Ffus005701.1
Basic Information
- Insect
- Frankliniella fusca
- Gene Symbol
- gata4
- Assembly
- GCA_029379305.1
- Location
- JAHWGI010000293.1:645633-655781[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.3 1.9e+03 -0.7 0.6 5 12 9 16 9 22 0.87 2 3 7.4e-18 4.6e-14 52.5 3.3 1 34 138 170 138 172 0.97 3 3 2.7e-18 1.7e-14 53.9 4.2 1 34 192 224 192 226 0.98
Sequence Information
- Coding Sequence
- ATGCAATACTTCCCGGACCCAGCGCACACCACGTCAACGCAGTTATGGAGCACATCAGcGGACGACTACAGCAGCACGCTGTCCGCCGCCAAGACCCACACAACGCTGCCCGCTTTCAACAGCCAGCGCTTCGGCTCGTCGGCGCTGGTCACGTCTCCGCTCGCCTCGCGGGGCAGCCCGTCGTCCTACAGCCCGCCCAGCTCGGCGTCGTACCtgtgcgcggcggggagcgtggTCACGTCGGCGTCCCCGGAGGGGCTGTGGACCCCCACGTACGCGGACGCCAACGCGCTCTACTCGCCGGGGCCCGCCACCCCcaagcgcgcgccgctctccgccAACCCGGGCTCCGCGTCAGCGTCGCTGTCAGCCATCGCCGAATATGAGGTCCAGTTCAGCGAGGGTCGCGAGTGCGTCAACTGTGGCGCCGTGTCCACGCCGCTGTGGCGCCGCGACAACACGGGCCACTACCTGTGCAACGCGTGCGGCCTGTACTACAAGATGAACGGCATGAACCGACCGCTGTCCAAACAGCCGCGCAGGATGagcgcctcgcgccgccaggGCCTGTCCTGCTCCAACTGCGCCACGAGGACCACCTCCCTGTGGCGCCGCAACACGGCCGGCGAGCCCGTGTGCAACGCCTGCGGCCTGTACTTCAAGCTGCACGGCATTAACCGCCCGCTCGCCATGAAGAAGGATAGCATTCAGAGCCGCAAGAGGAAGCCcaagagcagcagcaccaagtCAGTGGTTCAgccgggaggcgcggcggtgtccAGGGCGCCCGCACTCATCTCTCAGCACGCGCCCCTGACGGTCAAGGGAGACCACGCCAGCGCAGCCGACTCGTACTCGCACCACCTGATCAGCGCGGTGAGCATGGGCAGCACCGCTCCCTCGCTCGCCAGCTCGCTCGTCACCACCCTGGCCCAGGCCAGCTCGGTGGGGCTGTCGCCGTACTCGAGCCTGTtcggccagcagcaccaggcgcagcaccagcagcaccagcagcaccagcgcggcgtggcgtccagCCCCACGGAGTACCACGGCCACCACTACCAGCACGACGGCCAGCACCAGTTCTTCGACTTCTCGTCGTCCGcgaccggcggcggccagctgtCGCACAGCCCCGTCGGTGACCTCTCCCCGAAGATGGAgtgcccctcgccccccgcggagcagcaggctcaccagcaccaccacaaccaccaccaggcccaccagcagcaccatcaccaccaccaccgcagcgCCAGCGACGACCTGTCGCCGCACATCGTCAGCGTCAGCAAGctgcacaacaacaacaacagcaccaataataacaacaacaccaaTAGCAAGGTGCTCATGATGTCCGTTGACAGTCTGGAGAGGCCGTCTGTGGTGTCTTCAATGTCTTCATaa
- Protein Sequence
- MQYFPDPAHTTSTQLWSTSADDYSSTLSAAKTHTTLPAFNSQRFGSSALVTSPLASRGSPSSYSPPSSASYLCAAGSVVTSASPEGLWTPTYADANALYSPGPATPKRAPLSANPGSASASLSAIAEYEVQFSEGRECVNCGAVSTPLWRRDNTGHYLCNACGLYYKMNGMNRPLSKQPRRMSASRRQGLSCSNCATRTTSLWRRNTAGEPVCNACGLYFKLHGINRPLAMKKDSIQSRKRKPKSSSTKSVVQPGGAAVSRAPALISQHAPLTVKGDHASAADSYSHHLISAVSMGSTAPSLASSLVTTLAQASSVGLSPYSSLFGQQHQAQHQQHQQHQRGVASSPTEYHGHHYQHDGQHQFFDFSSSATGGGQLSHSPVGDLSPKMECPSPPAEQQAHQHHHNHHQAHQQHHHHHHRSASDDLSPHIVSVSKLHNNNNSTNNNNNTNSKVLMMSVDSLERPSVVSSMSS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -