Basic Information

Gene Symbol
Arid2_1
Assembly
GCA_029379305.1
Location
JAHWGI010001046.1:579497-608685[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.5e-25 4.3e-22 79.1 0.1 1 89 15 101 15 101 0.95

Sequence Information

Coding Sequence
ATGGCCCAGGTTCTTAATAAGGACCCTATCACATATCAAAAAGAACGCGATGGATTTCTACGGGAGCTCCAACACTTCCACGAGACCCGGGGgaCTCCCTTCCGAAGAGTCCCACAGATTAATGGTCAGGAGGTTGACCTATACCTCCTCTACGTCCTTGTTACCGCGCATGGAGGCTGGTTAAAGGTCAACTACAAAAATGAGTGGGACGACCTTATGGACCAGTTCAAGCTGCCGCAGCAGTGTGTCAACGCTGGCGTCGCGCTCAAGCAGGTGTACCTCAGGTACCTGGACCGGTACGAGAAGGTGCACTTCCTCGGGGAGGATGGCGGCCGCGCgagcgacgaggacgacgacagcAGACACAAGCGGTGGTCGGCCCGCGTCCTGCACTCGGTGCCGCTCGTCTACAACACGCACCAGCACATCCTCAGCGAAACTCAAAGAGCATACCATGGACTCTCAACAGACCTCTACAAACCGTCAGACTATGACCGACTGGCCATGTCTTTGATGTCCCCTCTACCTAATGAGCAGGACTTTGCCATCAATGTGTGCACTCTTCTTTCAAATGAGGGAAAGTACACATTAAAACTAGACAAATGCCCAAGGCTTGTCGACTTTCTACTGGCACACGCAGCTGTTTTTAGTAATGagGGAACCAGAGAATTATTTCAAGAAGTTTATGGCAAAGTTCGGCATAGTTCTATGACTCACTTCTGGGCTGATGTTCTTGAAGATGCTGAAATGCTCCACTTAACAGATGAAGCTCAGTGGCCTTTGAAGTCAAGACCCTCAATAGTCCCAAGTTTCACAAGGACAGATAGTTCAAATTCAATAGAAAAAAGTCGTAATAGTAGTAGTAGAGAAATATCTGAAAGTGAATATGACCTTGATGAATGCGGTGTGCGGTTGGGTTACCCTAGTAATGTTTTTCTTGGAAGAAGAAAAAGTGGGGAGAGTTCAAAGACTGATCATGAAAAAACTAAGAAACCCAGAATCGAAATTGAACCGTCCGATTTAGAACTATTTTGTCTTGGCAGAACACTTGGCACACAAGATTATTTAGGCCAGAGAGTTGTGCAGgtGTCAACAATTTTAAGGAATTTAAGTTTTGGAGAGGAAAATCAATCTGTATTGGCAACAAATCCCACTTTTCTCAGATTTTTGTTATTATGTTTGCATTCCCGATGGGACACACTAAGACAGCTTGGGTTGGATGCTTTGGGAAACATTGCATCTGAACTGCAGTTGGAGAGATTAAGTTCTGATGCTCTTCTTCAATTAATTCTGACAGCAGTCACACAAAGGTTATTTGGACAAGATCGTGCTGGAATTATTGCAGCTTTAGAAATTTTAAATAAACTTGGACAGCGAGAGGACAATGAAGATGCATTGCAACGGTCTTTAGATGGAAAGGTCTACGAACAAATCATCCGGTATCTGACTCTTCACGATATAATGCTACTTGTGCAAACCCTTGAATGTTTGTATTCACTTTCTTCACTTGGGGAACGGGCTTGCAACTTCATTGTCAGAATTCATGGAGTTGTTGATACTCTGGTGTCACTAATAACAGTGGAGGCGCAAAGCTATGGTCCAAAAGCATGTATTCTGATGAGAGTTGTTGAAACTATTTCTGGTCATGAAAATAGTGGCCACAACAACCATCTAACAGTCATGCAGAATGCAGCACCATCACAGGTTGCTGAATACCCTATGGCTGGACACTCGGGATCAGTGATGCAGCATACTTTGAACTCAGTTAAAAAAGTGTATCCATCTCCCATGATGACTAAAGTTACTCCAATACGTCCTGCATTTACCTCTACTCAGTCTGGCTCTGGATCTCCAGTTGTGACCCTTCATCCACAATTGGCTTTGCAACATCAAAATCCACAACAGCAAACAATGTTCCCTCCATCATCACAGCACTCTAGTTTTCAAGCTATTCAATCAGTTCAAACCAGTGTTCAATCATTGCAGCCCCAGCAACAAAATCCCTCCTTGCAGGCATCCATATCACAACCCTCAAGTCAAATGATGTCTGTCATTGCACAAGCTCCTCCAATGTCAACACCTGCTTCTGTAATACAACACCCTCCATCATCTCAAAGTCCCCAACCCACCGTGCCTCGGCAAGCGGGAACGCCTCCCCCTGCTACTCAGGTTCCTTCAGGACAACTCACTGCTCAAGAAATGGTTGTCAGAGAAAATGAACAGTTTGCTACATCTTTCCTGCGTTCAACGTATGAAAATGTTCCTGGTTGCCGAGTAGAACAAAGTGAAGTTTACAATAAATACCTCAGTGCGTGCGCCAAGGCTGGAAGAAAAGGTGTCATAGCACCACACCACTTCCCAAAATGTGTTAGAACGGCTTTTGGAGTTACATCTGTCCCAGTGGTAAAACCGGTCACGCTTGCTGGAGATACAACACCATCAGGACACAGCAAGCAGCTTTTCTATGAAGGAATCAAGGTGCGACCCAAGCCAATTCCTGTCAGTGTGGAGGCAACTGAGTCTGCCTCTATAGGCGTCTCACCCATAGACAAAAAGAAGCTTCTTAAACCAAAAAAACTATCAACAACGGGTGGCACTGCACCAATAACTAGTAGTTCAAGTTCAGACAAAAATGCAGTCCCTGTCCCTCCAACTTCGGTTCCCTCTTCCTCAACGGCGACCTCTGCCTCTTCAACCTTTACCCCCACATCCTCTATTCTCCTTAGTCAACTCAGCGCACCCCCTAAGCCCAAGGATACCCCCGCAACTGCGGAAAATGCCAATCAGGTACGCATGGATTTCTATTTAATTAATTATGGTGACGGGCTAATAGCGCTGTTGCTACCTTTCCTAATTGTTGTAGAAAAGCCACCCTTTAGgTGTAAGAGTTCATATCTTTTAGAAATCTTTAGCATATTTTATGTTGGCCTCAAGGTTACTTCACATCCACATCTAAGTCAAGCTCTGGGTGGCTCTGAAACAAACCCCTCTGGGAGTACTTCTGCTGTTGCAAGTACAAGCTCAAACAATTCTGTTCAATCTGCAACCTCTGGAGCTCAGCCTACAAACACCTCTCTCATCAAGAGTTTACTTGCTACCAAGGTAGGCGAGACTAGCATGTCAAGCCCACAGCCTGCTGGCATGATGAGTGGAAACATAACCAGCTATAACATCGACGTCGGCAATATCCAGCAGGTTGCTCAGCGTCAGCGTttgcagcaacagcaacaacagcaaccaGCCCAATCAGAACAGATGCCAGGTGTCCATCTGCAACAGCCCAGTCTCAACCTTCTCAAAAAGCCTTGCAACCCCAACAATCTGAAACTCCAAGCCCTCAAGCACAGGTTCAAGCACAACCAAATGTTGCCATCTCTTCTCAACAGGCAACTCAAGGACTATTGCTCCAGCAACAGTTGCTTACACCATCCAGTCAAACCCAATGAGCAGCAGCCTGGTGCTATTTTAACGTCGACTATTGTTAATCACCAGGGCAAGGCTGTAAGGGTTGCAAGAATAAATGGAGCTCGTGCCCCAACTATAATTCAGATTCAGCCCAAGGGAGATGGTTTAGAGGCTGAAAATCATGTTGGCGGAACTGTGTTACAAAGCAGAAGAGatccaccccaacccccaccaccgccactaGCTCCTCTTAGCTCTGGACCTAATCGAATAGTTACCCAAGAATCAACTGATGGTGCAAGTGTGATAAAATGTACAAATAATTTAATTGTGTCTGATGAACATTCAACCAAAGCCAATAATCAAAGTGTGGAAGGTGTACTTGTTAATGGTGCTGCTCATGGAGAAATCAAAACAGAAATCAAACAGGAAGAGGCCTCTAATGAAGATACCTCTAAATCTGTGGGTAAAGGAAATCTAATGCTGGTTGACCTCCTTGACAAGTCTGTTGATGTCAAGGAGCCTCCAGTATTAAATGGTGGTTTATCTTCTAAGGATTTATtaatcagtgaacgaggtctaGAGTTAGTTTCTAAAGGAACAAAGACTGAATTGGGAAAACAAATACGAATCACAGAACGTGGTAGCATTGAGGTTGTTGATACTATTACTGGAAGTACTGACAAAGACCTAACTGGCATGGAGTTAAGACTTACTGAAAGAGGTCTTGAACTAGTTGACAAACAGAGTGAAGTAGCTCCTCCTACTGCTGTGCAGCAAGACAATGTTCTTCAAAAAGAATTGTCTGTCGGTGAAAAGTTGTTAGAGTTTTTGGAAAAGCAAGATGCAAATCTTCAAGATGAAGTAATGGTTGGCCCTGGAGGTGATGTTGCTACCTGTACAAAGAGATCTGCTGAAGATGATCCAGATGACAAGAGTGAGGTGAAAAGGTTACGACTAGAAGTCAATGGTAACGGCTCAAACTCTGGTGATGAATCTAGCCAAGGTGAAGAAAAAGTCAAAGCTTCCTCAGCTGCTGCAAATTTGTACTCTGCCCTTGCTGCATCAGTACTGGAAGATGAAGATCCTGATCTACTAATGGAGCAAGTGCCTCAGCCTCAGGGTAAAGAAGAACCAGCAGAAGTTGTAACACAACCTCAGCTTGTTGAAAAACCTCTTGCCACCCCAGCTATTCAACCAGTGCAGCAGACTCAACTTCAAACACAACCTCAATCACATCCTCCTCAGCAGCCCCAGTCACAAGTGCAATCACAACCTCAGTTGCAGCTGGTTCAGAGTGGAGGCACAATTCGTCAAGTGTTTGTTAGTTCTGATCCAAACCAGTCAGCTCCTGCACAGCAAGTTATGATGGCTGGGACCCGACAAATAATTGTCTCTCAAGCTTTAACAGGTCAGAATCCAGTTCTCATCACAGCAGGTGGCCAAATATCTCTCCAAGGTGGAACAACTGTGACTGGTGCAACTGCAGTCAAAACAGCCTCTGGCCAGACAGTGCTGATGCAGACCAATACCGGCAGTGGTGTGATCACTGGAACAATGGCAAGACCAGCACAGTATGTCATATCTCAACAAGGCCAGCAATTGCAGCTTGTTCAACCCGGAGGTCAGTTACAAATTGCGTCTGGCGGGGTTGGTGGCCAACAGTTTGTTATGGCACAACCGCAAACAGCCCTCATTCAAGGACAGCCTCAGACTGTACTTGTAGCTCAGACTCCCCAACAACAAGGCACCTCTGCTAAAACAATCATCATTCTTCAGCAACAGCCTGGAACATCAGTACCAGTTAGTGGTGTAACTACTCAGGCTGTGCAACAGAAGATAGTGGCTGTCACTCCTCAAGGCCAACCAGTTGTAGTTACTCCCGTCCAAAGGCCTGTGATCCAATCTAGTGCTGTGAGCCACTCAACACCCCCAGCATTAATAGCTACTAGCCAACAGCCGTCTCCTGCCCCATCGCCTGCCCCACCAACTGTTGCTCCTACTGGAATTCCTACTCCTGTGTTAACAGCTAACCCTTCACCAGTACAGACACCATCCCCATCACCCATTCCTACCCCAACAATCACTGCCAATCCAAATGCAAGTGCAGGGGTTCGACCAAATGTTGTTAGACCGAGTCCAACCCCAAGCCCAAATGCTATGATTAGTAAACCAAATGGTGTTGTAAGCAGTACGTCAATTACCAATGCCACTGCAACAAGAATAGGGACTAGGAGCTCCCTTGCAAAGTCAGCCACAGTGAATACGGTCACTACTGCTTCAGCTGGTCCTGCAAGCCCTCAACCCACGGCTACTCCAATTAATTCTTTGACAGCCAAGCCTACAATGCTTGCTGCAAATACTCCTACAAGAGTTGGTGGTATGCCAAGTCCAGCTCCTAGACTCTTACCTAACCAATCTATGTTTCTATGTGAATGGAGAGGTTGTATGAgGAGCTTTAAGTCTGCAAATGAAGTTTATATGCATGCTTGTGAGGCCCATTGTCCATCAGGTAGCCAAGAGATTCAGTGCTTATGGGAAAGATGTGATGCCATGAAGAGAAAAAGATTCTCTCTTATGACCCATTTGTTTGACCGTCATTGTAATGCTGACGTATTACGCATGATGGCAATGAGGAGACGGCAACTGTCTCAAAGTGGCCGTAGCGAAATTCCCCCACctcagccaccaccaccacatccAGGATATGCACCCAATGCAGCTTTTCATGCCATCAAGAGACATGCATTGGAATTTGTTAACCCTAAGGAACTCTTGCATAAACCTGGACCAGCACCTGTCCCTGTTCCACCCGAACAGGATGACAATGAAGGGCCTGTTACCAAAAGCATTCGTTTGACTGCTGCCCTAATTCTACGCAACCTAGTCATTTACTCAAATTCTGGGAGAAGATTGCTTCGGAGCCATGAACCGCACCTAGCGAGTGTGGCGTTAAGTAATGTAGAATCATCTCGAACAGTGGCTCAAGTGCTGTATGACATGAATCATGCCTCAAATAGATGA
Protein Sequence
MAQVLNKDPITYQKERDGFLRELQHFHETRGTPFRRVPQINGQEVDLYLLYVLVTAHGGWLKVNYKNEWDDLMDQFKLPQQCVNAGVALKQVYLRYLDRYEKVHFLGEDGGRASDEDDDSRHKRWSARVLHSVPLVYNTHQHILSETQRAYHGLSTDLYKPSDYDRLAMSLMSPLPNEQDFAINVCTLLSNEGKYTLKLDKCPRLVDFLLAHAAVFSNEGTRELFQEVYGKVRHSSMTHFWADVLEDAEMLHLTDEAQWPLKSRPSIVPSFTRTDSSNSIEKSRNSSSREISESEYDLDECGVRLGYPSNVFLGRRKSGESSKTDHEKTKKPRIEIEPSDLELFCLGRTLGTQDYLGQRVVQVSTILRNLSFGEENQSVLATNPTFLRFLLLCLHSRWDTLRQLGLDALGNIASELQLERLSSDALLQLILTAVTQRLFGQDRAGIIAALEILNKLGQREDNEDALQRSLDGKVYEQIIRYLTLHDIMLLVQTLECLYSLSSLGERACNFIVRIHGVVDTLVSLITVEAQSYGPKACILMRVVETISGHENSGHNNHLTVMQNAAPSQVAEYPMAGHSGSVMQHTLNSVKKVYPSPMMTKVTPIRPAFTSTQSGSGSPVVTLHPQLALQHQNPQQQTMFPPSSQHSSFQAIQSVQTSVQSLQPQQQNPSLQASISQPSSQMMSVIAQAPPMSTPASVIQHPPSSQSPQPTVPRQAGTPPPATQVPSGQLTAQEMVVRENEQFATSFLRSTYENVPGCRVEQSEVYNKYLSACAKAGRKGVIAPHHFPKCVRTAFGVTSVPVVKPVTLAGDTTPSGHSKQLFYEGIKVRPKPIPVSVEATESASIGVSPIDKKKLLKPKKLSTTGGTAPITSSSSSDKNAVPVPPTSVPSSSTATSASSTFTPTSSILLSQLSAPPKPKDTPATAENANQVRMDFYLINYGDGLIALLLPFLIVVEKPPFRCKSSYLLEIFSIFYVGLKVTSHPHLSQALGGSETNPSGSTSAVASTSSNNSVQSATSGAQPTNTSLIKSLLATKVGETSMSSPQPAGMMSGNITSYNIDVGNIQQVAQRQRLQQQQQQQPAQSEQMPGVHLQQPSLNLLKKPCNPNNLKLQALKHRFKHNQMLPSLLNRQLKDYCSSNSCLHHPVKPNEQQPGAILTSTIVNHQGKAVRVARINGARAPTIIQIQPKGDGLEAENHVGGTVLQSRRDPPQPPPPPLAPLSSGPNRIVTQESTDGASVIKCTNNLIVSDEHSTKANNQSVEGVLVNGAAHGEIKTEIKQEEASNEDTSKSVGKGNLMLVDLLDKSVDVKEPPVLNGGLSSKDLLISERGLELVSKGTKTELGKQIRITERGSIEVVDTITGSTDKDLTGMELRLTERGLELVDKQSEVAPPTAVQQDNVLQKELSVGEKLLEFLEKQDANLQDEVMVGPGGDVATCTKRSAEDDPDDKSEVKRLRLEVNGNGSNSGDESSQGEEKVKASSAAANLYSALAASVLEDEDPDLLMEQVPQPQGKEEPAEVVTQPQLVEKPLATPAIQPVQQTQLQTQPQSHPPQQPQSQVQSQPQLQLVQSGGTIRQVFVSSDPNQSAPAQQVMMAGTRQIIVSQALTGQNPVLITAGGQISLQGGTTVTGATAVKTASGQTVLMQTNTGSGVITGTMARPAQYVISQQGQQLQLVQPGGQLQIASGGVGGQQFVMAQPQTALIQGQPQTVLVAQTPQQQGTSAKTIIILQQQPGTSVPVSGVTTQAVQQKIVAVTPQGQPVVVTPVQRPVIQSSAVSHSTPPALIATSQQPSPAPSPAPPTVAPTGIPTPVLTANPSPVQTPSPSPIPTPTITANPNASAGVRPNVVRPSPTPSPNAMISKPNGVVSSTSITNATATRIGTRSSLAKSATVNTVTTASAGPASPQPTATPINSLTAKPTMLAANTPTRVGGMPSPAPRLLPNQSMFLCEWRGCMRSFKSANEVYMHACEAHCPSGSQEIQCLWERCDAMKRKRFSLMTHLFDRHCNADVLRMMAMRRRQLSQSGRSEIPPPQPPPPHPGYAPNAAFHAIKRHALEFVNPKELLHKPGPAPVPVPPEQDDNEGPVTKSIRLTAALILRNLVIYSNSGRRLLRSHEPHLASVALSNVESSRTVAQVLYDMNHASNR*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-