Fint003840.1
Basic Information
- Insect
- Frankliniella intonsa
- Gene Symbol
- gata4
- Assembly
- GCA_033675135.1
- Location
- CM066253.1:1913223-1943299[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.36 7.6e+02 -1.2 0.5 5 12 350 357 350 363 0.85 2 3 1.1e-17 2.4e-14 51.6 3.3 1 34 479 511 479 513 0.97 3 3 4.1e-18 8.7e-15 53.0 5.3 1 34 533 565 533 567 0.98
Sequence Information
- Coding Sequence
- ATGTCCTCGGAGTATCTCCACACGTCAGTGCAGGACGACGAGCGTTCCACCACGGACCAAGTCGCCGCTGAGCACGTCGGGGAGCTCGAGCACGCCGAGCACGAGCCGGAGGAGGCCGAGTACTGCGCGCGCGACTTGAGGGTGCTCCACGCCGACCCGGaacaccaccagcagcacgaggacgacgacgaggacgcgaCCGGAGGCCGCTACCTGCTGCTGTCGGGCGAGAGCGTGCTTGTCAACACCTTCCCCACGGAGTTGTACCAGCAACATGACATGCCCGCGTCGCCTCAGCTGAGGGAGCTGCAGCGTCTGCGACCCTCCAGCGCCgacggcaccccgcccgggcccggggacgcccacgcgcacggccaccaccacccggagcaccaccaccatcaccaccaccaccaccacccgcagACCTTCGACGCCGGCGAGCTGGCGGCCACCGGAGGCATGAggcagctgccgcccctgtTCCCCAACCTGGCGGGCGCCACCAGCATGGCGAGCAAGCTCCAGGACGACTACCACCTCGGCTACTCGCCGCTCAGCATGGAGGTGGGCCACCATGTCGACCACCACCACAATGGCCACATGGACGACGTCATCAGCACCCTCAAGACGGAGAAGCACTGCGAGGCGCAGACGAGCGTCGTGGTGGAGAACACGGCGCGCTACCTGCAGCAcaacggccacggccacgaccaccacgtcgactacctgccgccgctgtcggcgcacgcggcgctgcccggccccggcggccacggGTCCAGGGAGGGGTCGccgtcgggcgcgggggaggcggaggacgcGCAGTACGACCAGCTGACCaccctgcagcccggccccaccgtcACCTCGGCGGGCACCTCCTCCCCGGACGACAGCCTGTACGCCGCGCACGGCGTCACCGCCCACGGCCTGACCACGCTGCCACCCTGGTCCGgcctgcaggagcagcagcagcaggccgcgcaccACGCGCTGTCCAGCCCCAACCCGTACCGCGCCATGCAATACTTCCCGGACCCGGCGCACACCACGTCGACGCAGTTATGGAGCACAGCAGCGGACGACTACAGCAGCTCGCTGTCCACCGCCAAGACCCACACAACGCTGCCTGCTTTCAACAGCCAGCGCTTCGGTACGTCGGCCCTGGTCACGTCCCCGCTGGCCTCGCGGGGCAGCCCGTCGTCCTAcagcccgcccagctcggcgTCGTACCTGTGCgcgccggggggcgtggccaCGTCGGCGTCCCCGGAGGGATTGTGGACCCCCACGTACACGGACCCCAGCGCGCTGTACTCGCCGGGGCCTGCCACCCCcaagcgcgcgccgctcgccaccAACCCGGGCTCCGCCTCGGCGTCGCTGTCAGCCAtcGCCGAATATGAGGTCCAGTTCAGCGAGGGTCGCGAGTGCGTCAACTGTGGCGCCGTGTCCACGCCGCTGTGGCGCCGCGACAACACGGGCCACTACCTGTGCAACGCGTGCGGCCTGTACTACAAGATGAACGGCATGAACCGACCGCTGTCCAAACAGCCGCGCAGGATGagcgcctcgcgccgccaggGGCTGTCCTGCTCCAACTGCAGCACGAGGACCACCTCCCTGTGGCGCCGCAATACCGCCGGCGAGCCCGTGTGCAACGCCTGCGGCCTGTACTACAAGCTGCACGGCATCAACCGCCCGCTCGCCATGAAGAAGGACAGCATTCAGAGCCGCAAACGGAAGCCtaagagcagcagcaccaaGTCAGTGgtgccgccgggcggcgcggcggtgtccaGGGCGTCCGCGCTCATCCCCCAGCACGCGCCGCTGACGGTCAAGGGAGACCACGCGTCCGCAGCCGACTCCTACGCGACGCACCACCTGATCAGCGCGGTGAGCAtgggcggcaccgcgccctccCTGGCCAGCTCGCTCGTCACCACCCTGGCTCAGGCCGGCTCGGTGGGGCTGTCGTCGTACTCGAGCCTGttcggccagcagcaccagcaccagcagcaccagcgcggcgtggcgtccagcCCCACCGAGTATCACGGCCACCACTACCAGCACgacggccagcaccagcagcagttcTTCGATTTCTCGACGTCcgcgaccggcggcggccagctgtcGCACAGCCCCGTCGGCGACCTCTCCCCCAAGATGGAgtgcccctcgcctcccgcggagcagcaggcccaccagcaccaccacaaccaccaccaggcccaccagcagcaccatcaccaccaccaccgcagcgccagcgacgACCTGTCGCCGCACATCGTCAGCGTCAGCAAGCTgcacaacaataacaacaacaacaccaacaataataataacaacagcAAGGTGCTCATGATGTCTGTTGAGAGCCTGGAGAGGCCCTCTGTGGTGTCTTCACTGTCTTCATAA
- Protein Sequence
- MSSEYLHTSVQDDERSTTDQVAAEHVGELEHAEHEPEEAEYCARDLRVLHADPEHHQQHEDDDEDATGGRYLLLSGESVLVNTFPTELYQQHDMPASPQLRELQRLRPSSADGTPPGPGDAHAHGHHHPEHHHHHHHHHHPQTFDAGELAATGGMRQLPPLFPNLAGATSMASKLQDDYHLGYSPLSMEVGHHVDHHHNGHMDDVISTLKTEKHCEAQTSVVVENTARYLQHNGHGHDHHVDYLPPLSAHAALPGPGGHGSREGSPSGAGEAEDAQYDQLTTLQPGPTVTSAGTSSPDDSLYAAHGVTAHGLTTLPPWSGLQEQQQQAAHHALSSPNPYRAMQYFPDPAHTTSTQLWSTAADDYSSSLSTAKTHTTLPAFNSQRFGTSALVTSPLASRGSPSSYSPPSSASYLCAPGGVATSASPEGLWTPTYTDPSALYSPGPATPKRAPLATNPGSASASLSAIAEYEVQFSEGRECVNCGAVSTPLWRRDNTGHYLCNACGLYYKMNGMNRPLSKQPRRMSASRRQGLSCSNCSTRTTSLWRRNTAGEPVCNACGLYYKLHGINRPLAMKKDSIQSRKRKPKSSSTKSVVPPGGAAVSRASALIPQHAPLTVKGDHASAADSYATHHLISAVSMGGTAPSLASSLVTTLAQAGSVGLSSYSSLFGQQHQHQQHQRGVASSPTEYHGHHYQHDGQHQQQFFDFSTSATGGGQLSHSPVGDLSPKMECPSPPAEQQAHQHHHNHHQAHQQHHHHHHRSASDDLSPHIVSVSKLHNNNNNNTNNNNNNSKVLMMSVESLERPSVVSSLSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -