Basic Information

Insect: Frankliniella occidentalis
Gene Symbol: SNAPC4_1
Assembly: None
Location: ML763031.1:499210-503474[-]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 5.9e-05 0.065 13.2 0.0 20 46 250 279 247 279 0.87

2 5 2.8e-11 3.1e-08 33.5 0.1 1 44 285 330 285 332 0.91

3 5 1.1e-11 1.2e-08 34.8 0.1 1 43 338 384 338 387 0.96

4 5 5.4e-13 5.9e-10 39.0 0.0 1 46 393 438 393 438 0.97

5 5 1.6e-13 1.8e-10 40.6 0.2 2 44 445 487 444 488 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	5.9e-05	0.065	13.2	0.0	20	46	250	279	247	279	0.87
2	5	2.8e-11	3.1e-08	33.5	0.1	1	44	285	330	285	332	0.91
3	5	1.1e-11	1.2e-08	34.8	0.1	1	43	338	384	338	387	0.96
4	5	5.4e-13	5.9e-10	39.0	0.0	1	46	393	438	393	438	0.97
5	5	1.6e-13	1.8e-10	40.6	0.2	2	44	445	487	444	488	0.96

Sequence Information

Coding Sequence: ATGGAAGATGCAGATGAAGAGAAAGTGAAGTTACTGGAGTCGATCCGCTTACAAGATGCTGCTCTGTCAGTGGTTGTGGATGACACCATAGCCACGCTTGACAGTGACTCGGACGGCGAGCGGGATTCAGAACATGAAGGTATGTCTACTGTAACAGACGACACTGTTCCAAGTGCAGCTATTGAAGAAGAAAATTCCATTGACAATGAAGATACATGCAAAAACCCATCCTGGGCTGAAGCCCTTGAGGCAAACCAAGAGTATGATGCAGTATTGGCGCAGTTAGAGGCAGAAATTAGACAAAATATAGCCAAGGTGGTAAAGCAATTAAATGAAGTTCAGGACAACATTCATAGTAACAGTAATCTTGGGAATTCCATCAACATGAAAAGCCAGTGGATGTACGTCTTTGGTATGCCGTACTTCAAAACCGAGAATTTTTATCCTTGTCCTTTTAACGAAGATTATCATACTAAGAAGCAAAACAGAGAGATTTGCTGGTCAGAACTTGATTCTTATCATCAATGGGTTACATCTCACAAGAAAGCATTGAGTGACGCTGTGACTGAGGTGGCAACTCAAAAGTGTCTCAAAGAAGCAAAGCTAAAGTTAGCTGTCTTACGCAAAGAATTGGAATCAGAGCGACTGTCTGGAAATACTGAACGGTTTGTTGAGATTGAACAAAAAATTGCTGATTTTGATGTCTCATCTGTGGCTCAATCCATGCTTGATGAAGAAATTGCTAATGGTGCGCATGATTGGATGAAAATATCAGCTTCATTTCTGGATGGAAAACAGTCACCTGAAAGCTGCAGGAGCTTTTGGAACTTGTACTTACACCCCAGAATCAATAAAACGCCATATACTGAAGATGAGGAAGGAAAGCTTCTTGAATTGGCCAAAAAATACAACCATCAAGATTGGGATAAAATTGCAGAAGAGCTTGGAACTAATCGTTCAGGTTATCAATGTTTTATTGTTTATCAAAACAAACTAAATGTATCTTTGAAAAGGAACACTTGGGACCCTGCGGAAGACAAAAAGCTTCTCCGTGCtgttgaaaaatataaaattgggAACTTTATTCCGTGGGGGAAGGTTGCATATGATATGGAGAACCGAACTAAAACTCAAGTTTTCAACCGTTGGACTTACTCACTTAATCCAGCTATTAAAAAAGGACGGTTTACTGAAGAAGAAGATATAATGATACTAGCTGGAGTGCAAATGTGGGGTGAAGATTTTCAGCGAATCGCAAATTTTTTGAAAGATAGGACCACTTGCCAAGTTAGGGACCGTTACAAACATTACCTAAATAGACCAGGCAATGGTGTTCCATGGACTGTAGATGATGACAAGAATCTCATTGAATTAACAGAAAAGCATGGAAGAAATTGGGCCAAAATATCTAAGTGGTTTCCTACCAAAGATCGCACTCAGGTGCGACACCGTTTTACTACTCTGTCTCGATGGAGAGCCAAAAATCCAGATTCTCCTATATCTGAAGCTCCTGCTCGTGTTTACAATCCTAACATTTATTCGCAGTTCCAAGAGCAATGGGACAAAGCTAGAGCTATATTAAGCTGTGATAATTTAGAAGATATGGTAAAAGCCAAGAACAATCTCATCACATCTTtagtgaaaaagaagaaaaagtcaaTCTTAGATGTtcctaaaaagaaaaaacaatccCCAATCGAGGCAGACCTGGTAAATTATTTTCGCTGCAGTTATGATTTGCCTGGGGGTCCCAAAAAGCTTAATGTACGAAGAGAAGAAGCACAAAAGTATGCTAAAGAGCTAGTTATGCTACTTAAGCTTTTAAACTCAAAATTAAATCTACCTTGTTTTGAGGAGATTCAAACTGATACATCTCTTACACCAGCTGACAGGGATATACTTGCCAACCTTGTTTTGGACACCATTGATTTCAAAGATTTTCCTGAAACTATCCTTGAGTCAAATGTTTTGGGAAATACTAACCCTGACTTGGAGACTTCGGAAAATACAACAGCTCAACTTTTTAGTGATGATACTGTGTTTTATGAAGATGATTCTCCTCTTCAAGGATGCCCAAAAAATATTGACTATATTCCAAGTCACAATTATGCCTCTTTGTATGTTGATTTACCTGTTATGAATTTTGCTCAAGATGAAGTTGTTGCTGATAGAAATCAAGATCCTGCCTTTTTTGAGCCACCTCTTAAGCAACCTAGTATTTGTCATAAACCAATAAAAAGTAGTTCTGCAAAAGGGAAAGGAATGTTTATCTTCCCACCTAATTTAACAACTCTTGTTGGTCTGAGAACTTTCCTATTGAATAGGCGCAATTTGATCAATTTGAGCAATAAAAATTTGGATAAGGAAGACTTAAGTGAAGtaagttttgaaaaattagaGGAAGCCAAGAAAAAGTTTGATGAAAGAATGTTTTGCCTTTTTCTTTGGCCAGCGCTCATGTCAAGATACAGACCAAATGACAGTTCAAATATTTTCAATGATGATAAGGATGATGAGGTTTTTGTTCCAAATCCAGTTCCTATAGGACGCAGCAGAGGAAAGAAAGGGCAGAAGAAAAATGCTGACTGTACAACTGAACAGGATCCTGGCAATCCCTCTGGATCGACAAATCAATTGATTGTTGTCAATGTTGAAAATTCGTCTCAGCAATGGAGCTTTCCATTAATCTCAGAAGGTGTATCTAATCAAGCATGTAAAAGAGGTTTTGATCCTTCTATCCCTAGCACATCTGGTCTCCCAGCCAAAAGACGTAAAGTTATGGAAATGGAATCAGATGATGACCCGGATGATCCGGGTGTAATGTGA
Protein Sequence: MEDADEEKVKLLESIRLQDAALSVVVDDTIATLDSDSDGERDSEHEGMSTVTDDTVPSAAIEEENSIDNEDTCKNPSWAEALEANQEYDAVLAQLEAEIRQNIAKVVKQLNEVQDNIHSNSNLGNSINMKSQWMYVFGMPYFKTENFYPCPFNEDYHTKKQNREICWSELDSYHQWVTSHKKALSDAVTEVATQKCLKEAKLKLAVLRKELESERLSGNTERFVEIEQKIADFDVSSVAQSMLDEEIANGAHDWMKISASFLDGKQSPESCRSFWNLYLHPRINKTPYTEDEEGKLLELAKKYNHQDWDKIAEELGTNRSGYQCFIVYQNKLNVSLKRNTWDPAEDKKLLRAVEKYKIGNFIPWGKVAYDMENRTKTQVFNRWTYSLNPAIKKGRFTEEEDIMILAGVQMWGEDFQRIANFLKDRTTCQVRDRYKHYLNRPGNGVPWTVDDDKNLIELTEKHGRNWAKISKWFPTKDRTQVRHRFTTLSRWRAKNPDSPISEAPARVYNPNIYSQFQEQWDKARAILSCDNLEDMVKAKNNLITSLVKKKKKSILDVPKKKKQSPIEADLVNYFRCSYDLPGGPKKLNVRREEAQKYAKELVMLLKLLNSKLNLPCFEEIQTDTSLTPADRDILANLVLDTIDFKDFPETILESNVLGNTNPDLETSENTTAQLFSDDTVFYEDDSPLQGCPKNIDYIPSHNYASLYVDLPVMNFAQDEVVADRNQDPAFFEPPLKQPSICHKPIKSSSAKGKGMFIFPPNLTTLVGLRTFLLNRRNLINLSNKNLDKEDLSEVSFEKLEEAKKKFDERMFCLFLWPALMSRYRPNDSSNIFNDDKDDEVFVPNPVPIGRSRGKKGQKKNADCTTEQDPGNPSGSTNQLIVVNVENSSQQWSFPLISEGVSNQACKRGFDPSIPSTSGLPAKRRKVMEMESDDDPDDPGVM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -