Ffus006613.1
Basic Information
- Insect
- Frankliniella fusca
- Gene Symbol
- CAMTA1
- Assembly
- GCA_029379305.1
- Location
- JAHWGI010000318.1:392709-418255[+]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.2e-43 3.6e-39 133.9 0.9 9 116 10 115 5 115 0.97 2 3 0.5 1.6e+04 -3.6 1.6 63 93 269 299 241 314 0.58 3 3 0.12 3.8e+03 -1.6 2.1 13 86 1438 1518 1432 1527 0.65
Sequence Information
- Coding Sequence
- ATGCAAGATGTACAAGATAAGTCGGAAATGAGGGAGATTGCCGCGGTACTCATCGCCTTTGAGCGTCATGCAGACTGGCAGTCCAAGGAGGTCAAGATCAGGCCCAAGAGTGGCTCCATGCTGCTGTACTCCCGGAAGAAGGTCCGGTACCGCCGGGACGGCTACTGCTGGAAGAAGCGTAAGGACGGCAAGACGACCCGCGAGGACCACATGAAGCTCAAGGTCCAGGGCACCGAGTGCATCTACGGCTGCTACGTTCACTCCGCTATCCTGCCCACGTTCCACCGGCGCTGCTACTGGCTGCTCCAGAACCCCGACATTGTGCTGGTGCACTACCTCAACGTGCCGTACCCGGACGACAACAAGATGGTCTCCATCTCGCCCAGCCTTGCGCTCTGGGGCGACAAGAAGGAGTGGACCAAGGAGGAGCTGGTCTCGCAGCTGAAACCCATGTTTTACAGCGAGGATGAGCCAGACCACAACAACGAGCTCGAAATATCGACCGCCGAGACGGTCGAGTCCATCGTGACGCAGCTGAtggagcggcagcgggcggcgcgggccgccacCCTGTCCAAGCAGCTCGAGTGCGGCTGCCCGGACTCGACGTGCGCCGACGGCAAGACGTGCTCGCACCCCATCCGGCGCATCACGGCGGCCAAGCCGCAGCTCATCTCGCTGGACCGCAGCAACCAGGTGTCCTCGACGACGGGCACGGGCTCCTCGCTGCAGGTGCTGGCGCAGGTGCaggcgcagcggcagcacgcgcagcacgcgcagcacgcgcagcagcacCTGAGCGAggcgcaccagcaccagcaggcgcaccagcgccagcagctgcagcagcaccaccagGCCGCCGCCCAGCTtgtccaccagcagcaccagcagcagcaacaacaccagcaacagcagcagcagcagcagcagcaatcgGCGCCGCCGCTTGTCCTCAGCCTCAGCCAGATCCAGACGAGCAGCCTGCTCATCCTCAACAACGCGGCCAACGGCCAGGCGAACCTCGGGCCGGCCTCGGCGCACCAGGTGGCCACCGTCACGTCGTTCGTGCGCAacgtgccggccgcggccgtgcccggcctgcaccacccgcaccacaaccaccacaaccaccaccaccaccaccacttggTGCAGCAGATGAAgccggccgtggccgaggccaagGCGGCCGCGTCGGAGGCCTCGCTCCTCAtgaagcaggagcaggagggcatGGAGATGAACACGTGCCGCATGGCGGCCATGACGGCCGTGAGTCAGAGCAGCAGCACGGTGGTCAGCGTCACCAGCTCGGCCTGCAACATGGACGTCACCAACGGCAACATAGCAGATTTTGTTATGTATGATAACATTGGCTTTAGCCAAGAAACACAGCACCTCCAGGTTGTAAGTAGCGCTACCAATCAGCAGGCTGTTCATGTCGACAAGCAAGCTAGTAGCCCCCCTTCTCCTTCTAAGCAAATGGACACGAGGTGCAGTCCAGATTTGCTTGAAGCTCAGCAATCTTTCTGTGATGAAGTTGTAGGAAATAATAGTTGTGTTAACAAGTCAAATGGGAACAGTGGAACAAACAGCAGTAGTGATGCTAGCAGCTCGGCTGGATTCTTTGATGCACTTGAGATGACTCAAGAAGATATTCAGCGCACATTGTCTGCAAATATGCCAATGTCATGTACATCTGATCAAAGGTTACACACACCAATGGACACTGTGACTTCAGTGCAAGAAACAAGCCCTGATGAGATGTCTCCCCATGACATTAATCCCATGGACTTTATTGAAGGCTGTGAAGTTGTGTCTGGATCTGCAGATGATGAAGATGTTTTTGTCAATCTGGATGCATTTGATATGCTTGGTGACTTTGTAGATATGGATGGCCTTGATAATACAGCCGAAAATTCATCGCAAAGTTCTCGCATGATGGTAAATTCTGAAAACTCTGAATCTCCATCAGCTGGCAGCATGGATCACAACCATCAACACACACAGCCTCAATATCAAGAGCATGCTCTGCTTGACATTAAGCCAGACCATGATGCTGTCCTAAGCCAATTGAAACAAGAAGATGATCATAGCACTTCAGAAGAAAACCAAGACTCGCAACAACAGCGGCAACAGCAACAAGAACAAGAACAACAGCCACAAATGCAtcagcaggaacagcagcagcagcagcagcaagtacATGAACATCAGATAAATGGAAATAGTACTAATGATGCTGGTCTTCCTTCTGttgaaataacagaatactcACCTGAATGGGCATATCCTGAAGGTGGCGTTAAAGTTCTTGTTACTGGACCTTGGTATTCATCTTCACCTTACACTGTTCTATTTGACTCCCTTCCTGTGACAACAACTCTGGTTCAGGAGGGAGTTCTTCGGTGCTATTGCCCTGCCCATGAGGTGGGACTAGCGACACTTCAGGTTGCCTGTGATGGTCAAGTTGTTTCAAACTCAGTCATGTTTGAATACAAAGAACCTCCCAAATCTCCAGTGGAAACAATGGGGACTGTACTTCAGGATCATAAGCGTGATACAGCTGACTCCAATTCTTTGCTCAAACTTACCTTACTTCATCGGCTGGAGACGGTTAATCAACGACTTCACATCAAACAAGAACAAAGTGACCATTGCTCTGACTTGATGGAAAGTGTTGGTGATCTTGAAGATCGACTAGTTGCGCGAACCCGGCGTATGTCTTCCTGCCTGTGGAAGGATGTAGAAATGCCTGTGCTGACAAGTCACCGTAACATGACCTTACTGCATCTGGCTGCAGCACTAGGATACTCTAGACTTATCGGAGCTCTCATACATTGGCGGGAGGAGAATTCTTCTCCAATCCTAGACTTAGAAGTTGATGCAGAAAGTAAAGATGAAGTAGGCTTCACTCCGCTGATGTGGTCATGTTCTAGAGGGCATACAGAAGCGTCTCTAGTTTTGTTTCGCTGGAATTGTTCATCATTAGATATGGTTAATATTTTTAATCAAAATGCCCTGGATCTTGCAAGGGCATCTGGTTTTACAGCCCTCGCAGGGgaaatatcaaaattaaaaaGTGATCGCTTGAAGACGCGCGCAGTGTCTCCTTCTAGCCAATCAAATGATATGCTCTCATTACTTTTCCCTCCATCACCGTCTCCATCGTCAGGTCTTTCCCCTTGCAGTTCCATAGTGTCTCTACCATCATCAGCGGCGTCATCCTCGGCCTCCCCATGTGTATCTGTTTCTACTGTGAGCACTGACACTTCTCAAGACAGTTTGTTGGAGTCCAGCCCCTGGACCACTCTCCCCTCATCAAGATCACATGATGGTGTATTTTTAAGACCCTTGGCAGCCAGGAATCGGAATGAGGGACAAAAAAACAAGAACTTAGAGCTTCAGGTTAACATTCCAGTTTCACCCTCTCCTAGTCTTACTAACAATAACTTGGACACTCCAGCAGATGTTGAGCAAACAGACAGTCGACAAGTACAATCTCAGAAAAGAGGAGCTCATCATCTTATCAAGAGGCCATCAGTTGACAGTGGCATTCACCTTAGTTCGGGACAATCTATTCAGTCATCTTGCGACAGTCTAGCCTCTCTCAGGTCTCTTAGAAGCAGTCGTCTTGGCAGAGACAGTTCTCGAATTTCAAGGTTTGATCGCAGTATGTCCCTACCACTGAATTCTCCAAAGTCTGGGGGTGATGTCTTTGGTTCAAATGGATGTAACTCACCTGCTCGGAGAGGAGACTTTTCACTTTGCGAAGTTACATCTGGAGACCGGAGTGACAGTCCTCTTATCGACATTGAAGGAGTTTCGGACGAAGAATCGGAGAGCAGGGAAAGTGTCGTAGGGCAACAAGAGGTTCGAGTTCTTACATTAGCGGAGCAAATAATTGCTGCTATTCCAGAGAGAATTAAGAATGGCAGTGAAGATTCAATGATGAGTGATGATAGCTCCTCTCCTGGTGACCATAAAAATGAAGTCCTTGATGTTTTTATGGATTCCTCTCTTCTTGATGAGCCCCCTAGTTCAGCCTTTGAATCCAATGAATTTAACTTTGAATTCAGTGATCACAACTATCGGTATTATGATGTGAGCACTCCGAGCTCTAGTCTTAGTCCCTCATCGTCAAGCTGTCTTCAATCCCCATGTTCTTTTGTACTTGAATCATCACCATCTCCTCCACCAACTACCGCagacttttgtgaatttttccagGCATCTGGTTCATTGTTTGAAAAAGATTTTTCTAATCTGACACTATCAGATCGTGAGCAGAGAGAACTATATGAAGCTgcaaaaatcattcaaaaagcCTACCGGTCATACAAGGGTCGGAAAATAGCAGAGGAACAAGAGAAGGAACGAGCTGCCGCCATTTTGATTCAAAATTATTATCGTCGTTACAAACAATACGCATACTTTAAGCAAATGACACATGCAGCAACAGTAATTCAAAATGGATTCCGTTCCTATCAAGAGCACAAACGTTTCAAGAAGAGCCAAGAGGCTGCTGTTTGCATTCAGAACTACTACAGAAATTACAGAGAGCATGGAGCACGGTCATCTAGTCCATCCAATTCTAGTCCAAGCTTTGAAAGTGCGCCATCCTCAGGCCTCAAGAGAACATATTCCCAACGCCGGCAACATCAAGCTGCAAGGAAGATTCAGCAGTTCATGCGTCAGTCTAAAAACAAGTTGCAGACAGAACGAGCTTTGGCAGCCGCAAAAGAGAAGCAGTTGGACCTGTCGGTGTTCCTGGCTGCCCACCCAAGGTAG
- Protein Sequence
- MQDVQDKSEMREIAAVLIAFERHADWQSKEVKIRPKSGSMLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKMVSISPSLALWGDKKEWTKEELVSQLKPMFYSEDEPDHNNELEISTAETVESIVTQLMERQRAARAATLSKQLECGCPDSTCADGKTCSHPIRRITAAKPQLISLDRSNQVSSTTGTGSSLQVLAQVQAQRQHAQHAQHAQQHLSEAHQHQQAHQRQQLQQHHQAAAQLVHQQHQQQQQHQQQQQQQQQQSAPPLVLSLSQIQTSSLLILNNAANGQANLGPASAHQVATVTSFVRNVPAAAVPGLHHPHHNHHNHHHHHHLVQQMKPAVAEAKAAASEASLLMKQEQEGMEMNTCRMAAMTAVSQSSSTVVSVTSSACNMDVTNGNIADFVMYDNIGFSQETQHLQVVSSATNQQAVHVDKQASSPPSPSKQMDTRCSPDLLEAQQSFCDEVVGNNSCVNKSNGNSGTNSSSDASSSAGFFDALEMTQEDIQRTLSANMPMSCTSDQRLHTPMDTVTSVQETSPDEMSPHDINPMDFIEGCEVVSGSADDEDVFVNLDAFDMLGDFVDMDGLDNTAENSSQSSRMMVNSENSESPSAGSMDHNHQHTQPQYQEHALLDIKPDHDAVLSQLKQEDDHSTSEENQDSQQQRQQQQEQEQQPQMHQQEQQQQQQQVHEHQINGNSTNDAGLPSVEITEYSPEWAYPEGGVKVLVTGPWYSSSPYTVLFDSLPVTTTLVQEGVLRCYCPAHEVGLATLQVACDGQVVSNSVMFEYKEPPKSPVETMGTVLQDHKRDTADSNSLLKLTLLHRLETVNQRLHIKQEQSDHCSDLMESVGDLEDRLVARTRRMSSCLWKDVEMPVLTSHRNMTLLHLAAALGYSRLIGALIHWREENSSPILDLEVDAESKDEVGFTPLMWSCSRGHTEASLVLFRWNCSSLDMVNIFNQNALDLARASGFTALAGEISKLKSDRLKTRAVSPSSQSNDMLSLLFPPSPSPSSGLSPCSSIVSLPSSAASSSASPCVSVSTVSTDTSQDSLLESSPWTTLPSSRSHDGVFLRPLAARNRNEGQKNKNLELQVNIPVSPSPSLTNNNLDTPADVEQTDSRQVQSQKRGAHHLIKRPSVDSGIHLSSGQSIQSSCDSLASLRSLRSSRLGRDSSRISRFDRSMSLPLNSPKSGGDVFGSNGCNSPARRGDFSLCEVTSGDRSDSPLIDIEGVSDEESESRESVVGQQEVRVLTLAEQIIAAIPERIKNGSEDSMMSDDSSSPGDHKNEVLDVFMDSSLLDEPPSSAFESNEFNFEFSDHNYRYYDVSTPSSSLSPSSSSCLQSPCSFVLESSPSPPPTTADFCEFFQASGSLFEKDFSNLTLSDREQRELYEAAKIIQKAYRSYKGRKIAEEQEKERAAAILIQNYYRRYKQYAYFKQMTHAATVIQNGFRSYQEHKRFKKSQEAAVCIQNYYRNYREHGARSSSPSNSSPSFESAPSSGLKRTYSQRRQHQAARKIQQFMRQSKNKLQTERALAAAKEKQLDLSVFLAAHPR*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00733109;
- 90% Identity
- -
- 80% Identity
- -