Fsel021951.1
Basic Information
- Insect
- Formica selysi
- Gene Symbol
- lz
- Assembly
- GCA_009859135.1
- Location
- CM020811.1:7879063-7888434[+]
Transcription Factor Domain
- TF Family
- Runt
- Domain
- Runt domain
- PFAM
- PF00853
- TF Group
- Beta-Scaffold Factors
- Description
- The AML1 gene is rearranged by the t(8;21) translocation in acute myeloid leukemia [1]. The gene is highly similar to the Drosophila melanogaster segmentation gene runt and to the mouse transcription factor PEBP2 alpha subunit gene [1]. The region of shared similarity, known as the Runt domain, is responsible for DNA-binding and protein-protein interaction.In addition to the highly-conserved Runt domain, the AML-1 gene product carries a putative ATP-binding site (GRSGRGKS), and has a C-terminal region rich in proline and serine residues. The protein (known as acute myeloid leukemia 1 protein, oncogene AML-1, core-binding factor (CBF), alpha-B subunit, etc.) binds to the core site, 5'-pygpyggt-3', of a number of enhancers and promoters.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-70 1.4e-66 222.7 0.0 4 129 94 220 91 220 0.98
Sequence Information
- Coding Sequence
- ATGACGAATCCTTCGCGAGATACTCGACCCGAGGATCGGCCTGCCGGCCTAGATTATCCTCCTGATCCTAGGTCAGTGCGTGGTGGTCATCAGCCCCATCAAGCGAATCCGGTGAGCCAGATCGGCGGACCGAGAATACGGAGGACTCGGGCTTCATCCTCGAGGAGAAGGATGCACCTGGCTAACGACGAGGTCCCTCCTCAAGGTTCAACCGGCGGAAATCACCTCTCCGATTATGCCCTCACCGCCGATTTGCTCGCCGAGAGAACGCTGGATGGGCTTCTCGCCGAGCATCCTGGAGAACTCATTCGCACAGgTAGCCCACATGTGGTTTGCACGGTATTGCCGTCACATTGGAGGTCGAACAAGACCCTGCCGGTAGCATTTAAGGTAGTAGCTCTCGGCGAAGTCGGAGACGGTACCCTCGTGACCGTTCGAGCCGGGAACGATGAAAATTGTTGCGCGGAATTGCGGAATTCTACCGCCCTAATGAAAAATCAAGTCGCCAAATTCAACGATCTCAGGTTCGTCGGTAGAAGTGGTAGAGGTAAGGAAAGCTTCACCCTGACGATCATGCTGCAGACATCGCCGCCGCAGGTGGCCACGTTGTCGAAGGCGATCAAGGTGACTGTGGACGGTCCCAGGGAGCCGCGTTCGAAGACACGACACCAGGCCTTTCATCCCTTTCACTTCGGGCCTCGTCCGTTCCCCTTCGGACACCCGCAGGACCCGTTGGGATTTAAGCTGTCGGGTAAGTCTCTAATCAAAGACACGCGGCCTCCTTCGTCGCGACGGGTTCGCGCGAATACCTGCTTCCGGTGA
- Protein Sequence
- MTNPSRDTRPEDRPAGLDYPPDPRSVRGGHQPHQANPVSQIGGPRIRRTRASSSRRRMHLANDEVPPQGSTGGNHLSDYALTADLLAERTLDGLLAEHPGELIRTGSPHVVCTVLPSHWRSNKTLPVAFKVVALGEVGDGTLVTVRAGNDENCCAELRNSTALMKNQVAKFNDLRFVGRSGRGKESFTLTIMLQTSPPQVATLSKAIKVTVDGPREPRSKTRHQAFHPFHFGPRPFPFGHPQDPLGFKLSGKSLIKDTRPPSSRRVRANTCFR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01268793;
- 90% Identity
- iTF_00729070; iTF_00867921; iTF_00126477; iTF_00125688; iTF_00127960; iTF_00129504; iTF_01407942; iTF_01405465; iTF_00385056; iTF_01408832; iTF_01268048; iTF_00228450; iTF_00229137; iTF_01267327; iTF_01268793;
- 80% Identity
- -