Ffus011780.1
Basic Information
- Insect
- Frankliniella fusca
- Gene Symbol
- Zmiz1
- Assembly
- GCA_029379305.1
- Location
- JAHWGI010000874.1:163962-171028[+]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.15 1.6e+03 -0.3 0.9 4 24 675 695 672 700 0.88 2 2 3.9e-26 4e-22 78.5 4.8 1 50 760 809 760 809 0.98
Sequence Information
- Coding Sequence
- atGTCatccggccagcagcagcagcaacagcagcagcaacagcagcaacagcaacagcagcagagccagcagggccagcagggtccTCAGCCCGGCCAGCAGAGTCAGCAGGCCTACTCCTCGGCGGGCATGGTggccaccgccacgcccaccTCCACCGTGGCCGCCATGCAGCACGACAACTCCAACCAGTTCTCGCAGATgggccacggccccggcggaCCCCAGCAGTACTACGGCGCGCGAAGCCACATGGGCATGGCCAACATGGGCAACATGAACGGCATGAGCCCCATGAACTCCATGGCCCAGATGGGGATGATGGGCCAGCACGGAAACATGATGGGCAACATGAGCAGCATGAACAGCATGGGGAGCATGGGCCCCGGTATGAGCAACATGAACCACATGGGCATGGCGCCCAACGGCAACATGAACCACATGGGCATGAACAACATGAACAGCATGGGCATGGCGCCGAACATGGGCAACATGAACAATATGAACAGCATGAACAATATGAACAACATGAACAGTATGAACAACATGGGCCCTGGTGCCATGAACAAGATGGGCATGCAGAATCAGATGTATCCCCGAAGACTTGCACCGTATCCAAGCCCAGCCATGCACATGTCTCAGAAGAGGCAAGCCCCGGCGTACCCCACCGGCCAGCAATACCCAGGATACACAGGGAGGCCCAACTTTCAGGGGCAATACCCCCAGCAACCCATGGGCCCTGGAGGCAACATGGGCGTAACGGGAAACATGGTACCCAACGCCAGTATGGGACCCAACGCCAGTATGGGGCCTAACGCCGGTATGGGACCAAACTCTGGTATGGGGCCAAACAGCGGAATGGGACCAAACGCCGGTATGGGACCTAACTCTGCCATGGGGCCGAACGGTGCCATGGGTCCTAACTCTGGAATGGGGCCCAACTCCGGCATGGGACCGAACGCCGGCATGGGACCCAACGCGGGTATGGGATCCAACACCAGTATGGGGCCAAACCCCGGCATGGGGCCTAACTCAGGCATGGGACCTAATGCTGGAATGGGACCTAATGCTACCATGGGACCCAACGCAGGCATGGGGCCTAACGCTGGTATGGGTCCCAACGCCAATATGGGACCCAACGGGTCATTCCCCAACGCGGCAGTCCGGACCGTGAGGCAGTCCACTCCGCCTTACACCTCAGCTAGTCAAGGAGGCCACCAGTACTTCAGCAGTGGCAACAACCTCCCTTACATGAACCACCACAGCGGCAGCTCGGCGCAGACCTTCCCCAGCCACCACCAAGgacccggcgggccgggcagttacggtggcgctggggcgggcggaccggcgggcggcggtggcacTTCGGTCGGAGCTAGTACGGTCGTGCCCGGGCCGTACTCCGGCGGAGTGGCGACAGGGGCAATGAGTTACCAAGGGAATGCTGGAGGCAACAACCCCGGTGTGGGGTCCGGTGCTGGAGTCGGAGGgcccggggtgggccccggcGTGGGACCCGGTGTAGGCCCCGGGGGCGTGcctggcgcggggcagggccctgCCTCGGGCGGCCCCGGACCGTACACTACAGGCTCGGGTGCTATGAACTACCAGCACAGCCCAATACCTGGCAATCCCACCCCACCACTCACACCCCAACACCCGGGCTCCATGCCGTACGCCAGCCCGGGCGGTGGGGATGTGAAACCGACGTTACCCATTCAAAagGATGATGAGCTAAGGCTTACATTCCCAGTGCGAGACGGTATTATTCTTCCACCATTCCGTCTGGAACACAATCTTGCTGTTAGCAATCATGTTTTCCAATTAAAACCCACTGTTCACCAAACACTCATGTGGAGGTCAGATTTAGAATTACAGTTAAAGTGCTTCCATCATGAAGATCGGCAAATGAACACAAACTGGCCGGCAAGTGTGCAAGTGTCTGTGAATGCAACCCCTCTTTCAATTGACCGAGGTGAAAATAAAACAAGTCATAAACCATTATACCTAAAAGAAGTCTGTCAGCCTGGAAGAAACACCATTCAAATAACTGTGTCAGCATGCTGTTGTTCCCACCTATTTGTTCTTCAATTAGTACACCGCCCAAGTGTTAGAAGTGTACTCCAAGGGCTGCTAAGAAAACGCTTGCTGACAGCAGAACACTGTATTTCTAAAATCAAACGTAATTTCACAAATGGGGGAGGTGCAGCTGGTACAGGCGCTGGTTCTTTGTGTTCTGACAGAGATGGTGTGGAACAAACTGCTCTTAAGGTGTCATTAAAGTGTCCCATAACATTCAAACGTATCACATTACCAGCTCGTGGCCATGATTGCAAACATATTCAGTGCTTTGATCTCGAATCTTATTTACAAATGAATTGTGAAAGGGGCTCATGGAGATGTCCAGTTTGCAACAAACCTGCCCAGCTGGAAGGCCTAGAAGTTGACCAATATATGTGGGGCATTCTAAATACTCTTAATTCATCAGAAGTTGATGAAGTGACAATAGATTCAGCAGCAAATTGGAAACCTACTAAGAACCTACAGCCTGGTATTAAGGCTGAGGAGGGAGAAGGTGATGGATGTGGAGCCAAGAGACTGGGTAAAGCTGTGTCTCCAGGCAGTATGACTTTACCAACCATGAATAACTGGGATAATACACAAGCAATGTCGCCTTATTTACCACCAGACATGAATAGTATAGCTAGTGGATCCATGATGAGCAATAATTCTTCTTTCAACAATACTAATTTGCAAAGAGGTTCTGGTGGTCCTTCAAGTGGAAGTGGTCCTGGCAGTAACTCTTATGATTATAGCGGAAATGGCTCAAATAATCCAGGAAGCAATGAGTTCAATAGTCCTAGTGGACCATTGTCACATCTAAGCGAATCGGTCAATTCCCTAGATCCCTTAAATGCTATGGAAAAGAGCTTAAGTGAACAAATGCCTCATACACCTCATACACCTCACACCCCCCACACTCCTCATACTCCAAATGGCCCGCCTAGTGTTCCCCCTCCTGGCTCAGTGGACAACACATCTAGCACAGCAAATAATAGTGCCAATAACTCAGCAACAACTCTCACAGATGCTGACATTCCGTCAGATCTCAATTTTGATCCAGCAGCAGTTATTGATGGAGAAGGAACAGGACAGGAAGCTCTGAATCTTCTTCCAGACAGTATGGTGGACCCAATGGAGTTATTATCGTACCTGGACCCGCCAGACCTGGCGACACCACCCTCATCTGGTGCCAGCAGTAACGGCAATAATGTCAATACAACTTCTGATGACATTCTGGCACTATTTGAGTAG
- Protein Sequence
- MSSGQQQQQQQQQQQQQQQQQSQQGQQGPQPGQQSQQAYSSAGMVATATPTSTVAAMQHDNSNQFSQMGHGPGGPQQYYGARSHMGMANMGNMNGMSPMNSMAQMGMMGQHGNMMGNMSSMNSMGSMGPGMSNMNHMGMAPNGNMNHMGMNNMNSMGMAPNMGNMNNMNSMNNMNNMNSMNNMGPGAMNKMGMQNQMYPRRLAPYPSPAMHMSQKRQAPAYPTGQQYPGYTGRPNFQGQYPQQPMGPGGNMGVTGNMVPNASMGPNASMGPNAGMGPNSGMGPNSGMGPNAGMGPNSAMGPNGAMGPNSGMGPNSGMGPNAGMGPNAGMGSNTSMGPNPGMGPNSGMGPNAGMGPNATMGPNAGMGPNAGMGPNANMGPNGSFPNAAVRTVRQSTPPYTSASQGGHQYFSSGNNLPYMNHHSGSSAQTFPSHHQGPGGPGSYGGAGAGGPAGGGGTSVGASTVVPGPYSGGVATGAMSYQGNAGGNNPGVGSGAGVGGPGVGPGVGPGVGPGGVPGAGQGPASGGPGPYTTGSGAMNYQHSPIPGNPTPPLTPQHPGSMPYASPGGGDVKPTLPIQKDDELRLTFPVRDGIILPPFRLEHNLAVSNHVFQLKPTVHQTLMWRSDLELQLKCFHHEDRQMNTNWPASVQVSVNATPLSIDRGENKTSHKPLYLKEVCQPGRNTIQITVSACCCSHLFVLQLVHRPSVRSVLQGLLRKRLLTAEHCISKIKRNFTNGGGAAGTGAGSLCSDRDGVEQTALKVSLKCPITFKRITLPARGHDCKHIQCFDLESYLQMNCERGSWRCPVCNKPAQLEGLEVDQYMWGILNTLNSSEVDEVTIDSAANWKPTKNLQPGIKAEEGEGDGCGAKRLGKAVSPGSMTLPTMNNWDNTQAMSPYLPPDMNSIASGSMMSNNSSFNNTNLQRGSGGPSSGSGPGSNSYDYSGNGSNNPGSNEFNSPSGPLSHLSESVNSLDPLNAMEKSLSEQMPHTPHTPHTPHTPHTPNGPPSVPPPGSVDNTSSTANNSANNSATTLTDADIPSDLNFDPAAVIDGEGTGQEALNLLPDSMVDPMELLSYLDPPDLATPPSSGASSNGNNVNTTSDDILALFE*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00733681;
- 90% Identity
- -
- 80% Identity
- -