Fint002516.1
Basic Information
- Insect
- Frankliniella intonsa
- Gene Symbol
- ATFC
- Assembly
- GCA_033675135.1
- Location
- CM066249.1:14866867-14872845[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.6 5.1e+02 -0.3 0.0 40 53 202 215 197 220 0.73 2 2 8.1e-13 6.9e-10 37.7 11.7 2 62 315 375 314 378 0.96
Sequence Information
- Coding Sequence
- ATGAAGTGCAGCTACCACTACACGTGGAACAAGGAGATCATCGTGAACTCTCAGAACTGCGTGACCGTTGAACCCTTCCCAGACTGGTATGAAACGAAAACGGACCACGCCATCTTCGAGGAGCTGCCGTCGCCGACGCCCTCCCTGTCCCCCAAGGATgaggcgggccccggcgcggcgccgcgccccttcgCCGGGCTGTGCATGCCGCTGCCCATGACGGGCGCGCCGTACGCCGTGGCCGCCACCCCCAGctaccccagcccggcgccgctccagggcgccgccgtgctcctgcccctcaccaccgtgcaccaccaccagcaccagcagcagcagccggccgccgcgttcCTGCACCTGGCCGCCAACCACCTGGCCGCCGGCAGCCCGGGGCTCCTGACCaccgtccagcccgcccccgcccccgcccccgccgacacTCAGACGCTGCTCCAGGAGTTCGAGAGCGTGTTCGACAAGGtggagcggcacggcggcgcgctcacgcccccgcaGAGCCCCCCGCACGACATCATCACCCAGAGCCACCCCGTGTACTacccgcagccgccccagcAGCTGTTGCACTTCCCCgatgtgcagcagcagcagctgatcCGCGAGGTGGACGAGCTGGTCCGCAGCCGCgtgcagcaggacgaggaggccTCGTGgctgccgctcgcgccgcccagcccctgcaccagctccaacagcagcagcagcaggagcagcttCTCGTGCGccgaggccgacgccgactcccccgcgcccgcctcgcccgagaCCGACGACCCCGAGTGGCTGCCCGGCGGCCTGTCCGTCGGCAGCCCGACGccgcccaccagcagcgccgaggcgtcgcccgcgccgccgggcaagGCGCCGTCCAGCAggaagcgcggcgccgccaagcGCAAGCCGTACGCGCACAACGTGGAGGACAAGCGCATGCGCAAGAAGGAGCAGAACAAGAACGCCGCCACGCGCTACCGCATGAAGAAGAAGGCCGAGGTGGAGGAGATCCTGGGCGAGGAGAACGAGCTCAAGCGCAGGAACGACGAGCTGCAGGACAAGGTCAAGGACCTGTCGCAGGAGATCCGCTACCTCAAGAACCTGATGCGCGACGTGTTCCGCGCCAAGGGCCTCGTCAAGTAG
- Protein Sequence
- MKCSYHYTWNKEIIVNSQNCVTVEPFPDWYETKTDHAIFEELPSPTPSLSPKDEAGPGAAPRPFAGLCMPLPMTGAPYAVAATPSYPSPAPLQGAAVLLPLTTVHHHQHQQQQPAAAFLHLAANHLAAGSPGLLTTVQPAPAPAPADTQTLLQEFESVFDKVERHGGALTPPQSPPHDIITQSHPVYYPQPPQQLLHFPDVQQQQLIREVDELVRSRVQQDEEASWLPLAPPSPCTSSNSSSSRSSFSCAEADADSPAPASPETDDPEWLPGGLSVGSPTPPTSSAEASPAPPGKAPSSRKRGAAKRKPYAHNVEDKRMRKKEQNKNAATRYRMKKKAEVEEILGEENELKRRNDELQDKVKDLSQEIRYLKNLMRDVFRAKGLVK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -