSPGPTPSAAPAPAVAAVAVPAAPTVVTEADKAASPAPVVAIATGSATTPSVTPAASPAPNGTLTPIPVSVTMPTSATATSTSPLSVPTLTTTQARTTSESSDQRTTNKEDYDSSATTADEGQGGAEPPQAPAPGQTPGPGPAGQANGPSSPRVTTVKDLMLSVIEVSLKKTQSAASDTAPPTLNSILNSENSFMGPGRDFRPAAPGGPAGGQGAVPGQQGSPADKQAAVTNSHLGERPEPQPKDAANAHHPDLPSGLAPGPGSSSGLPLAKDGLVVVQDQQALRERDAAPRDNLPEDLSVKRPRDGPPGPATLGVAAPYPGRNPSPAGLQHSLHVATHPGAPHVGLGALGKAGPGGPVYRTGPGGEGTYYHGVGAQPHGQPATPHLVMGPRTVTPGAPHAPHALNPHAIKQPLKVVPPTLPLPQQTKLSPKLVTPSTHGAHHGSLSGHGPHGGHQGGPLGGHGPHKAGSITHGTPVSSPQRYNENLLRPPHVTHQHQSLGKEGSTGGGSITQGTPVHLPARLPTAATPMYDYYKRPPSGGVTYPHPPVHPSVPSPVTTSAPSTGGFTSPYPHQGARPVTSYTSEQLHSRQIIMADYYTSQQMHGTRRPPEKPGQQGPPLWGPGGPSPRVSPGPGGPSPHSSSPHSSSPQPQPPPQSSPVQAKGPATIYIQKYPTQPPSQPPQPQRLPPERTPPPQARQGVIQRHNTTPQPPPQHAPHQPSHQPSHQPHQPSHQAHQPSHQSHQPHQSHQSHQSHQPHQPHQPSHQSHQAHQTLQSHQPARPLHFSHPPQGHEAFASLVDVAVAQPSLPVPVTASGADKRQAHQHHEGLGKTMADSLRDRERDQRDQRTPPGHHPGPPPAQSDSRQQQILIQHHQQHQQQQQRHPPPIQYHQLQHQVQHQVQHQVRLEQHRQIMMAEREKEREREATRVSGPRHTPSPQLQQLQQQLPPSTQATQVSISQAPSPAQRESSVVNRTTPLPQSGLSGGSSQSAGPGAPPGPPAAPGQAGAARPSSTSGDSTLTAASVIDAIITHSINEGSPSSNANHPGPHTSRLGDRLFQGFHRETGPATNDIAIKASPLKGGSVTSETGSDAASSATNSGPPPPAQVKKTLSENIDSIITKELNATPNSFPRTLTYGFPMGAQGVVAPGAQSVEELCNWKLRRAMQQKEEMEAARERERERDREKGRSTPTQPGQPDERQIIRIMSSPRKGTPGPPFGAEPVSPPDSAHSATSSTTTTTTTNSGSSAGSASHWLPTTGAPTPASVAAAVSGSVPASLAASDPVAFLQQRRFFPDRTQMSPLDYVKNRIVEVMRTSEDDKVTDSRKEGGDAASAGAAASKAEGRSASGSPGEMVIDEGRSSDEKPPSAAPPTQPPHTQAHAASPYVQTSSTYAFPYSALSVPQAALTPQTGAAAPKPPGLLPPSVPKEPVAEPKPLLSAQYEALSDED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -