Ffus004842.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Frankliniella fusca
Gene Symbol
pif1
Assembly
GCA_029379305.1
Location
JAHWGI010000279.1:42133-50481[-]

Transcription Factor Domain

TF Family
THAP
Domain
THAP domain
PFAM
PF05485
TF Group
Zinc-Coordinating Group
Description
The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion. It features the conserved C2CH architecture (consensus sequence: Cys - 2-4 residues - Cys - 35-50 residues - Cys - 2 residues - His). Other universal features include the location of the domain at the N-termini of proteins, its size of about 90 residues, a C-terminal AVPTIF box and several other conserved residues. Orthologues of the human THAP domain have been identified in other vertebrates and probably worms and flies, but not in other eukaryotes or any prokaryotes [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 4.8e-12 5.1e-10 40.7 1.1 1 86 213 303 213 304 0.85
2 3 7.6e-12 8.1e-10 40.1 2.5 1 86 401 491 401 492 0.86
3 3 5.6e-12 6e-10 40.5 2.1 1 86 587 677 587 678 0.86

Sequence Information

Coding Sequence
ATGGGCAAGTTAATCACTTTTATGGGCTCATTTGGGCAATTACGAAATATTGATGAATTAATTGACACACCATCAGTCTCTAATGTGGTTGAGGCAGAGTATTGTCCGGTTTTGAATGAAGCAAATGGAAATGGTGTTGTGATTAATGTAGGTAGTGATGACATTTTCAGAGAAGGTTTTACTGAACTTTTTGTTTCATCCAATACTGGAGAGTGTTATGAAGTGAATAATGATCAGGTAATGGAATATGAGAGTGGAGGATGTAATGATTTGTTTGAAGTTGCTGCAACTGAACTTGTAGTTTCGCCCAAGAGTGGTCTGTGTTATACATTAACTAATGATAACTTGACAATGGAAATAGGGAGTGAATGTGGCAATGACTTGATGGAAGCTGCCAAGTTTGAGTTTGATACATGTTCAAGTAATGGAGAGAGTGTTGGAGTAAATTATGATGGAGTGGCAAGGGAAGTTACAGATGAAACGGTGGGTCATTTATCAGACTGTGATGTGATGGCTGTTGACAGTTGTTGTAATGAGACAAGTTTTAGTGACGTTTATAAAGAAGATAATAATGAATTAGTTGTTGGTCTGGCAAGTGCAAATCAACCGAAGACAAAGAAAAGAGTTGGACGACTGTGTTCTGTTGAAGGATGTGTTAGTAATAATCTCAGTCATAGTATGTTTCGATTTCCGCCTGTAATGAAACTTGTTAATGAGGAGTACATTGTGGATGATAATGAAATTAAAAGGTGTCGTAGTTGGATGTTGTTTTGCAATAACAGAAAATTGTTATCAAAAGACATTCGAAACTTACACCAAACGGATTTTGTGTGTTCTGAGCATTTTCCTGAAAATATGTTCTTGACCAGTGGAAGGAAGAGGTTAAAGAACACAGCTGTGCCCATTCTGAAGGGGCCTATTAATTTGTCGGAAAATGTTGGTTCATTTTGTTTACCTGGCCCGAGTAGTGATGGAAATTCTTGTAATGCTGAAGGTGGTAGTAGTAATTATGATGTGGTCAGTGAGAATCCAGAAATACAAGACACATCACATCATACATCAGATTCTGATTTGATGGTTGTTGCCAGTAGTTGTGAGGAGACAAGTTTTAGTGATGTTTATGTAGAAGAGAATAATGAATTTGCTACTGTTTCGGCAAGTGCAAATCAAACCAAGGCAAAGAAAAGAGTTCGACGGTTATGTTCTGTTGAAGGATGTGTTAGTAATAATGTCAGTCATAGTATGTTTCGTTTCCCTCCTGTAATGAAACTTGTTAATGAGGAGTACATTGTGGATAATAATGAAATTAAAAGGTGTCGTAGTTGGATGGTGTTTTGTGATAACAGAGAATTGTTATCAAAAGACATTCGAAAGTTACACCAAACGGATTTTGTGTGTTCTGAccattttcctgacaatatgTTTGCTACTTGTGAAAGGAAGAGGTTAAAGAACACAGCTGTGCCTATTCTGAAAGGGCCTATTAATTTGTTGGAAAATGTTGGTTCATCTTGTTTACCTGGCCTGAGTAGTGATGGAAATTCTTGTAATGCTGAAGGTGGTAGTAGTAATTATGATTTGGTTGCTGAGAATCCAAAAATACAAGACACATCACATCATATATCAGACTGTGCTACGATGGTTGTTGGCAGTAGTTGTAAGGAGACAAGACTCAGTGATGTTGATGTAGAAGAGAATAATGAATTTGTTGCTGTTTCGGCAAGTCAAACCAAGGCAAAGAAAAGAGTTCGACGGTTATGTTCTGTTGAAGGATGTGTTAGTAACAATGTCAGTCATAGTATGTTTCGTTTCCCTCCTGTAATGAAACTTGTTAATGAGGAGTATATTGTGGATGATAATGAAATTAAAAGGTGTCGTAGTTGGATGATGTTTTGTGATAACAGAGAATTGTTATCAAAAGACATCCGAAACTTACACCAAACGGATTTTGTGTGTTCTGAgcattttcctgacaatatgTTTGCTACTTGTGAAAGGAAGAGGTTAAAGAACACAGCTGTGCCCATTCTGAAAGGGCCTATTAATTTGTTGGAAAATGTTGGTTCATTTTGTCGACCTGGCCTGAGTAGTGATGGAAATTCTGCTAATGCTGAAGGTGGTAGTAGTAATTGTGTTTTGATTGCTGAGAATCCAGAGTTAGAAATCAGAAGACATGATATTAATTGTGAATATAGAAATTTGTGTGCTAAGTTTGAGGATAAGttgaaaagtatgaaggaagAGTTCTGTGATATATGTAAAGAGAAGTATTTGTGTTATTCAAACATGAAAAAAGCACATAGGAAGAAAGCTGTTTGTTGGAAATATTCTGATCAAAACAATATGGATCCAGGCATAGTTCCGGAAGAGCTGTTGGGTCTAACATTTGTAGAGCAGTTATTAATTGCATTAATACACCCTGTGCTGAGTGTTTTCAAATTGAAGGGATGTCAATATGGATACAAAGGgaatgttattaattttttgcaAGATGTGAAAGGTTTTGCAACAATGTTACCGTATCGAATTGAAGAGCTTAATTCTGTATTAACTGTTACCTACAGAAATGGTACTGAGAAGAGCTGTGATTTTCAAGTAAGAGCTGGGAAAGTTCGTGATGCTCTGGTATGGTTGAAAGTGAACAATGATTATTATAAATATATTGAGATTTCAGAAGAAAATATTGCAGATTTGCCTATAGATGGGAATGTGTATGATAGAGTAAACTCAATGGTTATTGATGGCGTTGAAAGTGAGGAAAATATTGATGCTGAATTAGATGATGAATTAGTTGGAAGTGAAACAGAATCCATTGAAAATATTGCGTCTTCTGGTGTACCTTTCGTACCTGTATATAATCAGGATCAATTAATCAACAGTTCATTACAGTGGCCTAATTTGGGTACTGATCCTGTCAATGAATTTGACGCTGGTTTTATAGTTAAAGCTTTTCCATGTTTGTTTCCTTATGGAAAATGTGACTTACATGATGTTAGAGAAAAGAAAGTTCATATGCATGAATATTTTAAACATTTACTTTCCTATGAAGATGGAAGATTTGCAAAACATGCAACATTTAGATTTTTTGCTTTCAATATGTGGTTGAGGCATACTGCTATAAAGGCTGGCAAAGTTTTTGTTGACAAAGATTCAGTTTTAAAAGAAATGAATGTTGAAGAATTAAAGGCTCACTTGGCTTCTAATGTGAGTGCTCGCAATAAACTCATGTTTATGGGTTCTAATCTGAAAGGTTCTAAGGCATATTGGAAGAGTAGGTGTGGTGAATTAAGAGATATGGTGGAGCAAATAGGACTTCCTACTATATTTCTAACTCTAAGTGCAGCTGATTTTTATTGGCCTGATCTATATAGAATTTTGAGTGGAAAAAATATAAGTGAAGTATCAATGAAGGAGAGAAGATCATTAATTCAAGAGAATCCTCTTATTGttgatttgttttttgattATAGGTTGCAAATATATATTGAGGAGGTTTTGGAACCGAAGTATAAAGTGAGTGATTATTGGTATCGTATTGAATATCAACACAGGGGTAGTCCTCATGTGCATGGCTTGTTTTGGTTGGAAGGTGCTCCAAAGAATGTTGAAAGATTATTGAATGGTAGTGAAGAAGAGAAGTTGTTTGTGAAGACGTATTTTCAAGGATTAATTTCTGCCATTAATCCTAATTCTAATGTTGACATGCCTGAGAAACATCCTTGTGAAGTTAGGTATGGAGAAGTGCAAGATTTTGAAACAGATATTAGTCAGTTATTGAAAAAAGTGCAGAGACACACGAGATGCAGTCCTGGATACTGTTTGCGTTTGAACAAGCAGAAGGAGACTGTGTGTCGTTTCCGTTTTCCATTTGATATAACTGAAGCAGcagaattaattttgaatgagaAGTCGGGTAATTATGATTTTGTTCCTGAAAGGAATGATCCTTTGTTGAATAAGTATAACCCATTCATTATTGCTACGTGGAGAGCTAATATGGACATTTGTCCCATTCTTCATAAATCTGCTGTTATTGATTACATTACGAAGTATGTGTCCAAATCGGAAGTCAGTTCTAAATCATTATTGGATATTTGTGAACTAGTGTGTAATTCTATTAGTGGTGGTGATCATGCAAGACGAGCCATTCAGaaaatattaattaagaacTGTGTTGAAAGAGATATAAGTGCTCAAGAAGTTTGTCACATAATGATGGGTGCTAAATTATTTAATTGTGCTGGACGTAATTTTGTTGTGGTTCAAACTAATGAAGCAAGGTGGACTTTACTGAACATTAATTCTGAAGATGGTGAACTGAACAATTTGTCTCAGAAGAGTAGTTCATCatttatggaaaaatatggtaATAGGCCAAATGTATTGAGTGATGTGTCAATGTGGAATGCTGCCAAATTTTATAATTGTAAAACGTGGAACAGAAGTAAAAAGAAGCCCAATATTGTTAGAGTGTTCCCACGGTTGAAAATTATTGGTGATGATAATGAAAAGTATTATAGGCAACAAGTTTTGTTACATGTTCCTTGGTCAAATGAGAAACCTCTAGATAAGGGAGATGATGAAAGTTGGGAGtcatattttaaaagaaattatgTTGCAAATTCTGAAGAAACTGTTGATTTAACTGATAATGTGGTTAGAGAACCTGAAGAAACTGAAGAATGTGAAAATGATGTGAATGAAAATCTTGATGTTGTTGCAAATGAAGATTGGATGATTGCTCAGAGGCTTATAGCAAATATTGCTCCTGATGATGTCAACCCTGGAATGCGTGAAGTTGATATAAAGTATGATTGGCATGCCAATTCACATTTGTATGATTGCTTTGGTGATTTTAAGTATTTAGAGAAGTTtattgaaaatgaaaagaagaactATGAATATACTGAAAACATTGTGGTAGACTTGCCAGACATTAACTTTTCAAGTGAGCAAACTTTAGTTAAAAATGTAATGGAAAGGCAAATTGAGGCCTTAAAGAATGGTATTAATGATAATAGTATACCTAAAAAGGTTTTGGTGCAAGGAAAAGCTGgAACTGGTAAGAGTTTGTTGATAAGGTATCTTGTCAATAAAGTGACTAGAGAATTTGGTCAAGGTTCTGTTATGCTTTTGGGGCCTACTGGAGTAGCTGCTGTTAATGTCGGTGGAGCAACTATTCATTCATCATTAAGTATACCAGCAAAAGGTGGCAGTATTTCAGAGTTGACTGGTGAAAGTGCTCGAAAATTTTGTGATACCATTTCAAAAGTTAAATTTGTGATTATTGATGAATATTCGTTCATTTGTTGTTCATTATTGGGAGATATTGATTTTCGATTAAGGCAAGGAACTGGGATTCAAGAACCTTTTGGTGgactgaatttttatttatttggtgACTATCGTCAGCTTCCTCCTGTCATGAATCAACCATTGTATGCAAGGAGTGAACTAAGACCTGAATCATTACATGGCAAAAACCTCTTTAATTCATttgattgtttgtttgttttaacTCAATGTCACAGACAAAAAGACAGAGCATTTCAAGGTCTTTTAGATCGTATTAGCATGGGTTTAGCCAATATTGAAGATTATAGTGTTTTGCAGCAACGATTTGAAAGTAATGTTACTGTGGATGAAGTGAAGAAGTTTGATAAAGCCATTAGATTGTTTTCCACTAAAGAAGACGTTGCAAAGCACAATAAGAAAACTTTGAAAGAATTAACAGATGATGCAGGAAATCTTGTACCTGTAGCAATTATTCCGGCAAAACACAATGGCAATGGTGCAAAATATGGTTCTGAAGACAAAGCTAATGGTTTGCCAAGTGAATTAATCATGGGCCGGGGTGCTCGAATCATGTTGAAACGAAATTTATGGACCAAGAAAGGATTAGTGAATGGTACTATGGGCACTTTAGTGGATATTCTATATGATGAAGACAATGAACCTCCTTTTGGTACTCCCCGAATATTAATGTGTCAATTTGATAATTACAAAGGACCTGGTATTGGCCCTAATAATTTAGTTCCCATAGGGCCAGTTGTTAGTTCTTGGAAATCCAGTCATGGTTCTTGTAGTAGACAACAATTTCCTGTTGTATTGAGTTATGCTTGCACAATTCATAAAAGCCAAGGTTTAAGTCTTGATCAAGCTGTCATCAGTATCGGGAAACGTGAATTCTCTCTTGGATTAACCTATGTTGCTCTTTCAAGAGTGCGGAGTTTTGAAGGACTTTTATTAAAAGATTTTGGATTTGATCGTTTGGATTCTTTGCGAAAGAGGTCCGAGTTGACTGATAGAAGAGCTTTTGAGGAGGAACTTCAGAATCATTATTAA
Protein Sequence
MGKLITFMGSFGQLRNIDELIDTPSVSNVVEAEYCPVLNEANGNGVVINVGSDDIFREGFTELFVSSNTGECYEVNNDQVMEYESGGCNDLFEVAATELVVSPKSGLCYTLTNDNLTMEIGSECGNDLMEAAKFEFDTCSSNGESVGVNYDGVAREVTDETVGHLSDCDVMAVDSCCNETSFSDVYKEDNNELVVGLASANQPKTKKRVGRLCSVEGCVSNNLSHSMFRFPPVMKLVNEEYIVDDNEIKRCRSWMLFCNNRKLLSKDIRNLHQTDFVCSEHFPENMFLTSGRKRLKNTAVPILKGPINLSENVGSFCLPGPSSDGNSCNAEGGSSNYDVVSENPEIQDTSHHTSDSDLMVVASSCEETSFSDVYVEENNEFATVSASANQTKAKKRVRRLCSVEGCVSNNVSHSMFRFPPVMKLVNEEYIVDNNEIKRCRSWMVFCDNRELLSKDIRKLHQTDFVCSDHFPDNMFATCERKRLKNTAVPILKGPINLLENVGSSCLPGLSSDGNSCNAEGGSSNYDLVAENPKIQDTSHHISDCATMVVGSSCKETRLSDVDVEENNEFVAVSASQTKAKKRVRRLCSVEGCVSNNVSHSMFRFPPVMKLVNEEYIVDDNEIKRCRSWMMFCDNRELLSKDIRNLHQTDFVCSEHFPDNMFATCERKRLKNTAVPILKGPINLLENVGSFCRPGLSSDGNSANAEGGSSNCVLIAENPELEIRRHDINCEYRNLCAKFEDKLKSMKEEFCDICKEKYLCYSNMKKAHRKKAVCWKYSDQNNMDPGIVPEELLGLTFVEQLLIALIHPVLSVFKLKGCQYGYKGNVINFLQDVKGFATMLPYRIEELNSVLTVTYRNGTEKSCDFQVRAGKVRDALVWLKVNNDYYKYIEISEENIADLPIDGNVYDRVNSMVIDGVESEENIDAELDDELVGSETESIENIASSGVPFVPVYNQDQLINSSLQWPNLGTDPVNEFDAGFIVKAFPCLFPYGKCDLHDVREKKVHMHEYFKHLLSYEDGRFAKHATFRFFAFNMWLRHTAIKAGKVFVDKDSVLKEMNVEELKAHLASNVSARNKLMFMGSNLKGSKAYWKSRCGELRDMVEQIGLPTIFLTLSAADFYWPDLYRILSGKNISEVSMKERRSLIQENPLIVDLFFDYRLQIYIEEVLEPKYKVSDYWYRIEYQHRGSPHVHGLFWLEGAPKNVERLLNGSEEEKLFVKTYFQGLISAINPNSNVDMPEKHPCEVRYGEVQDFETDISQLLKKVQRHTRCSPGYCLRLNKQKETVCRFRFPFDITEAAELILNEKSGNYDFVPERNDPLLNKYNPFIIATWRANMDICPILHKSAVIDYITKYVSKSEVSSKSLLDICELVCNSISGGDHARRAIQKILIKNCVERDISAQEVCHIMMGAKLFNCAGRNFVVVQTNEARWTLLNINSEDGELNNLSQKSSSSFMEKYGNRPNVLSDVSMWNAAKFYNCKTWNRSKKKPNIVRVFPRLKIIGDDNEKYYRQQVLLHVPWSNEKPLDKGDDESWESYFKRNYVANSEETVDLTDNVVREPEETEECENDVNENLDVVANEDWMIAQRLIANIAPDDVNPGMREVDIKYDWHANSHLYDCFGDFKYLEKFIENEKKNYEYTENIVVDLPDINFSSEQTLVKNVMERQIEALKNGINDNSIPKKVLVQGKAGTGKSLLIRYLVNKVTREFGQGSVMLLGPTGVAAVNVGGATIHSSLSIPAKGGSISELTGESARKFCDTISKVKFVIIDEYSFICCSLLGDIDFRLRQGTGIQEPFGGLNFYLFGDYRQLPPVMNQPLYARSELRPESLHGKNLFNSFDCLFVLTQCHRQKDRAFQGLLDRISMGLANIEDYSVLQQRFESNVTVDEVKKFDKAIRLFSTKEDVAKHNKKTLKELTDDAGNLVPVAIIPAKHNGNGAKYGSEDKANGLPSELIMGRGARIMLKRNLWTKKGLVNGTMGTLVDILYDEDNEPPFGTPRILMCQFDNYKGPGIGPNNLVPIGPVVSSWKSSHGSCSRQQFPVVLSYACTIHKSQGLSLDQAVISIGKREFSLGLTYVALSRVRSFEGLLLKDFGFDRLDSLRKRSELTDRRAFEEELQNHY*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00731548;
90% Identity
iTF_00731547; iTF_00731548;
80% Identity
-