Fint000725.2
Basic Information
- Insect
- Frankliniella intonsa
- Gene Symbol
- kn
- Assembly
- GCA_033675135.1
- Location
- CM066246.1:4509723-4517672[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6e-141 1.3e-137 458.5 18.9 183 536 7 366 3 376 0.84
Sequence Information
- Coding Sequence
- atggccacggccacgctATTCTTCCTCAAGTTCTTCCTCAAGTGCAATCAGAACTGTCTAAAGAACGCCGGCAACCCCAGAGACATGCGGAGGTTCCAAGTGGTGATCTCAACGCAGGTCAGCGTGGACGGCCCGCTCCTGGCCGTGTCCGACAACATGTTCGTCCACAACAACTCCAAGCACGGGCGACGGGCCAAGCGCCTAGACCCCTCGGACGGTGAGCACACAGGCCTgtacccgccgctgcccgtggCCACCCCCTGCATCAAGGCCATCAGCCCGGCCGAGGGCTggaccagcggcggcgccaccgtcATCATCATCGGCGAGAACTTCTTCGACGGGCTGCAGGTCGTGTTCGGCACCATGCTGGTCTGGAGCGAGCTGGTGACGTCCAACGCCATCCGTGTGCAGACCCCTCCGCGCCACATCCCCGGCGTGGTGGAAGTCACCCTGTCCTATAAATCAAAACAGTTCTGCAAAGGCGCTCCGGGCAGATTCGTCTACGTCTCACTGAACGAGCCGACCATCGACTACGGGTTCCAGAGGTTGCAGAAGCTCATCCCCCGGCACCCGGGTGACCCGGACAAACTACCCAAGGAGATCATCCTgaagcgcgccgccgacctggccgaggccctgtaCAGCATGCCGAGGAACAACCTGCCGctgtcggcgccgccgcgctccccgggcAGCATGGCCTCCAGCAACGGCATGAGCTCCGGCTTCAACTCGTACTCGGGCCAGCTCGCCGTCAGCGTCCAGGACACCAGCGGACACGGTCAGTGGAGCCAAGACGAGTacggagggggccgggggcagggctcgagcgccgcctccacgccgcacTCCACCACGggggggccgcagggggcggcgggggcggcgggggccggcgctgcgacCGCCGCCTCGAGTTACGCGTcggcaccgggggcgggcgccgggggcggcgcggccggggccgccatgggggcgggggccgccacccccggctaCGCCACCGCCTCCACGCCCCAGCTCACCAACCTGGGCTGTCCGTCCGGCGGGCTGTTCGGCGCCTCCACCAAAATGGGGAGTTTCTTCTCGTCATCGTTCTCCTCCATGAACCCCTTCACCCTGCAGACATGA
- Protein Sequence
- MATATLFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVSVDGPLLAVSDNMFVHNNSKHGRRAKRLDPSDGEHTGLYPPLPVATPCIKAISPAEGWTSGGATVIIIGENFFDGLQVVFGTMLVWSELVTSNAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPDKLPKEIILKRAADLAEALYSMPRNNLPLSAPPRSPGSMASSNGMSSGFNSYSGQLAVSVQDTSGHGQWSQDEYGGGRGQGSSAASTPHSTTGGPQGAAGAAGAGAATAASSYASAPGAGAGGGAAGAAMGAGAATPGYATASTPQLTNLGCPSGGLFGASTKMGSFFSSSFSSMNPFTLQT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00151285;
- 90% Identity
- iTF_00732410;
- 80% Identity
- iTF_00732410;