Ffus017336.1
Basic Information
- Insect
- Frankliniella fusca
- Gene Symbol
- SNAPC4
- Assembly
- GCA_029379305.1
- Location
- JAHWGI010001142.1:148362-151659[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 7.9e-05 0.1 13.5 0.0 20 46 259 288 256 288 0.87 2 5 4.4e-11 5.8e-08 33.5 0.2 1 39 294 334 294 341 0.91 3 5 4.9e-11 6.5e-08 33.4 0.7 1 42 347 392 347 396 0.96 4 5 1.6e-12 2.2e-09 38.1 0.0 1 46 402 447 402 447 0.98 5 5 2e-14 2.7e-11 44.2 0.7 3 45 455 497 455 498 0.98
Sequence Information
- Coding Sequence
- ATGGAAGACGCGGACGAAGAAAAGGTGAAGCTCTTGGAGTCTCTTCGCTTGCAGGATGCTGCACTGTCAGTGGTTGTGGGTAACTCTTTTGTGACTCTCGATAGTGACTCTGATGTCGAAGCAGAGTCAGGGGAAGATGTGGCTCTGTCAACTGTAATTGATGGCAAGATTCCCGGTTTCAATGAATTGGATTCATGTCCAGCTGTTGATGAAGAAAGCAGAACCAGCAATGACTCGAATAACTGTAAAAATCCGTCATGGGCTGATGCCCTTGAAGCGAATCAAGAATATGATTCTGTATTAGCACAGCTAGAATCAGAAATCAAGCAAAGTATTGCCAAGGTGGTCAGGCAATTGAATGAAGTCCAGAATAGTATTCAACAAATACATAACTCTAATTCCCTCCTTAACATGAAGAGCCAGTTTTTATATGTTTTTGGTATGCCATACTTTAAGACAGAAAATTATTATCCATGTCCATTCAATGAAGATTACCACAATAAGAAAAAGAATAGAGAAATTTGTTATTCAGAATTAGGAACATTTCACCAGTGGGTTCCACGTCACAAGAAATTATTGAATGAAGCTGTGGCCAAGTTTgcatttcaaaaatgtttaaaaGAGGCAAAGCTTAAGTTAGCTGTTTTACGTAAAGAGTTAGATATTTTCAAAACTTCAGGAAATGTCGAACGAACCACCGAACTCGAACAAGAACTGCGGGATTTTGATGTGCGGTCAGTTGCTGAATCAATGCTTGATGATGAAATTGCAAACGGTGATCATGATTGGATGAAAATTTCAGCTTCAGTCCTCGATGGAAAGCAATCCCCTGAAAGCTGCAAAAGCTTTTGGAACTTGTAtttacaccctaaaataaataAGAAGGCCTTTACTGAAGATGAGGAATGTGAACTTCTTAAATTGGCAGAGAAACACAAACATCAGGATTGGGACAAAATTGCAGAGGAGCTGGGAACAAACCGTTCAGGCTACCAGTGCTTCATTGTTTTTCAAAACAAGCTTAATGCTGCCTTGAAAAGAAACACTTGGGAACCCTGGGAGGACAAAAAACTTCTGCAAGCTGTTGAGAGGCACAGAATTGGAAATTTCATTCCATGGGGAAAGGTTGCATATGATATGGAAAACCGCACTAAAGCTCAAGTTTTCAACCGCTGGAGCTACTCTCTCAATCCTGCCATCAAAAAAGGAAGGTTCACTGAAGATGAAGATATCATGATTCTAGTTGGAGTGCAAATGTGGGGTGAAGATTTTCAGAGAATTTCGCATTTTTTGAAGGATAGAACTACAAGCCAAGTTCGCGACCGATTCAGACATTACCTTAACAGAGCCGGAATGGGTATTCCATGGACTTCTGATGAAGATCAGAGACTCCTTGAATTAGCTGAAAAACATGGAAGAAAGTGGGCAATAATATGTAAATGGTTTCCTAATAAAGATCGCACACAGGTTCGCCATCGTTATAATACCTTGGCAAGATGGAGGGCCAAAAATCCAGATGCTCCTTTAACTGATGCTCCAGCCCGTCCTTACGTGCCGAACCAGAGCAAACACTTTCAAGAGCAGTGGAACAGAGCAAAAGATATATTAAGCTGTGATACTATAGAGGATATGATGAAAGCAAAGAATGATCTTGTGACATCTTTGactaaaaagaaaaggaggtcTATATTagaagtgaaaaagaaaaagaagccaTCACCAATTGAGACAGATCTGGTTAATTATTTTCGGTGTAGCTATGAATTGCCTGGTGGCCCAAGGAAGGTTTCTGTACGGAAGGAAGAGGCAAAGCAGTATGCGAAAGAACTAAGTGTTCTATTCCAGATgtttaaattgaaattgaacCTACCCTGTGTTCAGAATATTGAATTTGATAAATCTCTTACCTCTGCTGATAAGGATATACTTACAAACCTTGTTCTAGACACAATCGACTTAGAAGACCCTTTATCTGAGTccaacactgtaaatcaatCTAACCATGATTTGAGGGCTTTGGAAAATACTACCACACAACTTTTTGGTGATGATACTGAGCTATCTGAAGAGGATCCTCCTTCACAAGagtattcaaaaaatattgacTATGTTCAAAGTCATGATATTTCTTCCCTGTATATTGACTTACCTCTCATGAATTTTACTCAAGATGAGGTAGTTGCTGACAGAAATAAAGACCCTTCATTTTTTGAGCCCCCTTCCAGGCGACCTGGAATTTGTGATACAGCCATGAAGAGAAGTCCTGTGAAGGGGAAGGAAATGTACATTTGCCCACCCAATTTAACAACTCTTGTTGGTTTGAGAACTTTTCTATTGAACAGGCGCAATTTGGTTGCGAGGTGCAATAAAGATCTAGATAAAGAAGATTTAAATGGAGTAAGCTTTGAAAAGTTAGAGGAAGCCAAGAAAAAGTTTGATGAAAGGATGTTTTGTCTTTTCCTCTGGCCAGCCCTCATGTCAAGATATGGACCAAGTGACAGCTCAAGTATCTTTGATGATGAAAAGAAGAAACCTGCTACCGTTCCAAATCCAGTCCCTATAAggcaaaaaagaagaaagaaatccgaaaagaaaaaggaatctGCATTTGATCAGGACCTTAGCACTCACCCCATATCTGAAAGTCAAATGAACCTCCCATCAACTTCGAAAGATAGTTCAAACCAAACAATCAAAAGACCTGCTGATACCTCCATCCCTAGTACATCAGGGTTACCTACTAAGAGACGTAAAATTGTGGATATGGAGTCAGATGATCCAGATGATCCAGATATTGTGTAA
- Protein Sequence
- MEDADEEKVKLLESLRLQDAALSVVVGNSFVTLDSDSDVEAESGEDVALSTVIDGKIPGFNELDSCPAVDEESRTSNDSNNCKNPSWADALEANQEYDSVLAQLESEIKQSIAKVVRQLNEVQNSIQQIHNSNSLLNMKSQFLYVFGMPYFKTENYYPCPFNEDYHNKKKNREICYSELGTFHQWVPRHKKLLNEAVAKFAFQKCLKEAKLKLAVLRKELDIFKTSGNVERTTELEQELRDFDVRSVAESMLDDEIANGDHDWMKISASVLDGKQSPESCKSFWNLYLHPKINKKAFTEDEECELLKLAEKHKHQDWDKIAEELGTNRSGYQCFIVFQNKLNAALKRNTWEPWEDKKLLQAVERHRIGNFIPWGKVAYDMENRTKAQVFNRWSYSLNPAIKKGRFTEDEDIMILVGVQMWGEDFQRISHFLKDRTTSQVRDRFRHYLNRAGMGIPWTSDEDQRLLELAEKHGRKWAIICKWFPNKDRTQVRHRYNTLARWRAKNPDAPLTDAPARPYVPNQSKHFQEQWNRAKDILSCDTIEDMMKAKNDLVTSLTKKKRRSILEVKKKKKPSPIETDLVNYFRCSYELPGGPRKVSVRKEEAKQYAKELSVLFQMFKLKLNLPCVQNIEFDKSLTSADKDILTNLVLDTIDLEDPLSESNTVNQSNHDLRALENTTTQLFGDDTELSEEDPPSQEYSKNIDYVQSHDISSLYIDLPLMNFTQDEVVADRNKDPSFFEPPSRRPGICDTAMKRSPVKGKEMYICPPNLTTLVGLRTFLLNRRNLVARCNKDLDKEDLNGVSFEKLEEAKKKFDERMFCLFLWPALMSRYGPSDSSSIFDDEKKKPATVPNPVPIRQKRRKKSEKKKESAFDQDLSTHPISESQMNLPSTSKDSSNQTIKRPADTSIPSTSGLPTKRRKIVDMESDDPDDPDIV*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -