Basic Information

Insect: Frankliniella fusca
Gene Symbol: ZNF236
Assembly: GCA_029379305.1
Location: JAHWGI010000970.1:2180558-2190541[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.12 9.9 7.6 0.2 1 23 289 311 289 311 0.97

2 28 0.00014 0.012 16.8 0.3 1 23 317 339 317 339 0.98

3 28 9.1e-05 0.0078 17.4 0.3 2 23 345 366 344 366 0.96

4 28 0.4 34 5.9 0.1 3 23 374 394 372 394 0.95

5 28 0.0002 0.017 16.3 2.6 1 23 407 429 407 429 0.97

6 28 4.9e-07 4.2e-05 24.5 2.0 1 23 452 474 452 474 0.98

7 28 4.2e-07 3.6e-05 24.7 0.3 1 23 480 502 480 502 0.98

8 28 8.8e-06 0.00076 20.6 0.6 1 23 508 531 508 531 0.98

9 28 0.0007 0.06 14.6 1.2 1 23 541 564 541 564 0.96

10 28 0.002 0.17 13.2 4.6 1 23 700 722 700 722 0.98

11 28 8.2e-07 7.1e-05 23.8 2.4 1 23 728 750 728 750 0.99

12 28 1.3e-06 0.00011 23.2 2.5 1 23 756 778 756 778 0.98

13 28 0.0012 0.11 13.8 2.4 1 23 784 806 784 806 0.96

14 28 0.0012 0.11 13.8 5.8 1 23 868 890 868 890 0.97

15 28 1.6e-05 0.0014 19.7 0.5 1 23 896 918 896 918 0.99

16 28 7.3e-07 6.3e-05 24.0 0.6 1 23 924 946 924 946 0.98

17 28 0.055 4.8 8.6 9.6 1 23 952 974 952 974 0.97

18 28 1.1e-05 0.00091 20.3 0.3 2 23 1263 1285 1262 1285 0.95

19 28 0.0002 0.017 16.3 3.3 1 23 1292 1314 1292 1314 0.98

20 28 0.00013 0.011 16.9 0.5 3 23 1324 1344 1322 1344 0.96

21 28 0.0028 0.24 12.7 1.8 1 23 1350 1372 1350 1372 0.98

22 28 2.6e-06 0.00023 22.2 1.0 2 23 1443 1464 1442 1464 0.98

23 28 0.00011 0.0091 17.2 5.9 1 23 1470 1492 1470 1492 0.99

24 28 4.6e-06 0.00039 21.5 2.0 1 23 1500 1522 1500 1522 0.97

25 28 0.0002 0.017 16.3 1.9 1 23 1528 1550 1528 1550 0.98

26 28 2.9e-06 0.00025 22.1 0.7 1 23 1807 1829 1807 1829 0.98

27 28 3.1e-06 0.00027 22.0 0.7 1 23 1835 1857 1835 1857 0.98

28 28 1.6e-05 0.0014 19.7 2.4 1 23 1863 1886 1863 1886 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.12	9.9	7.6	0.2	1	23	289	311	289	311	0.97
2	28	0.00014	0.012	16.8	0.3	1	23	317	339	317	339	0.98
3	28	9.1e-05	0.0078	17.4	0.3	2	23	345	366	344	366	0.96
4	28	0.4	34	5.9	0.1	3	23	374	394	372	394	0.95
5	28	0.0002	0.017	16.3	2.6	1	23	407	429	407	429	0.97
6	28	4.9e-07	4.2e-05	24.5	2.0	1	23	452	474	452	474	0.98
7	28	4.2e-07	3.6e-05	24.7	0.3	1	23	480	502	480	502	0.98
8	28	8.8e-06	0.00076	20.6	0.6	1	23	508	531	508	531	0.98
9	28	0.0007	0.06	14.6	1.2	1	23	541	564	541	564	0.96
10	28	0.002	0.17	13.2	4.6	1	23	700	722	700	722	0.98
11	28	8.2e-07	7.1e-05	23.8	2.4	1	23	728	750	728	750	0.99
12	28	1.3e-06	0.00011	23.2	2.5	1	23	756	778	756	778	0.98
13	28	0.0012	0.11	13.8	2.4	1	23	784	806	784	806	0.96
14	28	0.0012	0.11	13.8	5.8	1	23	868	890	868	890	0.97
15	28	1.6e-05	0.0014	19.7	0.5	1	23	896	918	896	918	0.99
16	28	7.3e-07	6.3e-05	24.0	0.6	1	23	924	946	924	946	0.98
17	28	0.055	4.8	8.6	9.6	1	23	952	974	952	974	0.97
18	28	1.1e-05	0.00091	20.3	0.3	2	23	1263	1285	1262	1285	0.95
19	28	0.0002	0.017	16.3	3.3	1	23	1292	1314	1292	1314	0.98
20	28	0.00013	0.011	16.9	0.5	3	23	1324	1344	1322	1344	0.96
21	28	0.0028	0.24	12.7	1.8	1	23	1350	1372	1350	1372	0.98
22	28	2.6e-06	0.00023	22.2	1.0	2	23	1443	1464	1442	1464	0.98
23	28	0.00011	0.0091	17.2	5.9	1	23	1470	1492	1470	1492	0.99
24	28	4.6e-06	0.00039	21.5	2.0	1	23	1500	1522	1500	1522	0.97
25	28	0.0002	0.017	16.3	1.9	1	23	1528	1550	1528	1550	0.98
26	28	2.9e-06	0.00025	22.1	0.7	1	23	1807	1829	1807	1829	0.98
27	28	3.1e-06	0.00027	22.0	0.7	1	23	1835	1857	1835	1857	0.98
28	28	1.6e-05	0.0014	19.7	2.4	1	23	1863	1886	1863	1886	0.95

Sequence Information

Coding Sequence: ATGGAATCTGTTCGACTTCTTGCCGAGCCCTCAGAGGTACTTGGAGGACATGTTCTTTCCCTCTCTGCTGGTGATGTTCTTCGGGATAATGGAATTATATTCACTCAAGATACTTTAACGTCCAGCATTATCACCACAGATtcaggaggagaggaggttCAAACATTCATGTCGTTACCAGTCCACTTGCTCCAGGATAATTCCTTCGTTGGTCCAGTTCTTGTAAAAAATGCTGCTGGAAATACCTTCTTGATAGATCCTAGACAGTGTAATGTTTTAGGAGATGGCAATGATGATGGTCAAGCCCACTTAATCATTGCGCCTAGCTCTGAATCCCTTTCTGCTGATCAGTCAACATCGAACATAATGGGCTTCGACATGGACTTCCCTTACATTACTAACGTTGGTAATGTGGTGCTCAGTGAGAGTGGAAGTGTAGCTGAGTGTAATATGGATGTGAACTCCTCAGCAATTCCACAACTAGAAAGTAGAATGATACAAGGAGCAAGTCAAATGCTGCAAGGAGCCAACAAATTGCTCCCTGAAGGAATGTGTATTGATATGTCCCAATTGAGTATTGTAACTTCAGATGGTGTAGTGTCCTATGTGACTGCTGTATCAGGTGACAATGCACTTCCAGAATCAAATGAAGTTGTATCAGCTCTTCCGCAACCTGATACAGTTTGTGAAGGTGTAGATTTCAAGGAGGGGGTTACTTTTGCATCTGAAGCTACAATACCTTCAGATGACCGTAGCAATATAGAAATCCTCCCTGCTAAACTTAAAAGAGGTCGAGGTAGACCCCGGAAAAATGACCCCAATCAAGAAGACGTAATGGATCCTCCAGTTGGGAAGGTTCCCCCATACAAATGTGATACATGTGACTATGAAGCTGCTTTGTGGGGAAGATTGAAAAGACACAAAGAAAGCCACAAAAATGAGAAACCTCACCGCTGCAAAGTTTGTGGGGCCTCATATAATGTTGAGGCAAATCTCACTCTGCATATGGCTACTCATAATCAAGAACAGCTCAAATGTCCGGAGTGTCAAAGAGAGTTTTCTCGTGTAGCCAGTTTGAGGTCTCATTTAATGCTTCATGAGAGAGAAGATAATCTTTTCTGCACAGAATGTGGGGATGAATTTGCTCTGCAGtATCAGTTAGACAGTCATGTAATGGAGCATCAAGATGAGTGGGtttcaaaaaacatcgaaaaaataCATGAATGTCAGAAGTGTTATCGTCAATTTTCCAAAGCATCTGCTCTCAAAGAACACATGCGAGATCATGTCAAGGTCAAGCATTCGCTAGTGCGCCGGAAACATGATCGTACTCAAGATAGGTCAGAGTTTTCTCACAAGTGTTCAACATGCGGGAAAGTTTTTCAGAAACCCAGTCAACTAGTTCGTCACATGCGTATTCACACTGGAGAAAGACCGTTTCCGTGTAGTGTTTGTGGTAAAGCCTTTAGCCAGAAAGGTTCTCTTCAAATTCACATGACTAAACACAATGGAGAGAAACCATACCAATGTGATTTTTGTAGTGCAAGATTTAGTCAGAAAGGTAATCTAAGAGCACACATTCAAAGAGTGCATTCAATTCCTCAGCAGGGCACTGTAACATTTAGGTGCACTGAATGTCCTTGTATCTTTAGAAAATTGGGTAGTCTTAATTCACATATGGGTCGTGCTCATAGTCAAGTAGACACTGGGAAGTCATTGAAAAAAGACAATGTCTGTCCCGAGCAAATGATGCAAGTAAATGTTAATCAAATTATGGCTCAAATTGCTGCTTTAAAAACGGTCAATAGTTGTGATGATAATCAAACTACATCTAATATACATATTGAAGAAAGAGAACACACTGGTTCTGTAAACTTACCATCAAATGAAGATTCCATGCCAACAAAAAAAACGGAATCCAGTGACATCCTTCAAGAGGCCATTAGTAAGAGTGGACTTGAGGGGAAACCTGACTCTGAAGTTTCAAGTAATAAGGCAACAGCTGTCATAGGATTCATCACATTAGCCGACAAGGCTCTAGATGGAACAGTTAGGCGCTACACTATTAGACAAAGGAAAGTTGGAGGTATTAGATGGCATCAATGTTCATTCTGTTGCAAGGAGTTCAAGAAACCATCAGATCTTGTCCGCCACATACGAATTCACACCCATGAAAAACCATTTAAATGCCCTCATTGTTTCCGAGCTTTTTCTGTTAAATCAACTTTAACAGCTCATATTCGTACTCATGGTGGTCTAAAACGTTACTCTTGTTCTGATTGTAATAAAAAGTTTTCAACAACAAGTAGTCTCAAAGTTCATCAAAGACTGCACAATGGAGAAAGACCATTCCCTTGTAGTGTATGCAATCGTACATTCCGGACATCAGGTCACAGACAAACTCATTGGCTACAGCACTGTGATCCCTTATCAACCCTATCAAGTGATGCCAAGAAAAGACgaagaaaatccaaaaaatcagaaatacaACCTGGAGAAAACCTTCCAGATGTTCTCCTTGGAGAACCAATTGTCATTACAGAATCAGGTTTGGTTCAAACAGATACTGTGAAACCTGAAAAAGAGTCTGGTCCAAGGCTCCATAATTGTGACCAGTGCACTGCCTCTTTCCGTAAAAAAAACCATTTGCGAAACCATTTAAGGATTCACAGTGGTGAACGTCCGTTTCAGTGTAACATCTGTAGTAGGAGCTTTGTATCTAATGGAGTATTGAAAACACATATTCTCACTCATGATTCGGTCAAAGCATTCAAGTGTGAAATTTGCCCGACTGCATTTTCAACTCAGGGTAGCTTAAAGAGACACCAGAGCATGCATAGTGACAGCAAACCGTTCATGTGTCCATACTGTCACAAGACATTTAAACATAAGTTGGCTTGTAAAAAACACATAAAGAATCATAAAGTTGAGGTAGCTCGAGCTGTTGCTAGGCAAGCCAATGAATTTCAAGAACCGCAGTTTGTTGTATCTGTTGTTGACGGTTTCAACGGGGGTGAAATAATTGTTCCCGACTTCCAGGCCTTCTCAAACAATGCTCCTGGTGGTGCAGACAACCTTGAAGAAACTGAAACTGACAAACTTGTTGACACAGGGGGTGTGATCACTCACACTCTACTTGCTGATGCATCTGGAACCATCACGCTTCCAGCCTCTCTAACTCAGGAAAGTATCCGTGAAATTGAAGATACACTAAATCAGCAACTTTCATGTGGAGGACCAAATGCAATTATAATGAGTAACTCTCATCAATCCAATCTTCATCTCAACACTTTAACTGTTAATACTACTGTGCAGCAAAACACAAGTGTGATTGATTTTGCTGCAGCCTCAGAAGCTGCTCATGCTGAAGATATTGCTGCAGCGGCAAACCTAGCTGCCAGTGAAGTACCAGCTGGCACGAATTTGAGTGATGAACACAAGGAATCTGCTCTAGTTTCTGAATCAAGTGATTTAAGCTCAGCAATATTTGGTCCAACATTTGACCAACAAACCTATGATGCTTGCACATTCCCTACAATAACTTTACAAGGCGATCACTTAAGTTTGGCTGGAATTGAACAAGGTGAAACCTTGTCAGCCAATATGGAGGCAATTTTGCCCCAGTCATGTGGTAATGAGCGTAGACGGGCAGATCAAAATGACGATGAAATTGATGCTCATGGTGGTGACATCCATGAGCTTTCCCTGCCTGATGCAGAAGTGCAGACTTTGACTGCTGAGGCTATAGAGGAGTCTTCTATATCCCGGCCGCGCTCCAGCTCTACTTCCTGTGAAACATGTGGACAAGCCTTTAAAAGAGTGTCTCAGCTCAAAGTGCACATGAGAGCTGTCCATTTAAGTTGTCCAAGACCCCATACATGTTCATATTGCACCCGGAGCTTCAGTTCTGCAAATGGTTTGAGGCTACACTCCCGTACTCATACACATGCTGTTGAGAAGAGTATTATTTGTGTACACTGTTCCTTGTCTTTTACAACAAATGCATCTCTAAGTAGACACATGGCTGTTCATACTGATAGAAGGCCATTCTCATGTGCAAAATGTTCTTCAGCGTTCCGCACTCAGTTGCAGCTCCGAAAgcacacaaaaattcatgaTCCCACTCTTGTAAAATCTCAAAGAATTAGCAAAAAAGTTCCTGCTATAATTTTCTCTGAGGAACAGACTTCAGCTTTAGCAAACCAAGATGTTGACATGGCTGGAAGTGTTTCTGAAAAAATGCTAATTGCCTCAGCCATTGAAGTAAATAGAGATGGGAGTGCAGAGGGTTGTAAAAAGTTTGACACGGAACCAGCATTTGCAAATAAGTGCAAGTTTTGCCCAAAAAGTTTTAGGAAGCCCTCTGACTTAGTACGACATGTCAGAATACACACTGGAGAGAGACCTTTCCGATGTGATCATTGTTATAGATCATTTACTGTTAAGTCTACTCTCAATTCACACCGAAAGACTCACATATCTGACTTACCCAAGATGTTTGCATGCCATGTTTGTAATTTAAGGTTTTCAACTAAAGGCAGTTTAAAAGTACATATGCGCTTACACACAGGTTCCAAACCATTTAAATGTCCCCTTTGCCCATTAAGATTCCGAACATCAGGTCACCGCAAAGCTCACCTTCAATCTCATGCACATAGTGGTAATGGTTCGCGTGCTCGCAAAACTCAGCAGGCTCTCTCAATTACTGAGGAGGAAACCAATCAGGAGATGCAAGAAATTCTAACTCATCAAATTATAACTGAGGATGGCTCAGTGGTGGAAGTTGACACCGCAGCTTTGCTAGCTGCTGGAGGTACCCTGGATGGAAGTCCTCTTCAATTACAAATAAATGATCAACTTCTTCAGCAATTGCAGTTCCAGAGTGGGGGCAATGTTGTCATCCAAGAAAATGGAACTGTTCACTTTGTGTCCAGTGGGGATGCAGACCATGGAACTGATtgtgaaaatattgaaaatccAGTAATGCCATTGGGTATTGATCAAGAGCAATCAGTGGCCTCAAACCAGGACTTACCTTCTCTTTTGCCAACGATTGAGGAAATCAGCGCAGCTCAGGAGCAAGTGGAGAGAGGAAAACAGCAAGAAACTGATGATATCAGTGGCATGCACTTTGAAATACATACCGATGAGCATGGACAAATTGTAAATATTCATCAAGCCCTTGATGGAAGTGGAGTCATTTTGGCAGATTTGAACATTGCTGATGTAACAAAAGTTAATATTGATGGATCAGAATTTCAAATTTTGGATGGTGTAACAGAAGTAAATCCAGAAAATGATCTTGATGCAAATGGTTTTGTAACACTTGATATAAGTGACATTATCATGGCGGCTCCAAActcgaaaagaaaagagaaaatttcAAAGAGCAAGAGTGATTCTTCTGGCCAAACAGCTCATACATGCTCAGTGTGCGGCAAAATTTTTGGGAAACCAAGCCAACTTCAACGCCATGCTAGAATCCACACAGGAGAGCGACCTTTCCCTTGCACTCAGTGCTGGAAAGCCTTCAATCAAAAAAATGCTCTGAAGGCTCACATGAAACGACACACAGGTGAACGACCTTTCAAATGCCCTCACTGTGAGCACGCTTTTACCCAAAGAGGCAATCTGAAGACACATATTGGAAGAGCTCATCCTCATTCTGCAGGAGTTGAAAactcaaagaaaagaaaaatgttatCCATCCCGAAGAATAATATACTAGATGATGTATCATTTAGACTTGACCTTGAAGGTGTTGTTGGGGATCTCTTTCCCCAAATGCAGGCTGCAACAGAAGCAGAGGCAGATTGA
Protein Sequence: MESVRLLAEPSEVLGGHVLSLSAGDVLRDNGIIFTQDTLTSSIITTDSGGEEVQTFMSLPVHLLQDNSFVGPVLVKNAAGNTFLIDPRQCNVLGDGNDDGQAHLIIAPSSESLSADQSTSNIMGFDMDFPYITNVGNVVLSESGSVAECNMDVNSSAIPQLESRMIQGASQMLQGANKLLPEGMCIDMSQLSIVTSDGVVSYVTAVSGDNALPESNEVVSALPQPDTVCEGVDFKEGVTFASEATIPSDDRSNIEILPAKLKRGRGRPRKNDPNQEDVMDPPVGKVPPYKCDTCDYEAALWGRLKRHKESHKNEKPHRCKVCGASYNVEANLTLHMATHNQEQLKCPECQREFSRVASLRSHLMLHEREDNLFCTECGDEFALQYQLDSHVMEHQDEWVSKNIEKIHECQKCYRQFSKASALKEHMRDHVKVKHSLVRRKHDRTQDRSEFSHKCSTCGKVFQKPSQLVRHMRIHTGERPFPCSVCGKAFSQKGSLQIHMTKHNGEKPYQCDFCSARFSQKGNLRAHIQRVHSIPQQGTVTFRCTECPCIFRKLGSLNSHMGRAHSQVDTGKSLKKDNVCPEQMMQVNVNQIMAQIAALKTVNSCDDNQTTSNIHIEEREHTGSVNLPSNEDSMPTKKTESSDILQEAISKSGLEGKPDSEVSSNKATAVIGFITLADKALDGTVRRYTIRQRKVGGIRWHQCSFCCKEFKKPSDLVRHIRIHTHEKPFKCPHCFRAFSVKSTLTAHIRTHGGLKRYSCSDCNKKFSTTSSLKVHQRLHNGERPFPCSVCNRTFRTSGHRQTHWLQHCDPLSTLSSDAKKRRRKSKKSEIQPGENLPDVLLGEPIVITESGLVQTDTVKPEKESGPRLHNCDQCTASFRKKNHLRNHLRIHSGERPFQCNICSRSFVSNGVLKTHILTHDSVKAFKCEICPTAFSTQGSLKRHQSMHSDSKPFMCPYCHKTFKHKLACKKHIKNHKVEVARAVARQANEFQEPQFVVSVVDGFNGGEIIVPDFQAFSNNAPGGADNLEETETDKLVDTGGVITHTLLADASGTITLPASLTQESIREIEDTLNQQLSCGGPNAIIMSNSHQSNLHLNTLTVNTTVQQNTSVIDFAAASEAAHAEDIAAAANLAASEVPAGTNLSDEHKESALVSESSDLSSAIFGPTFDQQTYDACTFPTITLQGDHLSLAGIEQGETLSANMEAILPQSCGNERRRADQNDDEIDAHGGDIHELSLPDAEVQTLTAEAIEESSISRPRSSSTSCETCGQAFKRVSQLKVHMRAVHLSCPRPHTCSYCTRSFSSANGLRLHSRTHTHAVEKSIICVHCSLSFTTNASLSRHMAVHTDRRPFSCAKCSSAFRTQLQLRKHTKIHDPTLVKSQRISKKVPAIIFSEEQTSALANQDVDMAGSVSEKMLIASAIEVNRDGSAEGCKKFDTEPAFANKCKFCPKSFRKPSDLVRHVRIHTGERPFRCDHCYRSFTVKSTLNSHRKTHISDLPKMFACHVCNLRFSTKGSLKVHMRLHTGSKPFKCPLCPLRFRTSGHRKAHLQSHAHSGNGSRARKTQQALSITEEETNQEMQEILTHQIITEDGSVVEVDTAALLAAGGTLDGSPLQLQINDQLLQQLQFQSGGNVVIQENGTVHFVSSGDADHGTDCENIENPVMPLGIDQEQSVASNQDLPSLLPTIEEISAAQEQVERGKQQETDDISGMHFEIHTDEHGQIVNIHQALDGSGVILADLNIADVTKVNIDGSEFQILDGVTEVNPENDLDANGFVTLDISDIIMAAPNSKRKEKISKSKSDSSGQTAHTCSVCGKIFGKPSQLQRHARIHTGERPFPCTQCWKAFNQKNALKAHMKRHTGERPFKCPHCEHAFTQRGNLKTHIGRAHPHSAGVENSKKRKMLSIPKNNILDDVSFRLDLEGVVGDLFPQMQAATEAEAD*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -