Focc009519.1
Basic Information
- Insect
- Frankliniella occidentalis
- Gene Symbol
- kn
- Assembly
- None
- Location
- ML763027.1:1512659-1524233[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.5e-50 2.5e-46 158.1 0.0 42 135 217 311 199 320 0.94
Sequence Information
- Coding Sequence
- ATGCAGCGCGTCCACctgcacaacaaaaacaacaacatgctGCCGATGGCGATGCCACGCGCGCAGCTGTGCTCATCCCTCGCCATACTGCGGACCAACCAAGCCTTGAAATTTGAAACCaTGCATTTAGATTCGGTTAGAACCGCTTCCTTTTACACAGTTACGCGTTCTTGTCAGGACACAAGACAGATAAGACGAGACACGTTTGCAACCACACGGCAAAAACCAAACGACGACGTCATAGAACAAAGagAGACAGAGACGACGCGCCGACCTgaccgtgagtgcgagagagagggacaagACGACAGgagtgccaccgccgccaccctgcccgccgccgtcgccgccccgccgcccagcccttGGGCTGGGGCCGTAGGGGGCGTCATGGAGCTGGAGCCGGTGTGGGGCCTGGGCACgggcctcggctcgggcctcggctccgggctgggctcgggcctcggcgccggccgcaaGCTGTACGaggccgccggccaccacggcATGCTgggccaccaccagggccaccacctGTCCTTCGGCctcgaccaccaccgcgaccaccgggaccaccgcgaccaccaccggcccctCAAGGAGGAGCCCGGCTCCAGGGCGTGGATGCACCAGCCGTCCCAGGAGCACCCCAGCCTGGGCCTGAGCAGGGCACACTTTGAGAAGCAGCCCCCGAGCAACCTGCGCAAGTCAAACTTCTTCCATTTCGTCATCGCCTTGTACGACCGAACCGGCCAGCCCGTCGAGATAGAGAGGACAGCCTTCGTTGGATTCATAGAGAAGGAACACATGGAGGCAGATGGACAAAAGACAAACAATGGAATTCAATATAGGTTACAATTATTATACTCAAACGGAATTAGGCAAGAACAGGATATCTACGTTAGACTGATCGACTCGGCCAACAAGCAGGTGAGTGACCCATCCCGTCCAAAACAAAGGCGTTTGTGGTGCAGTGTGTGTAAGTttagcgccgcg
- Protein Sequence
- MQRVHLHNKNNNMLPMAMPRAQLCSSLAILRTNQALKFETMHLDSVRTASFYTVTRSCQDTRQIRRDTFATTRQKPNDDVIEQRETETTRRPDRECEREGQDDRSATAATLPAAVAAPPPSPWAGAVGGVMELEPVWGLGTGLGSGLGSGLGSGLGAGRKLYEAAGHHGMLGHHQGHHLSFGLDHHRDHRDHRDHHRPLKEEPGSRAWMHQPSQEHPSLGLSRAHFEKQPPSNLRKSNFFHFVIALYDRTGQPVEIERTAFVGFIEKEHMEADGQKTNNGIQYRLQLLYSNGIRQEQDIYVRLIDSANKQVSDPSRPKQRRLWCSVCKFSAA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -