Ffus001097.1
Basic Information
- Insect
- Frankliniella fusca
- Gene Symbol
- CSRNP3
- Assembly
- GCA_029379305.1
- Location
- JAHWGI010000028.1:129625-133647[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.83 2.6e+04 -4.4 0.7 68 89 114 135 104 167 0.40 2 3 1.3e-102 3.9e-98 328.5 10.2 1 218 709 930 709 930 0.87 3 3 0.021 6.7e+02 0.8 0.6 52 115 934 997 929 1016 0.55
Sequence Information
- Coding Sequence
- ATGGATGCAACAGCAGGGGACCGTGTAGAGGAAAATACTCCTCCTGAGATTTCCTCAACGGTTACACCACCTGTGTCTGCAAATGAGCCTGTTCTGCAAGGGCTAGCGACCCTGCTGGTTACCCCGCCAGCCAGCTCATCTTCCAGTCTCCCTCACACAGCAGCGCCCAAGGGTGGCGGAGAAGTTGATATGACGATCAAATGTTCAAATATGCTGGATACTATTGTTTCAGAGACAAATGGAGGAGAAAATGTCATAGGTCCCAGCAGTGAGTCAAGTAGAAGGGACAGTGCCACAAATGACTGGCCAGGAACAGATTTGGTAAggcaagaagaaaagaagaactGTGATAGTACAACAGAACAAGAATTAACCCTTGAGGGCAGTCAAACTAGGACGGATCTCAACACTGCTGATGAATTATCAACAACAAAATGCTCCTCTGGTGAAGTGAGAGGTGCCAGTGACAACCACAGCCAGCTTAGTTTGGAGCAATCCAACCAAGTTTTAGATGCAGTGTGTGCAGGGAATGTATCTGGTGTTGTGTCAAGTGATAAAATTGTGAATGGTGAATTATGCAAAGTAACAGATCTATCAGCCACAACACTTGAAGATGTAGTTCAAACCAAAAGTGCTTGCGAAGAATCTAAAACAAATGCTTCAACAGTGGACAAAACTTTAGTCTCCACAAACCTGTTAGGACCACTACAAGACAGTTCTCAAAATATAGAAGAACAAGAAGCACTTATTGAATCTCAGGATCGGTCAGATGGCAGTGATTCTGGCCTTGGTTCAGAATCTGCTGAAGCTCTGTCATCAAACTCTGCAGATGAACTATGTATTGGGAACACTTGTGATACTGAAAATTTCTGTGTAGTAAATAATTTTAAAGATTCTGATATTTCTACTGATGCGGCTGAAATACAGATAGGAAATTCTTTTGCTGTCTCTGACAACAAATTTGTATCAAATTCTTCCTCTGCAGATGTGCAAAATCTGTTTATTAAAAGCAAACCTCTTTCTGATTGTGAAAGTAGGTCAATTGTTTCTGAGTTTGCAAATGGAGATGATGTATTGTCCATCTGCAAAAGTAGTGTAAACCCTCATTCTGAAAATGAGAATGTGCATGTAGCTATTACTGAAAAACAGTCCTGTGGCAGTGGTTCTATGAGTGAATGTAATCAATCATTATTACTAGACGGTAAAGATCATCAGCTACTAGTGAAAAATTATGGTGCCGCTCCaagtacaagtgtaaaattagtcAACAAAAGTGATATTTTTGAACCTTCTCAAAGTCTTTATCCAATTCTCAGAGACTGTGTTGCAAATCTGGGTCAAACAGAATATCCTAGTGTTAACAGTAACTGTCATATGTTGCAATGTGAGACATCATTTCAAAGTGATGATAGTGTGGTCCCAACCTCGGCAAACAGCTGTCAGAATTCTGTTACACCCCAAGATTGTATATCTAACAGTGAGATCAGTAGAGAAAATTTGAAATTATCTTCCCCAAGTAAAAACTTGTCTGTTTTAACTGAGGATGTGGAGGCAGACTTTTCACAGAGGCACAGTGCATTTATTTCTGATAAGCTTGAATCAGAATCAAGTTACAAGAATGTTAATGGAGAAGTAGCGGGAAATATGAATTGTATGTCAACATCCATCAATGACACATTGACTAATGATTGCCTTGGTGGAACAGGAACATTAAGTGAAGACAATATCCCTACATTTGATGATTTAAGGACTCCGCCAGGAGAAACAGATTTTAAAGCGTCTTCAGTTGAAGAGATAGATGATGATGTTCCTCTGCAAACGCCTACTGTGACATTGGCTCCTATTCTCTCTGATTTCTCTCTAAAGGCAGATATTCTGGGGCAAGTCACAATGCCTACCATGGTTTGTGAGGGAGGTGATGGAGTGGATGAGCTAGACTTTCCTCATGCACAAGACAAGACGGAGTCTGTTTCTGTGCCTTCATCTGAAAGCACAGCCAGTGAATCACTGGCAGGCCCTAGTCGGAGTTTGTCAGTGTCAGACGAGAATACCAACACcaatagaagaagaagaagtacaTTGAAAAGGCCAGCCACATCCTCATGTGAGGATGAAAGCAAGCCAAAGAGAAAAAGGTCAATTGTCTTTGACTCAGTCTCTGTGTACTACTTTCCTAGAACTCAAGGCTTCACATGTGTTCCTTCCCAGgGTGGATCAACTCTTGGAATGGCCCAAGAGCATTCTCACATGCACCGTTTTACTATGGTAGAACATGCAATAGAACAAAGACGTGCTCACCGCAATATGCTGATGCAACTGCGTAGAAGCACTGAGCTAGGTGATGGATCAAATTGCGCGGCACCAACTAGTAGTAGTGGAGGTGGTGCTGACGAATCCAGTGATGACTCAGATTCTGATGAGGAGCAAAGTGAAATGTCAGAAGAAGAGATGGATATGGATGGATACTATTTCCTTCAACCTGTGCCTACAAGACAACGGCGAGCATTGTTACGAGCTGCTGGAGTTCGGAAAATTGACTCTGTTGAAAAAGATGAGTGCCGTGATATAAGATCATCAAGAGAATTTTGTGGATGTGGTTGTAAAAACTTCTGTGACCCAGAGACCTGCTCATGTTCTCAGGCAGGCATCAAATGCCAGGTTGACCGACTGAATTTTCCTTGCGGCTGCACTCGAGAAGGCTGTGGAAATACATCAGGGCGAATTGAATTCAACCCCATGAGAGTTAGGACTCACTTTATTCATACATTAATGCGACTTGAGCTTGAAAAGAAGCAGCAGAAAGAAGAGGATGAACTTCGACGGCAACAGCAATGGACTAACCAGGCTTCAAATAGTGTCAGTGAAATTTTACCAGATGCCAGTTCATCTTCTAGTACTGAGATGGAATCTTGTACGGATGTTGGATCCTTTGGTACCATCTCAAATTCGGACCCTTCAGTACAAAATGATGATCAATATTTTTTGGGTGGTCAACAAGGATATAGCCAGCAGTCACTTCAGCAGCAAGGACAAAGAAGAGTGCCAATGTTTGTGATGAATCAAGAGAATTTTTCTTATTCTCAATCTGGGAACAATTACAATGCAGCACAAGGAGCTAGTTATTCTGCAGCTGGCTCTTTTAACTATTCCAATAGTCAAGCATCCCAAGATGTCAATtatcagcaacagcagcaattTAATTTCCAATCTTACCAAAGTTCATCCCTCCCATCTATATCTAACATTACTGAAAATTATAGGAATAATATATATCGAGAGCAGTGTCCTGGCCGGACAGAGGATCAAAATTTTGTTAATGGATCATCATGTCAAGAGCAGCAGCTTGGGCTTTATGTGAGTGAACCTTGTGAACTACCTCTCCAAAATGCTGATGATGACTCTGCCTCCTCAGCAGAAAGTACCAATTTGGGCCAATTCACAGCTTTAAATTCTGTATGTACGTTAAGTAATCAGTTAGAGTCATATTCTTCTATGTTAGGGGGTAGGTGCCAATATACACCCTCTTCAACTGCGTGTGAAGACAGATCAGGGGAATCAATTGATACAAATGCTGATGTAGATGGCTCACAATCTAGTGATGGTACAACTAGagaggctgctgcaggccccTCAGATGACTGTGATGAAAACTTTGGGGAAATAATTAAGAAGTCAATAGTTGAAACTGTATCTGCATGA
- Protein Sequence
- MDATAGDRVEENTPPEISSTVTPPVSANEPVLQGLATLLVTPPASSSSSLPHTAAPKGGGEVDMTIKCSNMLDTIVSETNGGENVIGPSSESSRRDSATNDWPGTDLVRQEEKKNCDSTTEQELTLEGSQTRTDLNTADELSTTKCSSGEVRGASDNHSQLSLEQSNQVLDAVCAGNVSGVVSSDKIVNGELCKVTDLSATTLEDVVQTKSACEESKTNASTVDKTLVSTNLLGPLQDSSQNIEEQEALIESQDRSDGSDSGLGSESAEALSSNSADELCIGNTCDTENFCVVNNFKDSDISTDAAEIQIGNSFAVSDNKFVSNSSSADVQNLFIKSKPLSDCESRSIVSEFANGDDVLSICKSSVNPHSENENVHVAITEKQSCGSGSMSECNQSLLLDGKDHQLLVKNYGAAPSTSVKLVNKSDIFEPSQSLYPILRDCVANLGQTEYPSVNSNCHMLQCETSFQSDDSVVPTSANSCQNSVTPQDCISNSEISRENLKLSSPSKNLSVLTEDVEADFSQRHSAFISDKLESESSYKNVNGEVAGNMNCMSTSINDTLTNDCLGGTGTLSEDNIPTFDDLRTPPGETDFKASSVEEIDDDVPLQTPTVTLAPILSDFSLKADILGQVTMPTMVCEGGDGVDELDFPHAQDKTESVSVPSSESTASESLAGPSRSLSVSDENTNTNRRRRSTLKRPATSSCEDESKPKRKRSIVFDSVSVYYFPRTQGFTCVPSQGGSTLGMAQEHSHMHRFTMVEHAIEQRRAHRNMLMQLRRSTELGDGSNCAAPTSSSGGGADESSDDSDSDEEQSEMSEEEMDMDGYYFLQPVPTRQRRALLRAAGVRKIDSVEKDECRDIRSSREFCGCGCKNFCDPETCSCSQAGIKCQVDRLNFPCGCTREGCGNTSGRIEFNPMRVRTHFIHTLMRLELEKKQQKEEDELRRQQQWTNQASNSVSEILPDASSSSSTEMESCTDVGSFGTISNSDPSVQNDDQYFLGGQQGYSQQSLQQQGQRRVPMFVMNQENFSYSQSGNNYNAAQGASYSAAGSFNYSNSQASQDVNYQQQQQFNFQSYQSSSLPSISNITENYRNNIYREQCPGRTEDQNFVNGSSCQEQQLGLYVSEPCELPLQNADDDSASSAESTNLGQFTALNSVCTLSNQLESYSSMLGGRCQYTPSSTACEDRSGESIDTNADVDGSQSSDGTTREAAAGPSDDCDENFGEIIKKSIVETVSA*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -