Fint003841.1
Basic Information
- Insect
- Frankliniella intonsa
- Gene Symbol
- GATA1
- Assembly
- GCA_033675135.1
- Location
- CM066253.1:1950142-1957108[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5e-17 1.1e-13 49.5 3.3 1 35 583 616 583 617 0.97 2 2 2.2e-18 4.6e-15 53.9 7.2 1 35 645 678 645 679 0.97
Sequence Information
- Coding Sequence
- ATGAGCCGCTCCATCGCCTCACGCCTCACGCTGCGACCGGCGGACCTGGCCAACGGCAGCAGCACGACAGTCCGGGCCGACAGTATGGAGGTGCCCGTCAGCCAGCCCGACGGCGGGGACCTGCCCCAGGAGGCCGACCTgaccgaggaggaggagtcgctggtggccgccgcgcaggccgccgcgcaggccgccgcgcaggccgccgcgcaggacgccgcgcaggacgccgcgcaggccgccgctctgcaggagcagcaggaccagcaggacgaggcccagcaggcggccgcggaggaggcggcggccctgcacaagctgcagcagcagcaggagtcccggcccgccgtgaTCACCCGGCGCAGCAAGATGGTGCGCACCATCACCACGGCGGGGCTCATCACGGAGGCCGAGGCGGAGGACGTTCCTGAGGACGACAAGGCCCAGCAGGACCTGCAGGACCAGGCCGAGGACGAGCGGCGCCAGCCTGacagccccggctccggccccggcccccaggtGGACGAGACCGCGCGcgggcacgcacacgcgcacactcACGGGCACGTCGAGGTCCTGGTGGAGCGGGCGTCCCAGCTAGGCCAGGCCCCCGAGGTGGGGGTGGACGCGCACCCGGAGGAGCAGTTCGAGGTGCGCGACATGTCTGCCATCACcctggacgcgcgcgccgcgcacgagTACAGCTTCCTGACGTCGGCGTCCCCCGGCGAGCGCGTGGTCATGGTCACGGAGCGGGGCTACCCGATGACGGCCGAGGGGCAGATCGGGGGGCAGTTCTGCTACACCATCGCGAGCACGACGCCCATGGCCTTCCACGTTGAGGAGGACAAACTGGACCCTGGCATCGTGATgatgccggtgccggtgtcggcgccggccgagcTGCCCAGGTACCAGCACAtctcgcaggcgcgcgcgcacgccgcgtcgccgcacggccacgcgcccgggccccaccacgccgccccgcagggggccccgccggggccgggggcgctccTGGACCACCGGCGCGCCAGGCAGCAGGCCTTCATGCCGACCTAccaggagcccccgccccaccagctgGACGACGTCGGGGAGGTGGTGTCCgaggcccaccaccaccaccaccagcagctgaGCTACATCGTGTCGCCCTCCCTCAAGTACGagaacgaggaggaggagcaccaGCACCTCATGCCGCTGTCCACGGCCACGTACACCACGCTCgagccaggcggccggccagTGGAGTGCGGGTCGGACGCCGGGTACCAGCGCGCCGTGTACCTGGAGAGcagcggctggccgggcaAGGTGGTGTCGGAGCCGGGCGTGGACGCGCTGGCAGGCGCCACGGTGTACTCGCCCAGCTCGTCGCCCGTGCACCTCAAGGCGGACCCCACGCTCACCTCCACGTCCACCAACTACTCGCCGGCCTACGGCCACAAGCAGCCCATGTACTCGCCCtacctgcaggccggcgccggcgcgcacctGTACGACACCGCCGAGTCGCCCACCTCGCAGGCCGGCATGTACAGCAACGGCGTCACGTCCACGTACTCCGTGTCGCagtcggcgtcctgggcgtccggctcgccgcagcccggcgaggCCTTCGCCTTCCAGCAGTCGCCCGTGCTGtccaccagcgccgcgccctacgCGCAGTACGGCTCGGAGGCCTGGGGGCTCCCCGACGACTCCTACGACCCCAGTCACCTGGAGATGAAGGAGTGCGTCAACTGCGGCGCTCCGCACACGCCGCTGTGGCGCCGGGACACGGCCGGCAACTACCTGTGCAACGCGTGCGGGCTGTACAACAGGATCAACGGCGTCAACCGgccgcccacccggccgcACATCAAGAAGGCCCCCGCTGTCAGCCCCCAGGGCGGCGGTAACAGGAGGACGGGGGTCATGTGCGCCAACTGCAGCACGACGACCACGACCCTGTGGAGGCGGAACAACAACGGGGACCCGGTGTGCAATGCGTGCGGGCTGTACTACAAGCTGCACAACGTTAATCGACCACTCACCATGAAGAAGGACAGTATCCaacagaggaagagaaagcCCAAAAATAATCCTGCGAGTGCGGGCATGAGTCCAACCGTCAAACAGGAGACGAATAAGGCGTCCGGGTCCATGCACCACCAAAAGATGCACATATCGGACGGGTACCACGCGTACCCTGGCAGCCATGCAGGCGgacagccgctgccgctgcagtacGGGTCGGCCGCTGTGCCCTTGCCCGGCGCACCCGCGGGCTACCCGGGGGCCCTGGGGCACGCCCTGAGCCACGggctcggccacggcctcgcgcACGGCCTCGCGCACGGCCTCGGGCACGCCCTGCTTGGGCACGGggaggctccgggcggctcagGCCTACCGCCGCTAGAGCACAGCACTcacccggcgcgcccccccgcGAACGGCTGCTCCTCGGCGCCAAGCAGCGTCATCACCTCGACCGGGCTGCTccccggcggcgagcgcgcgaaCCAGCACgactga
- Protein Sequence
- MSRSIASRLTLRPADLANGSSTTVRADSMEVPVSQPDGGDLPQEADLTEEEESLVAAAQAAAQAAAQAAAQDAAQDAAQAAALQEQQDQQDEAQQAAAEEAAALHKLQQQQESRPAVITRRSKMVRTITTAGLITEAEAEDVPEDDKAQQDLQDQAEDERRQPDSPGSGPGPQVDETARGHAHAHTHGHVEVLVERASQLGQAPEVGVDAHPEEQFEVRDMSAITLDARAAHEYSFLTSASPGERVVMVTERGYPMTAEGQIGGQFCYTIASTTPMAFHVEEDKLDPGIVMMPVPVSAPAELPRYQHISQARAHAASPHGHAPGPHHAAPQGAPPGPGALLDHRRARQQAFMPTYQEPPPHQLDDVGEVVSEAHHHHHQQLSYIVSPSLKYENEEEEHQHLMPLSTATYTTLEPGGRPVECGSDAGYQRAVYLESSGWPGKVVSEPGVDALAGATVYSPSSSPVHLKADPTLTSTSTNYSPAYGHKQPMYSPYLQAGAGAHLYDTAESPTSQAGMYSNGVTSTYSVSQSASWASGSPQPGEAFAFQQSPVLSTSAAPYAQYGSEAWGLPDDSYDPSHLEMKECVNCGAPHTPLWRRDTAGNYLCNACGLYNRINGVNRPPTRPHIKKAPAVSPQGGGNRRTGVMCANCSTTTTTLWRRNNNGDPVCNACGLYYKLHNVNRPLTMKKDSIQQRKRKPKNNPASAGMSPTVKQETNKASGSMHHQKMHISDGYHAYPGSHAGGQPLPLQYGSAAVPLPGAPAGYPGALGHALSHGLGHGLAHGLAHGLGHALLGHGEAPGGSGLPPLEHSTHPARPPANGCSSAPSSVITSTGLLPGGERANQHD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00732361;
- 90% Identity
- -
- 80% Identity
- -