Basic Information

Insect: Formica selysi
Gene Symbol: lov
Assembly: GCA_009859135.1
Location: CM020807.1:8395362-8399304[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 5.2e-15 1.4e-11 44.7 0.0 2 44 534 576 533 577 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	5.2e-15	1.4e-11	44.7	0.0	2	44	534	576	533	577	0.94

Sequence Information

Coding Sequence: ATGTCGAGCGTCGGGAACAGTCCCGACAGGATGGGTGTTCAATCACTCTATTCTTTGCGGTGGAACAACCATCAAGCCCACATACAACAGTTCTTCCAAGAGCTGCTACATGAGGAGAATCTGGTCGACGTGACCCTGATCTGCGCCGAGACCAGCGTCAAGGCACACAAGGTCGTCCTCAGCGCCTGCAGTCCTTTCTTCCAAAGGATATTCGCGGAGAATCCATGCAAACATCCCGTGATCGTTCTGAAGGATTTCTCGAATCATGAATTGTCCACGCTGATCGACTTTATGTATGGCGGCGAGGTGAAGATTGCTCAGGAGGAATTACCAGGTTTAATGAGAGCCGCGGAATGCCTGCAAGTGCGCGGTTTATCGTCGTCGGAACCTAGGCTGGTGTCGGAAGAACCCAGGCCGTCATCATCCTCGTCGACTCTTCTGGAGTTTACCACGCCGGACGACGCGCGACACGGCACTCCGGAAGAGGATGACAACGCGTTGGAGAACACAAAGGAGATAAAGCCGACGCTGTTTCAACAAACGAGGGACCATCCAACCAAACCGCTCATTGGTCATATGAACTTTGGCATCCGTGAGAGCTGTGGCTCGCCGCTAATGCCGCGTCGAAAGCAGGCGCGTCCGCGCCGACGTTCCGGCGAATTGCTGCCGCAGGATTTGAGCAGACGCCCGACTCCGCCGGCCAGTTTGAGTCCATTGCCGAGTGTTCTTAATCTCAGCGGTAACCAGCACCAGgcacagcagcagcaacagcagctgCAACTACAACAACCTCAGTATTCTCAACAAATGATCaacagaaataatcaacaacaAATGATCAACGCTCAACAGAATCCACAACATCAGCAGCAGCAGGAAGATATGGCGGAGAATCTTTCGATGAAGAAATCTATGTCGCCGAGCGGACTGGAACAGCATCGTGTGAAGACAGAGGGCAGCGAAGCGACGAGTAGTCCGCGCGGTTCGCCGCTTACGGGAACGAGTCTGATGCATCCGGACGGCTCCATACAAGACATACCGGCGGCGGCCGTAGCGGCGGCGGTCGCCACCGTGATACCGTCGATGTCTCTGACGCAAACGCAGCCCTCCGAGTACCTGACAAGCCTCGGCCATCTGGCGAGCCAATGGCTACCCGGGCAGACTTCATTGCCGCCGCCTCCACCGCAGGGCCATCATCCACGCGAAGACAGTCCACACGGGTCCGGTAGGCCCCATCATGCGTatcagcagcaacagcagcaggaGCCGTCGATAGTACCGCGACGCAATTCCTTGTCGATGTTTACACCATTGGATGGCGTGACTCTCGGCGGCGGACTTTTTCCTCACACCGGGTATGATAGGACAGTTCTCGGATCAGACTCGTTTCTCGCGGATAGTTTCAATCACGAGACGTTGCAGAACATCTTTAGTGCCCCAAATCTTGGTCCTCCTCCCAAGAAAACGAAAAAACATCGGAGCGATAGCGATGGAACATCACAACGTAGATGGAGTGATCACAACAGCCGCACGATGGCGGTAAACAGGCCGAAGGGGCAACATAGTGCGCCGCGAGGAGGACCGCCGAGATCGTGGACGAATAGCGAACTTACATTAGCTCTGACGCATGTCTGGGAAAAGAAGCTCACCACGTCGCAAGCTAGTCGCATGTTTGGCATTCCTTATAATAGCTTGCTGATGTACGTGCGCGGTAAATATGGGAAGAGTCTCAAGCTGGAGCAACTGCGTAGAAATTGTACCGGCACCAACACTCCCGAGATTATGAACAACAATAACATCAAGCCCGTCCAGCAGTCACCGCAGATGAGCCACGCGCTCGCCAGTCTATCGTTGCAGCATCCAGGTGACAATAGCGGCTTCGCTTCCCATCGCTCCTTGATTAGCGGCAACATGACGCAGCCGCAAGGTTTCTACGCCCCCGACTATGCTGCCGCGCCCTATCCTCTGGCGGTGAATATGATGCATATGTTACCTCCAAGCGAGCAGAAAACCTTCGAATCGTCCGTGAATTCAAGCGGCGACGGAATTGGATGTCCAGGCGGTGGTGGAGATGGCAACGGTGACGGTGATCTGACGAACTCGCAGACCAGCGAAACACCGTCGCCTATAGTcgatcatcatcatcatcatcaggagtcgtcgtcgtcgtcgtcgtcgatgcAACCGCAACCGACACAATCGGCGCCTGCGTTGCTACAACAGAACGGTTCGGATTAG
Protein Sequence: MSSVGNSPDRMGVQSLYSLRWNNHQAHIQQFFQELLHEENLVDVTLICAETSVKAHKVVLSACSPFFQRIFAENPCKHPVIVLKDFSNHELSTLIDFMYGGEVKIAQEELPGLMRAAECLQVRGLSSSEPRLVSEEPRPSSSSSTLLEFTTPDDARHGTPEEDDNALENTKEIKPTLFQQTRDHPTKPLIGHMNFGIRESCGSPLMPRRKQARPRRRSGELLPQDLSRRPTPPASLSPLPSVLNLSGNQHQAQQQQQQLQLQQPQYSQQMINRNNQQQMINAQQNPQHQQQQEDMAENLSMKKSMSPSGLEQHRVKTEGSEATSSPRGSPLTGTSLMHPDGSIQDIPAAAVAAAVATVIPSMSLTQTQPSEYLTSLGHLASQWLPGQTSLPPPPPQGHHPREDSPHGSGRPHHAYQQQQQQEPSIVPRRNSLSMFTPLDGVTLGGGLFPHTGYDRTVLGSDSFLADSFNHETLQNIFSAPNLGPPPKKTKKHRSDSDGTSQRRWSDHNSRTMAVNRPKGQHSAPRGGPPRSWTNSELTLALTHVWEKKLTTSQASRMFGIPYNSLLMYVRGKYGKSLKLEQLRRNCTGTNTPEIMNNNNIKPVQQSPQMSHALASLSLQHPGDNSGFASHRSLISGNMTQPQGFYAPDYAAAPYPLAVNMMHMLPPSEQKTFESSVNSSGDGIGCPGGGGDGNGDGDLTNSQTSETPSPIVDHHHHHQESSSSSSSMQPQPTQSAPALLQQNGSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00868979;
90% Identity: iTF_01245332;
80% Identity: iTF_00730884;