Ffus018001.1
Basic Information
- Insect
- Frankliniella fusca
- Gene Symbol
- cnc
- Assembly
- GCA_029379305.1
- Location
- JAHWGI010001149.1:1531805-1540544[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-18 1.4e-15 57.8 6.3 3 65 529 591 527 591 0.97
Sequence Information
- Coding Sequence
- ATGGAGCAGCGATGGCAGGACCTGGCCAACCTGCTGAGCctgccggcgggggcgggcgcgggcgcggcggggcagcagcccgaggtgcccggcccgctgcaccaccaccaccaccaccatcaccaccaccaccacgcggtgggcgccgccgccgccgccgccgcccagcagcacTACGGCTACGAGGCGCACCCGGGGGCCTCGCCGGCGCGCTCCGTCGTGCTCCACAACGCCACCCTGGCGCCGCCCGTCGGCGACCTCAACAGCTCGAGCGTCTACTccggcctgtccatgggctcgGCGGTGGCCCAGAGCATGAACCTGACCAACAGCAGCGAGCCCATGGGCgacggcgcgcccgcggccggcttCAAGATGGAGCCCCACAACGACATGCTGTACTACCAGAACTCTTCGTCCGGTGCCGAGATGAGTCAGATGACTCCGCTCAACTCGACAACGGAGGGCTTCTTGTCGTCGATCCTGAACGACGAGGACCTCCAGCTCATGGACATGATGAACGACAGCATGTACCCCCTGCGCATGATGGACGGCGCAGGGTCGGCGGCGCTCCCTGGCGGCgcgggtggtgcgggcgcgggcgtcctgcacccgacctcctcctcctcgtcctcgagCACCGCGGCGGGGGGGCTCATGGGGGCGACGACGGTGGCGCTGGGCACGACGGAGGAGCGGCTGGACGCGTCGAGCGACAGCGCCGTCAGCTCCATGGGCTCGGAGCGGGTCGCCTCGCTCTCGGACGGCGGGGAGTGGATGGAGACCAGCTCGGACTCGGAGCCCTACCACCTGGACTGCAAgtaccgcgcggccgggcacCCGCACTCGCACGCCCCCCACGAGTACACGAGCGGCTACCggaccgcccccgccggggccgcccccggggccggggccgcggccggcgcaccCCCGGGCGGCGCGCAAAAGAAGCACCAGATGTTCGGCAAGCAGCGCTACTTCCAGGCCGAGCAGGCTACCGGGGGACTGGCGGTcggacccgcgccgccgtccaTGGCGACGCCCATGCCGCTCAAGCTGGACTTCGGCGAGTCGTCGCGACCcgtggcgggcgcgctgccccagggcgccgcggcccaggcccagggcctcccggcgccgcaccccgcgcaccccggcgTCGCCATGAACGGCAcggtggccgcggggctgaCGGTGCCCTCGGGCGCGTCCGCCTTCACCTCCCCGATGGCCATGGAGGACGAGGAGATGCGCGCGCACGAGCTCAAGTTCGGCTACTACGGCCAGGAGTACCCCCGCCATCACCACGcccggccggcaaTGGAGCCCGTTGCACACAATCATACATATCacctgcctcctcctccggaGAGCAGCGGTGCGAGCCAGCGCCCCCTGCAGCGGGATAAGCCCAGGTCCAAGGACTCCCGCAAAGGTGACGATGCTCACCTTACCAGGGATGAAAAACGTGCCCGTGCTCTTAATGTACCTATGGCTGTTGACGACATCATAAACCTGCCCATGGATGAATTCAATGAAAGGCTATCAAAGCATGACTTAAGTGAAGCACAACTGTCTCTGATCAGAGATATTAGACGCAGAGGCAAGAACAAGGTTGCTGCTCAAAATTGCCGAAAACGCAAACTGGATCAAATTGTTACGCTTGCTGATGAGGTGCAGCAGATGCGCAGTAGAAAGCAGAAGCTACTTCGTGAACATGACTACCTCACAAGGGAAACTGCTCATGCTAAAGACAAGTTCAGTCAGCTCTACAGACATGTCTTTTCGTCGCTGCGTGATGCTGATGGCAACCCCTACTCTCCGTATGAGTACAGCTTGCAACAGGGTCCCGATGGTAACGTGATGGTGGTGCCTCTGACCTCGAGCCCCTCTGGTGGTTCCTCTGTCTCCACCATGGACTCGGTGCATCAGCAGATGTCACGTTCCCTTGCCATGGCCGAGTCTGCCTCTGCCCTCCACTACCCCAGGGGTCCCATGCCTCAGCACCAATCTGATCGTCAGAAGGACCAGcaacaccaccagcagcagcaacatccCCATGGACAACATGCCCCTCACCAtcctcacccccacctcccccaccagacacacccccacccccactcacatccccatccccatcctcaccaccccaacccccacccccctcatcATCCGCACTCAGATCCCCATCGCAAAGATTGA
- Protein Sequence
- MEQRWQDLANLLSLPAGAGAGAAGQQPEVPGPLHHHHHHHHHHHHAVGAAAAAAAQQHYGYEAHPGASPARSVVLHNATLAPPVGDLNSSSVYSGLSMGSAVAQSMNLTNSSEPMGDGAPAAGFKMEPHNDMLYYQNSSSGAEMSQMTPLNSTTEGFLSSILNDEDLQLMDMMNDSMYPLRMMDGAGSAALPGGAGGAGAGVLHPTSSSSSSSTAAGGLMGATTVALGTTEERLDASSDSAVSSMGSERVASLSDGGEWMETSSDSEPYHLDCKYRAAGHPHSHAPHEYTSGYRTAPAGAAPGAGAAAGAPPGGAQKKHQMFGKQRYFQAEQATGGLAVGPAPPSMATPMPLKLDFGESSRPVAGALPQGAAAQAQGLPAPHPAHPGVAMNGTVAAGLTVPSGASAFTSPMAMEDEEMRAHELKFGYYGQEYPRHHHARPAMEPVAHNHTYHLPPPPESSGASQRPLQRDKPRSKDSRKGDDAHLTRDEKRARALNVPMAVDDIINLPMDEFNERLSKHDLSEAQLSLIRDIRRRGKNKVAAQNCRKRKLDQIVTLADEVQQMRSRKQKLLREHDYLTRETAHAKDKFSQLYRHVFSSLRDADGNPYSPYEYSLQQGPDGNVMVVPLTSSPSGGSSVSTMDSVHQQMSRSLAMAESASALHYPRGPMPQHQSDRQKDQQHHQQQQHPHGQHAPHHPHPHLPHQTHPHPHSHPHPHPHHPNPHPPHHPHSDPHRKD*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -