Ffus008757.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Frankliniella fusca
Gene Symbol
ZNF219
Assembly
GCA_029379305.1
Location
JAHWGI010000440.1:300466-308051[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 38 0.23 20 6.7 0.0 2 23 23 44 22 44 0.96
2 38 3.1e-05 0.0026 18.9 4.3 2 23 54 75 53 75 0.98
3 38 0.0046 0.4 12.0 4.7 1 23 81 103 81 103 0.95
4 38 0.0067 0.57 11.5 1.2 3 23 170 190 170 190 0.99
5 38 0.0012 0.1 13.8 4.5 1 23 196 218 196 218 0.95
6 38 0.13 11 7.4 1.0 3 23 328 348 327 348 0.97
7 38 1.6e-05 0.0014 19.8 1.0 3 23 356 376 354 376 0.98
8 38 4.6e-05 0.0039 18.3 1.1 1 23 382 404 382 404 0.99
9 38 0.00079 0.068 14.4 3.6 1 23 509 531 509 531 0.99
10 38 0.0059 0.5 11.7 1.5 1 23 537 559 537 559 0.98
11 38 2.2e-05 0.0019 19.3 0.6 1 23 567 590 567 590 0.96
12 38 0.00088 0.075 14.3 0.6 2 23 623 644 622 644 0.97
13 38 0.00087 0.075 14.3 1.4 1 23 650 672 650 672 0.98
14 38 0.0057 0.49 11.7 0.6 1 23 678 700 678 700 0.98
15 38 0.18 15 7.0 1.9 2 23 710 731 709 732 0.94
16 38 0.39 33 6.0 0.1 2 21 773 792 773 793 0.93
17 38 0.00083 0.071 14.4 3.0 1 23 812 834 812 834 0.98
18 38 0.0044 0.38 12.1 1.5 1 23 869 891 869 891 0.98
19 38 0.0015 0.13 13.5 0.6 1 21 940 960 940 961 0.95
20 38 0.055 4.7 8.6 0.9 1 23 992 1014 992 1014 0.96
21 38 0.08 6.9 8.1 0.4 1 23 1037 1059 1037 1059 0.99
22 38 0.039 3.3 9.1 0.7 1 23 1084 1106 1084 1106 0.97
23 38 0.65 56 5.2 4.4 1 23 1128 1150 1128 1150 0.95
24 38 0.0075 0.65 11.3 0.2 1 23 1230 1252 1230 1252 0.98
25 38 0.37 32 6.0 1.1 1 23 1269 1291 1269 1291 0.97
26 38 0.13 11 7.5 1.2 1 23 1318 1340 1318 1340 0.98
27 38 1.4 1.2e+02 4.2 1.2 1 23 1361 1383 1361 1383 0.95
28 38 0.29 25 6.4 0.5 1 23 1401 1423 1401 1423 0.97
29 38 0.48 41 5.7 1.2 1 19 1443 1461 1443 1465 0.86
30 38 2.5 2.1e+02 3.4 5.9 2 23 1542 1564 1541 1564 0.91
31 38 0.0054 0.46 11.8 1.5 1 23 1579 1601 1579 1601 0.98
32 38 0.026 2.2 9.7 0.4 1 23 1655 1677 1655 1677 0.98
33 38 0.018 1.5 10.2 1.9 1 23 1707 1729 1707 1729 0.98
34 38 0.0021 0.18 13.1 3.0 1 23 1766 1788 1766 1788 0.98
35 38 0.0031 0.27 12.5 2.1 1 23 1828 1850 1828 1850 0.99
36 38 0.00027 0.024 15.9 0.0 1 23 1857 1879 1857 1879 0.97
37 38 7.6e-05 0.0065 17.6 0.1 1 23 1907 1929 1907 1929 0.98
38 38 0.00027 0.023 15.9 3.9 1 23 1935 1958 1935 1958 0.98

Sequence Information

Coding Sequence
ATGATATTGATATTGCTCTGTGGTCCGAGTGCTGCAAAGGGTGCGAAGCCGTGGCGTGCGGTGGACGTGTGTCCGCTGTGTGGTGTGGAGGTGCGCGGTCCCGGGGGCCTGGCCTCGCACCGCTGTGTGCACCGGGCCCCCCCGAAACCGAAGTGCAAGACGTGCGATGTGTGCGGCAGGAAGTTTTCTCAGACGACGTGCCTGCAGCAGCACATGCGCACGCACACGGGCGAGAAGCCCTACAAGTGTCGGTTCTGCCCCAAGAGGTTCGCGCGCAAGACTACGCTGCGAGACCACTCTCACCTTCACACCGGCGAGAAGCCTTACCGTTGCGAAGTccgtggggcggggtcgggccagGGCGCCTCGCTGCCGTTCTTCTCCAAGGACCTGAGCGTCATGCTGCGGTCCGACCTCTTCCGGGCGCTCCCGGAGGCGGCCGCCGTCCTCGGCTCCAACAGCCGGagcgctccctcctcctctgaCGACCCGGAGCGGCGCTGGTGGTGCAACGTGTGTCCGGCCAAGTTTAAGATGAAGCAGCACCTGGCCGTGCATTACCGCCTGCACACGGGCGAGAAGCCTTACAAGTGCCCGCACTGCCCCAAGACGTTCCGGCACCGCAGTAGCCAGGACTACCACGCGCAAGTGCACCGTCGTGACCACGAGCTGCAAAAGTTTCTCCAGGAAAACTGTAACCAGCCGCCCCCCGGCCAGGGGCTGATGGGACCTGTCGGGCCGCTTGGGTCTACGGGGCACTCGGCGCCCTCGGGCCCGCCAGGAGGCTCCGTCCCCCTTGGAGCACAGGGGCATCCTGGAATACCAGGCCTTCCTGCAATTCCAGGGCTTCCAGCAGGTGGCTCTTCGGACGTGCACCCGCGCTTTGACGTTatccccggcgcggggccgagctcGGCGCAGCCGGTGCCAGTAGGCGGTGTAAACCCGGAGCTTGGGGACGACCCTGAGCGCAGGTTCTGGTGCACGGCGTGCCCCGCGCGCTTCAAGCTGAAGCAGCACCTGCTGGTACACTACCGCCTGCACACGGGCGAGAAGCCCTACGGCTGCCCGCACTGCCCTCGCCGCTTCACGCAGAAGAACGGACTGGTGATCCACCTGCGCACGCACACGGGCGAGAAGCCGTTCCAGTGCCCGCACTGCAGCCGCCAGTTCGCGCAGAAGACGGTGCTCGACGCGCACATGAGGATCCACACGGGCGAGCGGCCTTTTCCCTGCCCGTTCTGCGGTCTTTGCCGCATCAGCTCCGTCGTGTCCCTCTACCCGCCCGTCACGCAGCGGCACAAGAAGAACGTGGCCGACGACTTCGAGATCGAGTACGACAACGAGTGGGACGACGACTGGGCCGACCGGCACCCCGCCGACGACCCGGACGACCTGCAGCCCGTCGTGATGCTCGACAGGATCAGCCTGGACTCCGTGTCGTGCTCGGCCACGCCGGAGCCGGGACCGGAGCCTGGACCGGAGTCGGGACCGGAGTCGGGGCGCGGGCTGACCATACGCCCGTACCGCTGCCAGCACTGCCAGGCGCGCTTCTCGGCCAGGAAGTCTCTGCTGCTGCACATGCGGCGCCACGCGAGCTTGAAGCCCTTCGTGTGCGCGCACTGCCCGCGCCGCTTCAGCATGCGCAGCGCCCAGCTCATGCACGAGCGCACGCACCTGTCCGAGGCGCAGGCGCCCTTCAGCTGCGAGGAGTGCGGCCGCCGCTTCCGCTTCAGCAAGTCGTTGGCCTCGCACCTGCGCGAGGCTCACCTCGGCCGCCCGCTCAAGTGTGCCGCCTGCGACGCCCTCTTCCTGACGACGGGCGGCCTCAAGCAGCACGAGGAGCTGCGGCACGGCatcAACACTACCTGCtacgtgtgcgacaaggacttcCCGACGCACTCGGCCATGCTGGTGCACCTGCGCGTGCACGGCGCAGGCAGCCGCTTCCGCTGCCGCCAGTGCCCGGCGCACTTCTCGTCGTGGCTCAGCTTGCGCTCGCACTGGCGCATCCACTCTCGGGCCAACATCTTCAAGTGCAAGGTGTGCGCGATGCGCTTTGGCGCCCGCAGCTCCCTCATCAACCACCTCAAGCAGCACGACCGCGCCAAGGGCGGCAACATCGTGCGGTGTGTCAGGTGCTTGGAGGCCTTCGACAGCAGGAAGGCGCTGCACGCCCACGCCAAGACTCATCACGAGGAGAGGACGGAGGccgacccaccaccaccaccaccaccaccaccggccgcGCCACGGCAGAGCATGGGCGAGCCTGAGCTTGTGCTAGAGCGAATCAAAACTGACCCCAAACTGCGCTACTGCGAGACGTGCCCTGCTGTGTTCGATAAGTACTGGAACTATTGGAACCACCGCAAGAACCTGTGCCCCGGCGTCACTGGCAAGCCCGTTACTGTAAAGGTGACCGGGAAGAGCTTCCGCTGCAGCACCTGTGGCATGCGCTTCAAGACCAGGAAGCTGTTGTACTGGCACTCCCAGAGGCATCTCGTCAAGTCGGAGCCGATCGCGGAAAGTGAGCAGAGTCCTGCCGATGAAACGGCCGCTGTGGCGGAGGCGACCTCCACCTCCGCGAGTCCACAGAAGACTTTCCGCTGCGGCAAGTGCTCCCAGCCCTTCCCGGACAGGCGGGCCCTGCACATCCATTCCAAGACGCACTCCGGTGCCATGGTGGTGATAAGCGTCGAGGACGAGACCCTGATGCACCTGGACCCGTCGTTCCTGCCGGAGCCGGCCGCACCCGCCGAGGAGGACATCCCTGCGCCAGCCTCCGCCAAGAAGGGCAAGGGCTCGAAGAACGTGTTTCGCTGCGGGCAGTGTGGCCAATCGTACCGGGGCAGAAAGCTCCTGTGGCGCCACCGCAAGTCGTGTGGTGTCGAGACCAAGATGGCTGCTGATGAAGAGATGAGCGCCGGGACCAACGAGTCTGTGATAAAAAATGAAACTAAACCAAAGAAGTTCCGCTGTACCAAATGCTCCGAAGTCTTCCCCGACGCCGACAGTCACTGGTTGCACTACAAGGTGCACGTGACTGAAAGCATTCATGAGGTTGTCCACACAGAAGACGCTTCTGAACCCTTGACCTCTCCCAGCTACAAGTGCCGCACTTGCGCCCAGGAGTTCCCGCTCAGGATCAGCCTCTGGTGGCACTACAAGTCCCACCTGAGTGACGTTGAGGCCGAGGACACCTGCGTGGCCAGCACGACGGCTGTTGGCCTCCCCTTGCTTAACACCTTCCGCTGCCAGGAGTGCCCCGAGGAGTTCTCAGACGAGGACCTGCACTGGCAGCACTACAAGATTCACGTCAGCGACGCATGTGAGGAAGTTGGTCAGGAGGCGGCTCCGGAGATCCAGTCAGAGGCATCCTTCCAATGCAAGAAGTGCTTCAAGACTTTCATGGACGAGAGGAGCCACTGGGTTCACTACAAGGTTCACGCCGACTTGCCAGCCTTGGAAATGTACGAAATAGTGAAGCCTGCCAACGGTCAGCGAGAGGGAACGCCAGGTCAGTACCGCTGCAGCAGGTGCCTCGAGCTGTTCGCGGACCTGGAGGGCCACTGGTGGCACTTCCGGACCCACTACGATCCCGACGAGCTGGCTCGTCTCGAGGTCCCTGTAGAAGACGGCGTTGGAGAGGACGTGGGCGGGCTGACCGCTCCCAGTCGACCGATGTACAAGTGCTCCCAGTGCCCCGAGGTGTTTGACGACGACCGGAGTCGCTGGTGGCACTACAGGGTCCACGCCGCCGACTCGTCCACCTGCTTTGAGATGGTGCGCAGCCGGCCCGAGTATCGCTGCGTCAAGTGTTCTCAAGTTTTCCCCGACGTAGCAAACCACTGGCTGCACTTCCGCACCCACTACGAGGAGGAGCCGGAGGTGGTTGACCTGGATGCACCTGTTAACGGGAAGGCCACACCCTCCCCGGCTGGGAAGCAGTACCGCTGCTCCAAGTGCCCGGAGCTGTTCGAGAACCCGGAGGCTCACTGGAAACACTACCGCCAGCATTACGAGTCGGTGTGCCGGGAGGTGAGCGTCGACCAGGATGCCGGCGAGAAAATGACGGAGTACCGCTGCCGCAAATGCGACCAGGTGTCGGACAACCTGGAGGCGCACTGGTGGCACTACCGCTCGCACATGGACGTGGGCGAGGACGAGGAACTGGAGCAGGCCGCCGGCACCGTCGCCTTCCGCTGCGTGGAGTGCGCCGAGACGTTCCCGGACGCCGACAGCCACTGGTCCCACTACCGCCAGCACGTGGAGGAGGCCGAGGTGTGCGAGGAGGTAGCGCCGCCAGACGTCAAGCCCAAGGTGTACCCGTGCTCCAAGTGCCCCGAGGTGTTCCCTGATCGGCGCAGCCGCTTCCTGCACTGCGCCGTGCACGTGACGCCACGGGGTTCCaacgccgccggccccagcgCCCCCGTGCTCATCGACAAGGACAAGGGCCTCCAGTGCAACGCGTGCCGCGAGATCTTCCTCGACGCCGAGAGCCACTGGTGGCACTACAAGACCGTGCACAACGCGGACGCAGAGCAGGTCGGCCCGGAGACGTACCAGATCGTGGAGCTGACCAACGATCCCATGGAGGACCCCATGACGAAGCGCTGCCAGTGCAGTAAGTGCCCGGAGACGTTCCCCAACCGCAAGGCGCATCACCGCCACTACAAGGCCGTGCACGCCATGGAGGGCGTGGCGCGCTCGCCGCTCATGGTCGGCAGCTTCCCCTGCAGCCGATGCCCGAAGGTGTTCGCCGACCGCAAGAGTCACTGGTGGCACTACCGCACCCACACCGACGTGCCCAGCACTGCCGCCGTGGAGCTGGCGGTCGAGTCCAACAGGACTGACGAGCACGACAACCCTGCCAAAGAGGACGCCggtgacgctgctgctgctgccgaagAGGTCGCCAGCGCGCACACGGAgactgccgcgcccgcgcccaagGAGTACCGCTGCAGCAGGTGCCCCGAGGTGTTCCCCGACCTGGAGCAGCACTGGTGGCACTACCGCGTCCACTCGGACGAGGAGTTCGTGTCCTCCGTCAAGGGGCTGGAGGAGCAGATGCACCCCGCCGAGGCGACGACCGGCAGCGGAAGTGGGAGGTACCAGTGCAGCAAGTGCCAGGAGAGTTTCCCGGACCGCAAGGCCCACTGGGCGCACTACAAGATGCACAAACCGCGGTCGACCTCGACGGGCAGGTACGTCGCGACTCCCCCGCCAGGCAAGGTCAGCAGTGGCACCAAGACGGAGGGCGACCAGCATGTGAAATCCACCGAGAAGCACAAGTGTAACGTGTGCTCCAAGGTGTTCCAGCTGTGGATCAACCTGTTCAACCACAAGAAGTCACACGACCTCGTTCAGGGCGAGGCTgcggcagcccggccggcggccgaggAGTCCCCCGCTCAGTCTACCACGTCGGCCCGCAAGTTCCTCTGCTCCCCGTCGGTCGTCGTGGGCCGCTCCTTCAAGTGCAGCCATTGCCCGGCGCGCCTCAGCAACCGACGCCTGCTGTGGGCGCACTTTAAGACCCACAAGCAGGGCAACCGCTCGTACACCTGCGGCGAGTGCGACGCTAAGTTCAACtcgcgcggcgccctgcgcgcccacGTCGCGGTGCACGTCGCGCCCGCGGAGGCCGGCCTGGTTCCTCTGCTGGCCTCGATACCGGAGGAGCAGGGCGACACTGAATCCCGAGGCGGTTTCCCGTGTTCCAAGTGCGACGCCGTTTTCAAGAACAAAGTGGCCCTGGGGTCACACCAGCGCGTACACCCAGCACCGAAGCCCTTCAAGTGCAAGACATGCGGGGCGCGCTTCTCATATGAACACAACATGATGCGACACGTGAGGAGGACCCACCAGAAAAGCAAAAAGTAA
Protein Sequence
MILILLCGPSAAKGAKPWRAVDVCPLCGVEVRGPGGLASHRCVHRAPPKPKCKTCDVCGRKFSQTTCLQQHMRTHTGEKPYKCRFCPKRFARKTTLRDHSHLHTGEKPYRCEVRGAGSGQGASLPFFSKDLSVMLRSDLFRALPEAAAVLGSNSRSAPSSSDDPERRWWCNVCPAKFKMKQHLAVHYRLHTGEKPYKCPHCPKTFRHRSSQDYHAQVHRRDHELQKFLQENCNQPPPGQGLMGPVGPLGSTGHSAPSGPPGGSVPLGAQGHPGIPGLPAIPGLPAGGSSDVHPRFDVIPGAGPSSAQPVPVGGVNPELGDDPERRFWCTACPARFKLKQHLLVHYRLHTGEKPYGCPHCPRRFTQKNGLVIHLRTHTGEKPFQCPHCSRQFAQKTVLDAHMRIHTGERPFPCPFCGLCRISSVVSLYPPVTQRHKKNVADDFEIEYDNEWDDDWADRHPADDPDDLQPVVMLDRISLDSVSCSATPEPGPEPGPESGPESGRGLTIRPYRCQHCQARFSARKSLLLHMRRHASLKPFVCAHCPRRFSMRSAQLMHERTHLSEAQAPFSCEECGRRFRFSKSLASHLREAHLGRPLKCAACDALFLTTGGLKQHEELRHGINTTCYVCDKDFPTHSAMLVHLRVHGAGSRFRCRQCPAHFSSWLSLRSHWRIHSRANIFKCKVCAMRFGARSSLINHLKQHDRAKGGNIVRCVRCLEAFDSRKALHAHAKTHHEERTEADPPPPPPPPPAAPRQSMGEPELVLERIKTDPKLRYCETCPAVFDKYWNYWNHRKNLCPGVTGKPVTVKVTGKSFRCSTCGMRFKTRKLLYWHSQRHLVKSEPIAESEQSPADETAAVAEATSTSASPQKTFRCGKCSQPFPDRRALHIHSKTHSGAMVVISVEDETLMHLDPSFLPEPAAPAEEDIPAPASAKKGKGSKNVFRCGQCGQSYRGRKLLWRHRKSCGVETKMAADEEMSAGTNESVIKNETKPKKFRCTKCSEVFPDADSHWLHYKVHVTESIHEVVHTEDASEPLTSPSYKCRTCAQEFPLRISLWWHYKSHLSDVEAEDTCVASTTAVGLPLLNTFRCQECPEEFSDEDLHWQHYKIHVSDACEEVGQEAAPEIQSEASFQCKKCFKTFMDERSHWVHYKVHADLPALEMYEIVKPANGQREGTPGQYRCSRCLELFADLEGHWWHFRTHYDPDELARLEVPVEDGVGEDVGGLTAPSRPMYKCSQCPEVFDDDRSRWWHYRVHAADSSTCFEMVRSRPEYRCVKCSQVFPDVANHWLHFRTHYEEEPEVVDLDAPVNGKATPSPAGKQYRCSKCPELFENPEAHWKHYRQHYESVCREVSVDQDAGEKMTEYRCRKCDQVSDNLEAHWWHYRSHMDVGEDEELEQAAGTVAFRCVECAETFPDADSHWSHYRQHVEEAEVCEEVAPPDVKPKVYPCSKCPEVFPDRRSRFLHCAVHVTPRGSNAAGPSAPVLIDKDKGLQCNACREIFLDAESHWWHYKTVHNADAEQVGPETYQIVELTNDPMEDPMTKRCQCSKCPETFPNRKAHHRHYKAVHAMEGVARSPLMVGSFPCSRCPKVFADRKSHWWHYRTHTDVPSTAAVELAVESNRTDEHDNPAKEDAGDAAAAAEEVASAHTETAAPAPKEYRCSRCPEVFPDLEQHWWHYRVHSDEEFVSSVKGLEEQMHPAEATTGSGSGRYQCSKCQESFPDRKAHWAHYKMHKPRSTSTGRYVATPPPGKVSSGTKTEGDQHVKSTEKHKCNVCSKVFQLWINLFNHKKSHDLVQGEAAAARPAAEESPAQSTTSARKFLCSPSVVVGRSFKCSHCPARLSNRRLLWAHFKTHKQGNRSYTCGECDAKFNSRGALRAHVAVHVAPAEAGLVPLLASIPEEQGDTESRGGFPCSKCDAVFKNKVALGSHQRVHPAPKPFKCKTCGARFSYEHNMMRHVRRTHQKSKK*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-