Ffus013020.1
Basic Information
- Insect
- Frankliniella fusca
- Gene Symbol
- pif1
- Assembly
- GCA_029379305.1
- Location
- JAHWGI010000970.1:1980698-1987540[+]
Transcription Factor Domain
- TF Family
- THAP
- Domain
- THAP domain
- PFAM
- PF05485
- TF Group
- Zinc-Coordinating Group
- Description
- The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion. It features the conserved C2CH architecture (consensus sequence: Cys - 2-4 residues - Cys - 35-50 residues - Cys - 2 residues - His). Other universal features include the location of the domain at the N-termini of proteins, its size of about 90 residues, a C-terminal AVPTIF box and several other conserved residues. Orthologues of the human THAP domain have been identified in other vertebrates and probably worms and flies, but not in other eukaryotes or any prokaryotes [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.0011 0.12 13.9 0.1 21 86 2 73 1 74 0.65 2 3 4.2e-11 4.5e-09 37.7 2.3 1 86 357 447 357 448 0.81 3 3 6.1 6.6e+02 1.9 0.5 49 62 1042 1060 1003 1079 0.61
Sequence Information
- Coding Sequence
- ATGCATACTTTTCCCAAACTTTGTattaaagataaaaaaaataatgacgtgTATGAGAGATATCTTGTTTGGATTAAGAATTCTTGTAATGGAAGGTTGTTGTTGGAATCTCCATTCACTCTCAACCGGCGTTTTTTTTATTGTGGTGACCATTTTGACCCGAATCAGTATGCAACTGATAAACGGGAAAGACTGAAACGTAATGGCATTCCTACTTTATTGTGCCCTGGACCACTTGCGCTAGTTGATGTTGAAAGTTATCTTCGTAAACATGGAGTCAAAGAAGAGAAACCTGAAAACATGGAAGTAGAGCAGGTTATTAATCAGGATGTAGGCAATGTCCATTACTTTTTAGAAGATGTAGTCGAAGTTGATGTCAATACATCAGGACCACATAGCTTGGACAATATGGAAATGGACTTGCAGTTCGATATTCCAGGTTTCTCTGGCTGTAGCAATGATCTGCACATGGGTGTTGAATCCAAATTTGACAATTGTGTTGTAACACGTGGTATTGGTGTTACGAATATGGACTCACAGTTTGATATTCCACATTCTTCTAGTAAAAGCAATGTCTTACAAAGTGATGTGGATTTTGTTGTGTCACACAGTTTGGATGAGGAAGGGGTCGAGGAAGAGAAACCTGAAAACATGGAAGTTGAGCAGGTTATTAATCAGCATGTAGGCAATGTCCATTACTTTTTTGAAGATGTAGTCGAAGTTGATGTCAATACATCAGGATTACATTGCGTCGACGATATGGAAATGGACCTGCAGTTTGATATTCCAGATTCCTCTGGTTGTAGCAATAATCTGCACATGGATGTTGAATGTAATTTTGACGATTGTGTTGTATCACATACTATTGGTGATTCAAATATGGACTCACAGTTTGTTATTCCACATTCTTCTAATGGAAGCAATGACTTACAAATTAATGTGGAATCTGGTTTGGTAGATTGTGTTGTGTCACATAGtttggaggaggaagagGTTCCTGTCATAAATGCCAGTTGTAGTAATGCTGAGCAGGAGCCCATCGTGCCATTAATAAGAATTCATTCAAGGTGTGCTGTAAGTGGctgcaaaaataataattcgacCAAATCTATGTTTGGTTTTCCTCGTGTTAACAAGATGGTTGATGGTCAACATGTTGCTGATGCAATGGAGTTCAAAAGGTGCAATGAATGGGTCCAGTTTtgtaaaaatccaaaaatattgACCAAAGATATTTCAAAATTGCATAAACTTTTCAAAGTTTGTGGTGGTCACttttctttaaatgattttacCTCTAAATTGAAAAAGAATCTGAAGAAAACAGCTGTGCCTCATATTGATGCACCTGATGATTCCTTTCcaaatgtttgtttgttttctgtaaGCGGTGAAAATTCAAATGAATGTGTGGAAAGTACTGATAATGTGCTTGTTGCTACCTCAGAAAGTTTTGAATCTTGTGATCGTCTGAAAGATTTAAAAGCTGTTCAAAGCAAAACCTTTGCCAGTAATTTTGAGGAAAAGATGAAATTGTTTACCCATCAAACATGTTCTGTTTGCAAAGAGACTTATTTGTACTACCCTGGCATGAAAAAAGCACACCGTAAAAAGAGTTCCTGTTGGAAATTTGCAGCCCAAAATCAAATGGACCCAGGAGTGGTGCCACCTGAACTTTCAGGGTTAACATTTGTTGAAGAGCAGTTAATTGCAAGAGTTCATCCTGTGCTAAGTGTATACAAACTGAAGGGATGTCAGTATGGGTACAAGGGAAATGTGATCAATTTTTATCAAGATGTTGAAGGGTTTGCAAGGCAATTGCCTCATCGAATATCTGATATTTCCTCAATTGTAACTGTTCGTTTTAATAATAGGATTGGGGAAAGTACTGATTTTCAAGTGAGAGTGAAAAAAGTTTATGATGCCCTGGTTTGGCTGAAAGCTAACAATGAGTTTTATTCCTGTATTGaaatttcaagtgaaaatttacaagagTTACCCGAAGATGGCAATGTTTATGACAAGATGTGTTCGTTTTCTCTTGGTGATTCTGATAATGACATTGATGAAATGAATGATGAAATGAATGATGAAAATGAAGATACTGGTACAGGAATGATTGAGTCATCTGGAGTTCCTTTTATTCCTGTTAGGAATCAGAATCAGCAAGTCAATGCTGCTTTAAATTGGCCTGAAATGAATGTTGAACCTGTGAATGAATTTATCCCGGGCTTTATTATGTGTGCTTTCCCATCCCTATTTCCGTATGGTACATGTGACTTCAATGAAGAAAGGAGAAGCAGAGTGAAAATGCATGAGTATTTTAAACATTTGTTATCGTATGAAGGTGGTAGATTTGCTAAACACCAGACCTTTCGTTTTTTTGCCTTTAACATGTGGATGAGGCATACTGCTTTAAGTGATGGCAATGTCTTTGTTGCAAGAGACTCAGTGTTAAGTACAATGAATGTTGAACAGCTGAAGGCACACTTAAATGATAATGCCAATGCAAGGAATAAACTTATGTTTATGGGTTCCAATCTACGGGGTTCAAAATCATACTGGAAAAGTCGATGTGGCGAACTGAAAGATATGGTTGAGCAGATTGGACTCCCAACTGTCTTTCTCACTATGAGTGCTGCTGACCTCTACTGGCCTGATTTATTTCGGATCCTTACTGGCAAGGATATTGATAATATACCTATGAGGGAGAGAAGGACATTGCTGCAAGAGAATCCTGTTGTGGTTGATCTATTTTTTGAGCACAGATTGCAATGCTATATTGACTGTgttttgaagccAAAATATGATGTAGTTGATTTTTGGTACCGCATTGAGTATCAACATAGAGGAAGTCCACACGTTCATGGGTTATTCTGGTTCAAGGATGCACCAAATGTTGAAAGTCTATTAAATGGGAccgaagaagaaaagaagaaagtaaCTAAATATTTTGATGAATTGGTGACTGCTGTGAATCCCAATAACTCTGTTGCAATGCCAGTGAAACATCCGTGTGAAGTTCTTTTTGGAACTGTAGATGATAATGAGACTGATCTAAGTCAATTATTGAAGAAAGTTCAAAGACATTCGAAATGCACACCTGGTTATTGTCTTCGTGCTGACAGAAAAACCAAAAAAACTGTATGTCGGTTTCATTTTCCTTTTCAGTTGTCTGAAGAAGCACAAACGAACTGTAAAGAAGATTCTTCTGAATTTGAATTTTTACCAGAAAGGAATGATCCATTAATTAATAAATTTAATCCATTTATTATAGCTACATGGAGAGCGAATATAGACATTTCTCCTGTATTGTCCAAAAGGGCAATCATTGAATACATATCAAAATATGTTTCTAAGTCTGAGGTGAGTTCAAAGAGCTTGCTTGAAATATGTGATAGTGTTTGTAATGGATTGAGTAGTGATGATAAAGCAAAGCGGGCTATTCAGAAGATCTTAATAAAAAATTGTGTGGAACGTGATATTAGTGCGCAAGAAGTTTGTCATATTATGATGGGCGCTAAACTGTTTAGTGCTGGTGGCAGACGTTTTGTTATTGTGTACACTGATTCATCTCAATGGCTTCCTGTAGCATCTGATTGTGATGAAACCAGTGAAATTTCAGCAAAGTCAAGCTCCTCTTTCATGGAAAAGTATGCCAAGAGGCCCAAACTTTTAGAAGAACTTTCAATGTGGGACTGTGCTAAATTTTATAATTCTAGCTCTTGGCGGAAAACTGTTAAACCAAATATTGTTCGAGTTTTTCCAAGACTGGTCCTAAATGATTCAGAAGATAATAGTGAAGCTTACTATCGGCAAAAAGTGCTTTTATTTTTGCCTTGGACTGTAGACAAGCCCATTGCAAAGCATGATGGTGAATCATGGAAGTCTTGCTTTGAAAGAAATAATGTTGAACTGCTTATGAGTGTAACTTTAGAGCTAAATGTTGTTTGTGAACAATCCTCTGATGTTGATGAAGAAATGGATGATGTGCCTGTGGAATCTAATGAGGATTGGATGATTGCTTCAAGAATTTGTGATAGTAGACCTGCAAATCCTGTTAGTATTGGGAGAAGAGAAGTTGATGTTCAAAATGATTGGAGTAGTTATTCTAAAAAATATGAATGTTATGGAGATATGCAGTACTTTGCAAATTTCattgaaaatcaaaaaaagaaTATTCAAGATACTGAAAATTTAACTGAATTCCCTgatattaatttttcttctgaACAATGCGCTGTGAAAGAATTAATGGAGGAGCAGATACAGTCATTGCTTCATGAATCATTGGGGGAAACTTTGCCAAAACGAGTTTTAGTTCAAGGAAAAGCTGGAACTGGGAAAAGTTTATTAATTCGTTATCTTGTTGACAAAGTGACCAGGCAGTTTGGTACTGGTTCTATTTTGTTACTTGGTCCAACTGGTGTAGCAGCTGTGAATGTAGGAGGATCAACAATCCATTCTACCTTGATGATTTCTGGGAAATGTCAAACTGTTCAGGATCTGAAGGGTGAAAGTGCTCGCAAATTCTGTGACTTTATTGAAAAGGTAAAATTCGTTATAATTGATGAGTATTCCTTCATTAGTTGCCCTTTATTGGGAATGATTGATAGAAGGTTGCGGCAAGGAACTGGAGTGAATGAGCCTTTTGGAAAtttgttcatttatttatttggcGATTATCGTCAACTTCCTCCAGTGAAATCACCACCCTTGTTTGGAGACAGTTCTGAATTAGAAATAAGCAAACATGGTAGTAACATGTTCAAATTGTTTGATCGTTATTATGTTTTGACTCAGTGCCATAGGCAGAAAGATAGTAAATTCCAAGAATTGTTAGATCGCCTTAGTGTTTGTCAGTCTACCAAAGAAGATTATGATATTTTAAGGAAAAGATTCACTAATATAGTTAAAGAAGAAGATTCTAGGAAGTTTGACAATGCTATTCGGTTGTTCTCAGAGAAGAAAGCTGTTGAACAGTATAAtgaaaaaaaactgagaaatcTGAAAGATGAACATGGTGGTATCTTACCAGTAGCGCTGATTCCAGCCAATCATCATGGCAAGGCAGCTAAAACTGCTTCAGATGAGAAAGCTGATGGTTTACCGAGTGAACTGCATTTGGCTCGTGGTGCTAATATCATGTTGAAAAGGAATTTATGGGTAAAGAAAGGACTAGTAAATGGCACCATGGGCAAAATTGTGGATATTTTGTATGAAGATGATAAAGAACCACCTCATCATGCACCTCGCATTCTCATGTGCAAATTTGACAATTATTCTGGACCTGGTATAACTACAGATAACTTGGTTCCTATTGGGAGAGTGACATCTTCATGGAGAAATGAAAGTGGTCAATGTAGTCGACAACAATTCCCTGTTGTTCTAAGCTATGCTTGTACCATTCACAAAAGTCAGGGCCTTACTTTAGATCAGGCTGTTATCCAAATTGGTAGAAGGGAATTTTCCCTTGGGTTATCTTATGTTGGTTTATCAAGAGTGAAGAGCCTTGACGGTATGTTACTGGAGCCTTTTCCATACACGAGGATAGCCAATTTGAAAAGTAGACCAGAACTAAAAATGAGAAAAGAATTTGAACGTCGACTGAATCTATAG
- Protein Sequence
- MHTFPKLCIKDKKNNDVYERYLVWIKNSCNGRLLLESPFTLNRRFFYCGDHFDPNQYATDKRERLKRNGIPTLLCPGPLALVDVESYLRKHGVKEEKPENMEVEQVINQDVGNVHYFLEDVVEVDVNTSGPHSLDNMEMDLQFDIPGFSGCSNDLHMGVESKFDNCVVTRGIGVTNMDSQFDIPHSSSKSNVLQSDVDFVVSHSLDEEGVEEEKPENMEVEQVINQHVGNVHYFFEDVVEVDVNTSGLHCVDDMEMDLQFDIPDSSGCSNNLHMDVECNFDDCVVSHTIGDSNMDSQFVIPHSSNGSNDLQINVESGLVDCVVSHSLEEEEVPVINASCSNAEQEPIVPLIRIHSRCAVSGCKNNNSTKSMFGFPRVNKMVDGQHVADAMEFKRCNEWVQFCKNPKILTKDISKLHKLFKVCGGHFSLNDFTSKLKKNLKKTAVPHIDAPDDSFPNVCLFSVSGENSNECVESTDNVLVATSESFESCDRLKDLKAVQSKTFASNFEEKMKLFTHQTCSVCKETYLYYPGMKKAHRKKSSCWKFAAQNQMDPGVVPPELSGLTFVEEQLIARVHPVLSVYKLKGCQYGYKGNVINFYQDVEGFARQLPHRISDISSIVTVRFNNRIGESTDFQVRVKKVYDALVWLKANNEFYSCIEISSENLQELPEDGNVYDKMCSFSLGDSDNDIDEMNDEMNDENEDTGTGMIESSGVPFIPVRNQNQQVNAALNWPEMNVEPVNEFIPGFIMCAFPSLFPYGTCDFNEERRSRVKMHEYFKHLLSYEGGRFAKHQTFRFFAFNMWMRHTALSDGNVFVARDSVLSTMNVEQLKAHLNDNANARNKLMFMGSNLRGSKSYWKSRCGELKDMVEQIGLPTVFLTMSAADLYWPDLFRILTGKDIDNIPMRERRTLLQENPVVVDLFFEHRLQCYIDCVLKPKYDVVDFWYRIEYQHRGSPHVHGLFWFKDAPNVESLLNGTEEEKKKVTKYFDELVTAVNPNNSVAMPVKHPCEVLFGTVDDNETDLSQLLKKVQRHSKCTPGYCLRADRKTKKTVCRFHFPFQLSEEAQTNCKEDSSEFEFLPERNDPLINKFNPFIIATWRANIDISPVLSKRAIIEYISKYVSKSEVSSKSLLEICDSVCNGLSSDDKAKRAIQKILIKNCVERDISAQEVCHIMMGAKLFSAGGRRFVIVYTDSSQWLPVASDCDETSEISAKSSSSFMEKYAKRPKLLEELSMWDCAKFYNSSSWRKTVKPNIVRVFPRLVLNDSEDNSEAYYRQKVLLFLPWTVDKPIAKHDGESWKSCFERNNVELLMSVTLELNVVCEQSSDVDEEMDDVPVESNEDWMIASRICDSRPANPVSIGRREVDVQNDWSSYSKKYECYGDMQYFANFIENQKKNIQDTENLTEFPDINFSSEQCAVKELMEEQIQSLLHESLGETLPKRVLVQGKAGTGKSLLIRYLVDKVTRQFGTGSILLLGPTGVAAVNVGGSTIHSTLMISGKCQTVQDLKGESARKFCDFIEKVKFVIIDEYSFISCPLLGMIDRRLRQGTGVNEPFGNLFIYLFGDYRQLPPVKSPPLFGDSSELEISKHGSNMFKLFDRYYVLTQCHRQKDSKFQELLDRLSVCQSTKEDYDILRKRFTNIVKEEDSRKFDNAIRLFSEKKAVEQYNEKKLRNLKDEHGGILPVALIPANHHGKAAKTASDEKADGLPSELHLARGANIMLKRNLWVKKGLVNGTMGKIVDILYEDDKEPPHHAPRILMCKFDNYSGPGITTDNLVPIGRVTSSWRNESGQCSRQQFPVVLSYACTIHKSQGLTLDQAVIQIGRREFSLGLSYVGLSRVKSLDGMLLEPFPYTRIANLKSRPELKMRKEFERRLNL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -