Fsel009072.1
Basic Information
- Insect
- Formica selysi
- Gene Symbol
- Trerf1
- Assembly
- GCA_009859135.1
- Location
- CM020807.1:10210653-10263249[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4 6.4e+03 -1.8 0.1 29 42 838 851 836 853 0.87 2 2 3.4e-10 6.5e-07 30.2 0.0 2 46 1004 1048 1003 1048 0.96
Sequence Information
- Coding Sequence
- ATGGCGAACTCGGAGTCCAGTCGGTATGATCGATTATGGTTTGCGGCCGCGTTGGCAACCGATCACGACCGGATCAAGCTAAATCCGCCGATTGTGAGCGCTACATCTCCCGGCGCCAACAACGATGGCCTCACAAAGCAGCTGGAACTCATCCAGCAATATATGCAACAAAcgcagcagcaacaacaacaGACAACCACGCAACAACAGCAACAACAACGAACTACTACTCCCTCGATAGCGGTAGCCACACAGTTacaaaaaacacaaaaaccGTCCATCAAATCCACCGCGTCGCCCGGCAACATCTCCAACAATTCCGGAAGCGGGAACGCGACCAGCAATGCGAGATCGAGTCCGAAGCCGAAGGTCTGGAGTCATTCGCAGcaacaacaacagcaagcgcaacagcagcagcaacagcaacaaCAACAGGTTAGCTCACCGGGAAACGGAAATGTGGGGAAGGGCAGCCCGTCTCCCGGAAATTCGTCATCTCCCGGTACGGTCGCTACTTCCAAGTCCCAAACCGAGCCGAAACCGGTGGAGTGCAATCTGTGCCatcgaaaatttaaaaacataccGGCTCTTAATGGCCATATGAGACTCCACGGTGGTTACTTCAAAAAGGATGCGGAGAATAAGAAAAGCGAGAAGAAAGAGGTCATCGGGCCGCCTTTGCAGACGGCGTCGGTCAGCGTGAGAGCGCTTATCGAAGAGAAGATTATACAGAAGAGAACGACAGCGGACGCAAATAGCAATCAACAACCTCGTACGAATGCCACCGTCTTCACCACCCAAGCCGACGCCGTCTCCCATATCACCGGCAAAACGAGCTTTGCGGTGCCGGCACCGCCACCATTGGCGGCAGGAGAGAAAGTGCGTCGACTCTCCGATGGTGAACATTTCCGGCAGCCTAATGTCACCGTGAGCGGTCACGCAACCGTGCAGAAGCAATTGCAAGAAGCGCAAACTCAAGCTCAAGCTCAAGCTCTTGCCGATCTGATCCTGAAGGGAGCGAAGGTGGCTGTGAAGAGAACAACCTCCGATCCGGGACAAAGATTACATTTAACTTATCAGCAGCCTGTGCAATCAGCGACCAATCAACAGTCGAATAATCAGCAGCCGCAGGCACAACCTGCGGTAACGGAAAGCTTTACGATGACAGGTTACGCCGAGGATGGTGGTTACTTCAGTCCGAGTCTACAAGACGAAGTGTTTCAGCAAGTCACAACGGTCCCTGACAGCGTGCTTTTGCATGCTACGCAGTTGGACTCGATTCAGTTTCAAACGGCCAGCCTATTGCAAGAACAATCTACCGAACAGCTGCAGGATATCACGTTGGAAGATCGATACTCATCGCAACACACAGTCAATCCAGACCTACAAGCGTTGGTGAACTCGCCGTTGCCCGATTCGCTGGCCGAATTCAGTACTTATGCCGCGCAATACACGGAAAGTCCTCATACATTACCGACCCAGTCGCCCTTGCCGTCGCCCTTGACGCGACACGACAGTCCGAGCTTCACGTATCCCACCCCACCAGCCAGCCAGGAAGGTTTGCTTACCGGAAGCCTGCCATTGCTGAGTCCTCAGGAGGATCCGGAGAATGTGAGACAAGTGTCTTCACCGCTCTCAGCGGCGTTTTACACCACCACCATGTCATCCGCCGCGGCTGTGGAGGAGGCGTTGAACGAGGTGTTGCCGGGCGAATCCGAGGCGGACACGGACCTTTACGGGTCCGGCTCGCCGAATCCGCACTCGCCACTGCCAAGCCCGTTGTCGGCGACACCGGCGCCGTCGCCGCTGTCCTCGCTGCCTCCATCCTCCGTCTCGTCGCCGGGACCGGTTGCCTTCACCGGCACAAGCTTTCCCGTGTCGCCGCATCACGCGCTCCAAAGCCAAATGATGCCGAACTCAGAGGATCCGCTGTTATCTTCGACTCCGAAGGACTTCACCGCCTCCGGTCGCAGACGATTCGAGTTCCAATCATATAAACTTATCACGAGCCAGAACCTCGTGGATTTTGGTCTCGGAAACGGCAGTCTGGCTGGCATCGTCGTTGACAACAACGGCGAGTTCAAATTGATACAAACGGCGGGTCTGCAGAAAGCGAATGTATTGGTGCAGACAGGTTCGCTCAGTCCAGCATTGACATTCAAGAAGGAGATTCGTTTGGCGACACCGAAAGTTGAGCCCGTTACCGTGAATCTCGGCTTGAACGTCCAGACGATGAATCAGCAACAGTGCAACTCGGGAGGACAATTTAATCAACAGCAAGTCATTAATCCGGCCAAGTTCCTCATTCAAACTAATCACGCTACAAAGAACAATATTTTGAGACACAAATTAGCTACTGGAAATTTACCGATACCCGTCGAACAAATCAAGGAGGAACTACTGGACGAAGATATATTTCTCAGTCCTGGCAGTTTACCCGCCGGTAGTCCCGTACGGTATTCTCGGAAGAGGCCGCGCATGGACGGCGGCCAATATGCCAACAGTTCGCATTCTTATCCATCGCGGCTGCGGAAGGCTTGCGATCGCCATTGGGATAGCAGCTATACGCCACCGCCGATCCTGGACCCATCTCGTCCTGGTCCAGGATTGTATGCAAGATTACATCAGCACGAAAGAGACTCGGACTTTAGTTCAGACGATTCCCAAGGAAACGATGGTCCGCCGCCAAGAATCAACATTGGCACGAGATATCAGGCCACGATACCACCGGTCGAGTGCAACGGGGATAGGGGGAAGAACGGATCGGAAACCGACCACCTTCTATGGGATCCCGGCATAAACAATGTGCTCACGAGTACTGAGCTGGAGATGTACTTGCAATTCGCGTGTTGCGCCGCGGTACCGGGCGGTGGTAGAAACAAGGAGTATGCGCTTCATCTGTTGCATATGTGCAAGGGAAATATTCatGAAGCGATGGTGAAATTAATGCGGCCAACACCTACGCTACCAGTGGAGCATCCGCTACTCAGCTACGAGTGCCACGAGTCCGATAGATGGACATCGCATGAAATGGACGCGTTCTATCAAGGATTGCTCAAGTACAACAAAGACTTTTCCGCGATTTCACGGGACGTTGGTGCCAAGACCGCGAAACAGTGCGTGCAGTTCTATTATCTCTGGAAGAGGCTCTGCCCCGATGAATACAAGAGGCTGCGTATTCGTCACGGAAAACCAAAGATCAAGATCGAAAAAGATTGCAAGGACAGTAGGGAACTCCGTGACGCCATTGCGTCCGTGACGGAAATGGACTTTGGTGAAGAAAAATCGATTCTTCATCGTACCCTAACAAACGAGAGGGAAAATTCGGCGACTCTAACTACCAGCGAAGGAGAATTGAGGTTATTCGCATACGACTGCCCAGATAGCTTTAGCGGAAGTGTAACAGTAACGATGGCCGGAAGCACCCAAACCGCCCAAATCGGCAATACCGGCCACGCCACAGTCAACACCAACTCACAAACTCACACTAGTTCTGAGCAACAACTACCCGCGCCCACCCCACTTCACTACCCCTGCAAGATTTGCGGGAAAGTTTTCAACAAAGTGAAAAGCAGAAGTGCGCACATGAAATCTCACAGACCAATACCCTTGCCCGATTCAACGGGTCAGGAATCTAAACGATCGACACAACAGTCATCGAAAGCGCAACAGCTGCAACAACCAATGCCATTGCAGCAAAAccaacagcagcagcaacaacagtCGGACAATGCTACACCGCAAATTCAAGATCATCAGCAGCAACTGCCCGCGAGTATCAGCGATAACAGCGCCCAAAATACAGCACACTTCTGCCGTAATCCAACGAGGCCCCCATAG
- Protein Sequence
- MANSESSRYDRLWFAAALATDHDRIKLNPPIVSATSPGANNDGLTKQLELIQQYMQQTQQQQQQTTTQQQQQQRTTTPSIAVATQLQKTQKPSIKSTASPGNISNNSGSGNATSNARSSPKPKVWSHSQQQQQQAQQQQQQQQQQVSSPGNGNVGKGSPSPGNSSSPGTVATSKSQTEPKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDAENKKSEKKEVIGPPLQTASVSVRALIEEKIIQKRTTADANSNQQPRTNATVFTTQADAVSHITGKTSFAVPAPPPLAAGEKVRRLSDGEHFRQPNVTVSGHATVQKQLQEAQTQAQAQALADLILKGAKVAVKRTTSDPGQRLHLTYQQPVQSATNQQSNNQQPQAQPAVTESFTMTGYAEDGGYFSPSLQDEVFQQVTTVPDSVLLHATQLDSIQFQTASLLQEQSTEQLQDITLEDRYSSQHTVNPDLQALVNSPLPDSLAEFSTYAAQYTESPHTLPTQSPLPSPLTRHDSPSFTYPTPPASQEGLLTGSLPLLSPQEDPENVRQVSSPLSAAFYTTTMSSAAAVEEALNEVLPGESEADTDLYGSGSPNPHSPLPSPLSATPAPSPLSSLPPSSVSSPGPVAFTGTSFPVSPHHALQSQMMPNSEDPLLSSTPKDFTASGRRRFEFQSYKLITSQNLVDFGLGNGSLAGIVVDNNGEFKLIQTAGLQKANVLVQTGSLSPALTFKKEIRLATPKVEPVTVNLGLNVQTMNQQQCNSGGQFNQQQVINPAKFLIQTNHATKNNILRHKLATGNLPIPVEQIKEELLDEDIFLSPGSLPAGSPVRYSRKRPRMDGGQYANSSHSYPSRLRKACDRHWDSSYTPPPILDPSRPGPGLYARLHQHERDSDFSSDDSQGNDGPPPRINIGTRYQATIPPVECNGDRGKNGSETDHLLWDPGINNVLTSTELEMYLQFACCAAVPGGGRNKEYALHLLHMCKGNIHEAMVKLMRPTPTLPVEHPLLSYECHESDRWTSHEMDAFYQGLLKYNKDFSAISRDVGAKTAKQCVQFYYLWKRLCPDEYKRLRIRHGKPKIKIEKDCKDSRELRDAIASVTEMDFGEEKSILHRTLTNERENSATLTTSEGELRLFAYDCPDSFSGSVTVTMAGSTQTAQIGNTGHATVNTNSQTHTSSEQQLPAPTPLHYPCKICGKVFNKVKSRSAHMKSHRPIPLPDSTGQESKRSTQQSSKAQQLQQPMPLQQNQQQQQQQSDNATPQIQDHQQQLPASISDNSAQNTAHFCRNPTRPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01068231;
- 90% Identity
- iTF_01355686;
- 80% Identity
- iTF_00731098;