Basic Information

Gene Symbol
-
Assembly
GCA_029379305.1
Location
JAHWGI010000014.1:156442-164334[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.56 48 5.5 0.8 2 23 1783 1804 1782 1804 0.95
2 17 2.7e-05 0.0023 19.0 0.2 2 23 1812 1834 1811 1834 0.95
3 17 0.48 41 5.7 4.0 1 23 1874 1896 1874 1896 0.97
4 17 1.4e-05 0.0012 19.9 2.7 1 23 1904 1926 1904 1926 0.98
5 17 0.026 2.3 9.6 0.4 1 23 1936 1958 1936 1958 0.98
6 17 0.0005 0.043 15.1 3.4 1 23 1965 1988 1965 1988 0.97
7 17 0.0087 0.74 11.2 3.5 1 23 1993 2015 1993 2015 0.98
8 17 6.1e-06 0.00053 21.1 0.4 1 23 2021 2043 2021 2043 0.97
9 17 1.2e-05 0.001 20.1 1.4 1 23 2049 2071 2049 2071 0.99
10 17 0.13 12 7.4 2.9 1 23 2079 2101 2079 2101 0.97
11 17 0.24 20 6.6 0.1 1 20 2123 2142 2123 2145 0.92
12 17 0.00082 0.071 14.4 0.4 2 23 2162 2183 2161 2183 0.96
13 17 0.00017 0.014 16.5 0.4 1 23 2189 2211 2189 2211 0.98
14 17 3.6e-05 0.0031 18.7 3.2 1 23 2217 2239 2217 2239 0.98
15 17 5.3e-06 0.00046 21.3 1.6 1 23 2245 2267 2245 2267 0.95
16 17 0.08 6.9 8.1 5.8 1 23 2273 2295 2273 2295 0.98
17 17 0.17 14 7.1 2.2 1 23 2301 2323 2301 2323 0.88

Sequence Information

Coding Sequence
ATGTCAGGAGACAAAATTTTGATCACAAATGAAGATATGAGTGCAAAAGAAGATCATAATGTTCCTGAAGAAACACTAGTCTATCAGGATATCCCATTCTCAGGAAGTCCTTCTGCCACCGGCGACAAAACTGTTGATGACATTGAGGGTGATTCTGTTGGCACAAGCAAACAGGTCCCCATTCCAGACGGGTCCTCCTCTGATGTATCAAGAGTTGGCGTTTCTGTCATTGCAAGCACAGCAGAAGCTGAGGCTTACCTTTACTCTGAGACCAATCAGAGTGGTGTCCTTGAATCTGTGAATGAACTAGATAATGCCCAGTCCTCCTTGGCTGCAGAGCAAGTGTTTGATATGACTTCAGAAATCAAAGGTGAACTCACTTCAGGCCTAGAGATTGTGGAAAGTAATGAGCAAGAGTCCTTACATCACATAGAATCCTTAGGACAACACACAATGGAAGGTATTGAGGACTCAGGTGGCTCTGATAGTTTTGGAAAGAGTAGTGAAGTCGTTCAAAGTGAGTGCCATCAGGAAATTGAGGTAAATAAAACTGGAAATATTGATGGAGAAGAATTTTACGAAATGCAAGTTGCTGAGAGCCATCTTGTTAGTGATAGTCTGGAGATCAATGAAAATCATGATTCTTCAGAGATTACGGAGAGTCACTCGTTAGACAGATCTGAGGAAACTGACAAGACCCATGCAGTTGATGATGATCAAGAACTTTATGACAGACAGGTCATCTATGAAATACAAGAAGAAGATGTTAGTCAAGAAGGAGATGAAATTCAAGAAGGTGAGATGAGTCAGGAAGTGTATGAAATTCAAGAAGTGGATGAGGTTCAGGAAATGGGCGAGGTTCACGAAGTGAATGAGGTTCAGGATGTGGACGAGGCCCTAGAAGTGGACGAAGTTCAGGAAGTGAACGAGGCTCACGCAGTGGACGAGGCCCTGGCAGTGGATGAGGCCCAGGGCGAGGTTCAGGAAATAGATGAGATTCAGGATGTGGACGAGGCCCAAGATAGGGAGGAGATCCAGGAAGAGCATGAAGTTCAGGATGGGGAAGAGATCCAAGAAGGTGATGAAATTCAAGAAGGATTTGAAATTTATGAAGCTGGAGATGTTTATGAAGGAGAAGAGgttcatgatgatgatgagagtCAAGAAGAGAGTGAAATTCCTGAAGACCATATGAGTGAAGGTGCTTCTAGTCAAAGTGCCAGTGATAGTCAAGATAAACATAAAAATTTTGAGGCTCAACACTgtgaaaatgaaacaaatgaAAATGAAGAAGTCAAGCAAGTCATGGAGATGAGTAAAACAGAGGTTGCTGATTTACCCATGGACGTGGATGAAAGTCAGGATGGTGATGAAAGTCAGGATGCTGAAGAAAGCCTAAAAATAGATGAAAGTCAAGAAGTCAGTGAAAATCTAGAAATTGATGAAAGACATCAAGATGGCAGTTCACAGGAAGTAGAATCTGAAGCTCCCAAACAACAGACTGCTGTGGAAGATGAAATGATAGATACTTCTCCCTCTGACCCAACTACAACAGACCCTCAAAATTCATCTGTGCACACTGCTCTAGAGGGGAGGGAAGCTAATTCTGCAGATGGCGTTAGTGCCATAGATGAGGAAGCGCCTTCCCAATGTCAAAGCCATACATCCAGTATCAGTGATGATAAGAAGAGTGCTGAAACATTTAAGAAAAATGATGTTGAGGGAATGAAAGTTGAAAATTCTAAGCTATCTGAAATTCATCCTCAAAATAATGTCATTTCAAATGAAATTTTATCTGAAGATGGGCCTGAAAATTGTAGTGTTGGGGGTTTGGAAAGAGGGGAGGAAGAAGATGACATAACAGAAGATGGAGAGGAAGATGTTGGTGAAGGTGATATAGAGGATGATGGTGAGGGAGAAGATTTTGTTGGCGATGAGGAAGATTTTGAGGATGGAGATGACATGGCTGATGAAGTTGAAGTAGAAATAGAGGATTGCTCTGATCCAGAAATGGAATCAGAAGGTGGTGTAACGTACATCATTAGCGAAGGAATGATAGTTGTTGAGGAAAATGAAAGTTCTGAGGCGTTTGCCACAGATCAAACGGttgTTTCAGCAGAAGAGGAAAATGTCCATAGTGATGATCAAACAGGGAGTCCGCAGAAGACTACCCGAATTATTATCAAAATGCCACCTTCCAAAAGTAATGCCAATGAAGAGGAAGCTGAAGTAAGGGTTTCAAATCAGGATGTCCTAGAAGCAACAAAATCTGCCAGAAACTCCCCAGCGTCTGAACAAACTTCCAGTTCTGTTCTAGAGGAGGTATCAGATACTGACAGGTCTTGCAGCAAGAAAGCAGTGATTCCCTCTGCAAATGAAAATGAAGCTCCAGTTTGTGCACCAGAAATGCCCGTGAAGGTTGACGAATTAGAAAAACCTAGCAATGTTTGTATGACAGAGATTGTTGAGACTTCAACAAATAAATCAATTACCTCAAGCTCTATTGAGAAAACAGTGAAACGTGAAAAATCAAACAGGAGTGTGTCTTCAAATGTTAGCCAGATTTCTGGATCAGATGGTAACAAAACTGAAGAGTCCAAAAATGCTGTTGCTTCTGAGAAAACTGAAGCTAGTCTACTTCTTGCTAAAGAAACTCATACAGAACCCGCCAAAGAGCAAGTTGAATCATCAACAGGCCAACAAAAATCTGATCCTGGACCTCAACAAAGGagtttgaaaaatgaaaagttgtctGGAATTGAAACTACTGAGCAGGAGAAGGCATCAAAGGTTGCCCAGCAGACATCCACTTCTAAAAGTAACAAGCCAGTGGAAAAGTCATCAACAAGAAGTGTTGTGTCCTCCAAAGCCCAAGCAAAGATCCCTAAGGTCATTGACGGGAACAAGAGTGAAAAAGTTCAAAAGGAGCCATCTAAAGAAAAGCACACCCTAGGTGCTAAGGATATTTCAAAGCACAGCCACAGTGCTCAGAAACAGAAGAGCATTAGAAGCAGTACAGAGGAGAAGACACAGGGCCCAACAAGAACTTCAAAACAAGAGATGTCATCCAAAGATGAACGATCCTCCAaagcagaaaataaaaaacaatcaGAGTCTAAAGATGTGACTCGTTCAGCTCAGAGTGAGGTTCAACACAGCAGTAAGGCCCTTCCCAAACAGCCAGTTGTGTCAAGCCATCGGACACGATCTAATTCAACTTCAACAAAGGATTCTTCTgtcaaagagaaagaaaagaaagtatCTCGTAATGATGAGGTTTCTGAGAAAAAACTTGCTACGTCTGATGAACCAACCCCTAATAAATCAAATTCTGAACCCAAGGTGGCTCTACGAAGTAGCAGATCTCGTAAATCTCAAACTGAAAGCACTGCCACAAGTAATTCTGAAGAACCTGTAAAGAAGTACAGGGCTAAACCTATCACTGAGACCCTTCCGAGGCCTCGTCAAAGTGAGCGGGTTTCAAAGGCAACAGAAAAGGCAATTGCTTCTGGTCTTATTTCTAGAAGATCCAAACCACCTGCCCCTGACAACAGTTGCTCAGAAACTCATGAAAAGTCATCTGATTTAAGCTCTGAAGATCAATCTGCATCTCAGAGAAGGAGCAAAAGGAAAGCTGACTTGTCACCTCCTGCTAGTAAAGAGGAAACTCCTGTGAGTAAACGTCGCACAACAAGGAGTGGGGATGCCCAGCCATCAGAGGAAACAACCCCATCAACTCCTCAAGCTGTAAGATCTGCCCGTAAAAGCAAAAATCTAAAGAGGAAAGGTTCAAGCCCTGATGTgcCTCCTGCCAAGCAGCCTCACACTGAAGAGACATCGCCCAAAGACAAAGATTTAGAAGAATTTGTAGCCAATATTTCTAAAATGTGCCGAATATGTGGATCAAAGAATGATAATCTGTTGAACGTCTTTGGTCCTGAAGGGCTCACTATGCAACTTTCAGAGAAAATTCATAATATTCTCCCTATTAAAATACGAGCAGAGGAGCCCTTACCCTCAGGAGTCTGTCATCCTTGTGTCGTTACACTGATGGCTTGTGAGAAGCTTGTTGAGAAGTGCTCTAGTATTGATAAACGCCTCCGTGTCCACTTCAAGTGCCCCACTGAAATTGTGCAGAAAGACAAAACAACTCAGTTGGAAGCGCCCTCCTCTCAAACACCTGAGAAAGCAGTCAAAGGTGCCGCAACTGCGATGGTGAATGTTGATGAAAAGTCCAAAGATACTGCTTTAAAATCTTCTGAATTACCCGAGAAATCAAAGGATTTGACCTCTGATCCATCTGATGTGACCCCATCATCTGTGTTGGCCCCAGATCTTGAAGAAACAAGTTTGAAGTCTACTGAAGGATCTGTTACTCCTGCAGAAAAGTCAACTCCCTCACAGAAGCATGGACAACCTACTAGGTCTTCATCAAGAGTTTCAGCTAAGGATAAGCAGTTTAAGAAGGGCAAAAAGTCATCAAATGAGCCATCTAAGCCAACAACCCGATCAAACAAGGAAACTGGAATTGCAGGAAAATCCAATGCAGCACGGAACACAGAAACAGAAGATTCCCCACCGATCCTGGAGGCTGAGCCTCCACAGTCAGTAGAAGCAGCAAACCAAGAGCCACTGTCTCAGCCTCCCATTCTCATACCCCAACCGGCCAAGCCTTTGCCTGGGTTAGTTCCAATCCCTGCTGAAGATCCTAGTGCAAAACGGTTTGGCAACACCTATCGAGCCCGAATGAAACCTGGGCAAtgggaaaaaattgaaagaggTTTGGAAGCTATTCATGGGGAAGCTCCAGAAGATGAACAGGAAGAAGGTTCATGTGATGTTAAACCACTCACTGGTGCTCAGGCAGAGGAGTTCCACATTGTGGACCTTGATATGAACATGGAAGAAGTACAACCAGGGTCAGCACCGGGAGCTGGAAAATCGAGTGTCGAGTCTATTCATGTAGAAATACCACCTGAATCGGCGGAAGAGGAAACGGCTGCTCAACAAGCTAGCCCAAAGAGTGTCGTTGACAGCATTCTTGTTGATTGGAGTGGTGACGAAGAAGAGGTAGTAGCCCCTGCTCCGAAAGGCACTGCTGTCAGTCAAGCAAGAAGAGTCAATGCTGCTGGAAGTGGAAAAGATAATGTTAATGGTAGAGTACAGAGAATTGAAGCATTGCCTGCCCCTTGTCTATTTGCTGATGATGAGGGTGTGGAAAATTTGCCACAAGTCAAGTCGAAACCTACCACTGTTACAATTAAAGAAGAGTCTTTCTGGCCTGAACCTGCTCCTGGCACCTCAACATCATCAACCTCAGAGGTCCCTTCAAGTGATGTTCCTTGGAAGTGCTTTGTGTGTGGCAAACGTGGGAAGTCTCTACCAAAATTCCTTGAACACAAGAAACTGCACTTAAATGATAGAAAGCTTGTTAGCTGTCCAAAATGTAGTGAAAGCTTCAGTAATGCAGGTCTTTTGAAAAATCACATGAAAGCTCTTCATGGAGATGACGATGAAGATGACGTAGTTGAACAGCAACCAAGGGTCAGCAGTCGCCGGAGAGGTAAACAGCAAGACACAGTTGTTGATGCAGACTTCTCTCCTGCATCAGATGGTCTTTATCATTGCAGCTTATGTCAGAGTGCATTTACAAGTATTGAAAGCCTATGCCAACATAAAGTAACTCACCAGAAAACTGAAATTGATGTTTTTAAGTGCAATGTCTGTGGAAAAGTTTTCAATCGCTACAATGAATATCAACACCATTTGGCAACCCATCAGACTGGAGCTCAAAATATTAATATGTTTCAATGTGGTAAATGTGATATGAAAATGGCAAATCAGAAAGAGTTCATTGATCACATTAATTCCCATTCCACTGAGCAAACAAGCTTCACTTGTGATCAATGTGAAAAGATATTTGACACAAAGCATAAACTGAGGAGTCACAGAAGCACTGCCCATAAATCTACAGCATATGCATGCCATTTGTGTGACAAAGTTTGTCAGAAGAGaaTAACATTGATTGAGCACTTACGTAAACATACGGGAGACAATCCTTTTGCGTGTCCTGTTTGTAATAAGAGATTCAATCGCTTAGCAAACTATAAGGCTCATATGACAATTCATGAAAATGCTCGCCGTTATGAGTGCCCATATTGTGGAAAACGCTTTAATCGTCAAAGCATTCAACAACGCCATATTAAAACCCACACCACCGAGCAGTCAAGAAAGCATCGCTGCAGAGTTTGTAATCTCACATTTAATTTGGCCACTGAAATGTTTACTCACCGACGGCTTCACACTCGAGATGAGGTAGAACGGGCTACTTGGGAGGATGAGAAACAGCGTTTAGCTCTCACATCCTTCCCGTGTAAAGTTTGTCAGATTCCCTTCAATACAGTTGAAGAGGTTCTTACACATATGCCTTCGCATACAGATGAAGAGCGAGATATTGCTGCAAAGCTTATCAATCCTAAACTGGAATGTGACATTTGTGGTAAAGTTTTGAACAGCAAAAGAACTTTTAATGCTCATCGTTCCTCTCATATTGATGGGAAACCATTTGTGTGCAAAATCTGTTCCAAAGGGTATGCCACGTCCACTGGTCTGAACTATCATATGCTGTCGCATACTGGAGAAAGGCCATACCCTTGTACGTTTTGTCATAAGGGATACAAAAATAGCACTGATCTAAAGGTTCACATGCGCCAGCACACAGGTGAATTCCCATACAAATGTAACAAGTGCAACAAAGCTTTCCGATCTGCTTCAAGTTTGCAGAAGCATGGATTTGTTCATTCAGAAGTCAGACCTTTCAAGTGTAGATATTGTAATATGTCGTTTAAAAGGGAGACTACTAAGCATAATCATGAAAGAATCCATACCAATGACAGACGTTTCAAGTGTAAAGTTTGCACAAGAACCTTCATACAGAAAGGAGCTTGTGATGCTCATGAAAAGTTGCACTTCCGAGGAGGAACACAAGTGCTCTTAAATGTAAATGAAGGTTTGACAGCTCATAGATATGTAGATAATTTTGAAAACTCTCAAGACATTTCTGCTTCAACAAGCTCTAAAAATGATCTATTTGAAGATTTTGAAGAAGAAGAGTTTgaagaggatgatgatgatgaagatgaataCATTATCTATGAAGATGAAGATGGTGTTGATGAAGAGGAAAGGGAAGAGGAAGAAATGATCATTGATACAGATAACTCTCACAACTCTGTTAAAACAACTTTGATCAATGTACCATTTGATGAGACATCCAAATCGAGCAATGGGGTGGTGGGTTTACCATCAGCTAACATCACACCCATACCAGTTGCTGTGTCAAGTGATGCAATTCCAAGTATTGGTGACAGTTCTCTTCACATTACCCTTCTTTAA
Protein Sequence
MSGDKILITNEDMSAKEDHNVPEETLVYQDIPFSGSPSATGDKTVDDIEGDSVGTSKQVPIPDGSSSDVSRVGVSVIASTAEAEAYLYSETNQSGVLESVNELDNAQSSLAAEQVFDMTSEIKGELTSGLEIVESNEQESLHHIESLGQHTMEGIEDSGGSDSFGKSSEVVQSECHQEIEVNKTGNIDGEEFYEMQVAESHLVSDSLEINENHDSSEITESHSLDRSEETDKTHAVDDDQELYDRQVIYEIQEEDVSQEGDEIQEGEMSQEVYEIQEVDEVQEMGEVHEVNEVQDVDEALEVDEVQEVNEAHAVDEALAVDEAQGEVQEIDEIQDVDEAQDREEIQEEHEVQDGEEIQEGDEIQEGFEIYEAGDVYEGEEVHDDDESQEESEIPEDHMSEGASSQSASDSQDKHKNFEAQHCENETNENEEVKQVMEMSKTEVADLPMDVDESQDGDESQDAEESLKIDESQEVSENLEIDERHQDGSSQEVESEAPKQQTAVEDEMIDTSPSDPTTTDPQNSSVHTALEGREANSADGVSAIDEEAPSQCQSHTSSISDDKKSAETFKKNDVEGMKVENSKLSEIHPQNNVISNEILSEDGPENCSVGGLERGEEEDDITEDGEEDVGEGDIEDDGEGEDFVGDEEDFEDGDDMADEVEVEIEDCSDPEMESEGGVTYIISEGMIVVEENESSEAFATDQTVVSAEEENVHSDDQTGSPQKTTRIIIKMPPSKSNANEEEAEVRVSNQDVLEATKSARNSPASEQTSSSVLEEVSDTDRSCSKKAVIPSANENEAPVCAPEMPVKVDELEKPSNVCMTEIVETSTNKSITSSSIEKTVKREKSNRSVSSNVSQISGSDGNKTEESKNAVASEKTEASLLLAKETHTEPAKEQVESSTGQQKSDPGPQQRSLKNEKLSGIETTEQEKASKVAQQTSTSKSNKPVEKSSTRSVVSSKAQAKIPKVIDGNKSEKVQKEPSKEKHTLGAKDISKHSHSAQKQKSIRSSTEEKTQGPTRTSKQEMSSKDERSSKAENKKQSESKDVTRSAQSEVQHSSKALPKQPVVSSHRTRSNSTSTKDSSVKEKEKKVSRNDEVSEKKLATSDEPTPNKSNSEPKVALRSSRSRKSQTESTATSNSEEPVKKYRAKPITETLPRPRQSERVSKATEKAIASGLISRRSKPPAPDNSCSETHEKSSDLSSEDQSASQRRSKRKADLSPPASKEETPVSKRRTTRSGDAQPSEETTPSTPQAVRSARKSKNLKRKGSSPDVPPAKQPHTEETSPKDKDLEEFVANISKMCRICGSKNDNLLNVFGPEGLTMQLSEKIHNILPIKIRAEEPLPSGVCHPCVVTLMACEKLVEKCSSIDKRLRVHFKCPTEIVQKDKTTQLEAPSSQTPEKAVKGAATAMVNVDEKSKDTALKSSELPEKSKDLTSDPSDVTPSSVLAPDLEETSLKSTEGSVTPAEKSTPSQKHGQPTRSSSRVSAKDKQFKKGKKSSNEPSKPTTRSNKETGIAGKSNAARNTETEDSPPILEAEPPQSVEAANQEPLSQPPILIPQPAKPLPGLVPIPAEDPSAKRFGNTYRARMKPGQWEKIERGLEAIHGEAPEDEQEEGSCDVKPLTGAQAEEFHIVDLDMNMEEVQPGSAPGAGKSSVESIHVEIPPESAEEETAAQQASPKSVVDSILVDWSGDEEEVVAPAPKGTAVSQARRVNAAGSGKDNVNGRVQRIEALPAPCLFADDEGVENLPQVKSKPTTVTIKEESFWPEPAPGTSTSSTSEVPSSDVPWKCFVCGKRGKSLPKFLEHKKLHLNDRKLVSCPKCSESFSNAGLLKNHMKALHGDDDEDDVVEQQPRVSSRRRGKQQDTVVDADFSPASDGLYHCSLCQSAFTSIESLCQHKVTHQKTEIDVFKCNVCGKVFNRYNEYQHHLATHQTGAQNINMFQCGKCDMKMANQKEFIDHINSHSTEQTSFTCDQCEKIFDTKHKLRSHRSTAHKSTAYACHLCDKVCQKRITLIEHLRKHTGDNPFACPVCNKRFNRLANYKAHMTIHENARRYECPYCGKRFNRQSIQQRHIKTHTTEQSRKHRCRVCNLTFNLATEMFTHRRLHTRDEVERATWEDEKQRLALTSFPCKVCQIPFNTVEEVLTHMPSHTDEERDIAAKLINPKLECDICGKVLNSKRTFNAHRSSHIDGKPFVCKICSKGYATSTGLNYHMLSHTGERPYPCTFCHKGYKNSTDLKVHMRQHTGEFPYKCNKCNKAFRSASSLQKHGFVHSEVRPFKCRYCNMSFKRETTKHNHERIHTNDRRFKCKVCTRTFIQKGACDAHEKLHFRGGTQVLLNVNEGLTAHRYVDNFENSQDISASTSSKNDLFEDFEEEEFEEDDDDEDEYIIYEDEDGVDEEEREEEEMIIDTDNSHNSVKTTLINVPFDETSKSSNGVVGLPSANITPIPVAVSSDAIPSIGDSSLHITLL*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-