Basic Information

Insect: Formica exsecta
Gene Symbol: Mtf1
Assembly: GCA_003651465.1
Location: NW:446653-455072[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 2.6e-05 0.0017 18.0 1.1 1 23 130 154 130 154 0.97

2 6 0.0002 0.013 15.2 0.2 1 23 160 184 160 184 0.95

3 6 0.00017 0.012 15.4 2.2 1 23 190 214 190 214 0.97

4 6 3.3e-06 0.00022 20.8 1.0 1 23 219 243 219 243 0.96

5 6 5.9e-05 0.0039 16.9 5.3 1 23 249 273 249 273 0.98

6 6 5.1e-05 0.0034 17.1 3.7 1 23 279 303 279 303 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	2.6e-05	0.0017	18.0	1.1	1	23	130	154	130	154	0.97
2	6	0.0002	0.013	15.2	0.2	1	23	160	184	160	184	0.95
3	6	0.00017	0.012	15.4	2.2	1	23	190	214	190	214	0.97
4	6	3.3e-06	0.00022	20.8	1.0	1	23	219	243	219	243	0.96
5	6	5.9e-05	0.0039	16.9	5.3	1	23	249	273	249	273	0.98
6	6	5.1e-05	0.0034	17.1	3.7	1	23	279	303	279	303	0.97

Sequence Information

Coding Sequence: ATGGCGACGTGGGAGAGCGACAAGTTTCAAGAGGACGAGGATGCCGACAGTATCGGGGACAATTTCGACAATATCCTCGTGACGCACGATCTGCAAGATTGCCTGGACGACACTTTAGACCTGTCGAGCTTCGAGAAGGTCTACGAGCAGAGTGCGGTGTTCGATTACGAGAGGTACTCCGACGACGATGCTGCTATCAATGAGAGGCCGATACCCGCCGATGACAACACGACCGGgcacATTCAACATACAATCAATCCAGATGAAATTTATATGCGAATTCATCAAGAGCAAGACGATGTATTATTTGAAGATTGTACAACTTCTCATGAAACTGCTACTATTGAAACTGCAGATCCAGATAGTAATCAAAAACACATCAATCGCTATAATTGCCAATACGAAGGTTGCACCAGAACATATAGTACCATTGGAAATTTGCGTACTCACATGAAGACACATAAAGgcgagtatcgatttaaatGCGCAGAGCCGAGTTGCGGCAAGGCCTTTCTCACGTCCTACAGTCTAAAGATCCACATTAGGGTACACACAAAAGTAAAACCGTTCGAATGCAATCACAAAGGCTGCGAGAAAGCATTCAATACCCTTTACAGACTGAGAGCTCACCAAAGACTTCATAGTGGCAACACATTCAACTGCGAAGAGACTGGATGTGTTAAATTCTTCACTACTTTAAGCGATCTCAAGAAACATATACGTACTCATACTCAAGAAAGACCATACAAgTGCAGAGAGAAGGGTTGTGGAAAGGCTTTTACAGCTTCGCATCATTTAAAAACGCACAAGAGGACACATACAGGCGAACGACCATATATTTGTACCTTCGAAAATTGTAGACGACGATTTACTACTCCTCACAGTTTAAAGAGCCACATAAAAACGCATAATAAAACTGTGAATAATGAAATGAAGCGTAAAGACAACAGAAATGATGATGTGACTAAGGAACAGAAAAAGTTGACTCAATTAGATTTGAAACTTGTGAAAGTTAGTACGAGCGATACCATTATACCATCATATGCTGTCATACCAATATCTTCAGATCTCGCACAAAATCATGAAAACATGTCATATGTTTCTGCGGAAAATGGTACAACAGGACAAGTAGTTCCCACTAATTTAACGATGGACATTATGAATCATCGCAAGTTGGATGTAAGACTTGATTATATTTCTACCAAAGATGTGGAAGACTCGAATAATAGAACCACCGAAGTTGCACTTCTCGCAACGGATATCGtgttagataattttaatgaacacACGGTTGACGCTTTTAACAATAATGAGAACTATAATGAATTTAAAGTATTCAATCAAATGACCGAATCGAATATGCAACATGATAATTTAACGGATATAGTTGGGCATCATCCGCACAAGTCAGCTTCGTTATCAGAAGTGCGtagtgataaaataaataggcAGGATCGATCTATCCCGATAAACTTAGGACAAAAGATTATGCAAGACGGTTTGCAAAACGCAATAACGCATATTTCGGAAGGAACAGATTTTACAAGTGATATAAAACAGTACAAAAACGAATCCGCCACTGTTTCTGACAATGTATTTGCAAACCGATCGAATGCAGAAAATATAGCCGACAATGATAACAACGCGTTATATAGTGCCAATTGTATTACTAGTCATATTCCTGATATTATAAGTTCCTCGAATGAAACCCACCTTTTCGAGAATGGAATGGACGCTCTTTCGTTCATCAATGATGCGACTTTACAAAGCGAAGACTCTCTCAACGCGGTTTCAAATCATGATCTGTGCACAGACTCTGTCATTACGAACGCGCAATCGGAAGCCGTTGAACTCGCAATAGCCACTGAGGAGGAATTACCTTCACCTTGGATAGATGTTATGGCACTGGCAACCGCACCCGCATTGAGAGCACAGTCTTGGTCCGAGTTAAATGCTTTTCCCATAGCAGTTCATTCCTTGGTCGATTTAGTAGGTCCGGAGCCTTATCCACTAGAGATAGATTCTCAATTGCCATCTATggaaaatttgagaaatattaatacagtGAATACGGAACATACTTTAGCAAATACTGAGATTGTGCAGTGTCAAAAAGATATCGATTATGAGCATAAAAACATAAGTAATATTAAGAACAAGAGAGATAATAGGAATATTCTGCAGGAGATTACAGCAGATGctgatatatgtaaatgtgtCGATTGCAAGTGCGATAACTTACAAAATTGTCAGAACTGCACAAATAGCCCCGTCATGGAAGTTACGAAAAAAGATTCGATAAAAATCGTAGATGACTTCGTGTCTTCCTTGCAAAGTGGATGTTCCTGCAACGCCGAGTCCGGTGGTTGTGATTCTTGCTGTGTTGTAATTTGTCTAAAAACACTGCAACAACTACAGAAAGTATTTAGCAATTGCTGTAAGAATACTAACAATACCACAAATATGTGTTGTAGAGAAAAATTGCTACCATCCTTAATGAAGTATCAACTAGCCAGAAATCCataa
Protein Sequence: MATWESDKFQEDEDADSIGDNFDNILVTHDLQDCLDDTLDLSSFEKVYEQSAVFDYERYSDDDAAINERPIPADDNTTGHIQHTINPDEIYMRIHQEQDDVLFEDCTTSHETATIETADPDSNQKHINRYNCQYEGCTRTYSTIGNLRTHMKTHKGEYRFKCAEPSCGKAFLTSYSLKIHIRVHTKVKPFECNHKGCEKAFNTLYRLRAHQRLHSGNTFNCEETGCVKFFTTLSDLKKHIRTHTQERPYKCREKGCGKAFTASHHLKTHKRTHTGERPYICTFENCRRRFTTPHSLKSHIKTHNKTVNNEMKRKDNRNDDVTKEQKKLTQLDLKLVKVSTSDTIIPSYAVIPISSDLAQNHENMSYVSAENGTTGQVVPTNLTMDIMNHRKLDVRLDYISTKDVEDSNNRTTEVALLATDIVLDNFNEHTVDAFNNNENYNEFKVFNQMTESNMQHDNLTDIVGHHPHKSASLSEVRSDKINRQDRSIPINLGQKIMQDGLQNAITHISEGTDFTSDIKQYKNESATVSDNVFANRSNAENIADNDNNALYSANCITSHIPDIISSSNETHLFENGMDALSFINDATLQSEDSLNAVSNHDLCTDSVITNAQSEAVELAIATEEELPSPWIDVMALATAPALRAQSWSELNAFPIAVHSLVDLVGPEPYPLEIDSQLPSMENLRNINTVNTEHTLANTEIVQCQKDIDYEHKNISNIKNKRDNRNILQEITADADICKCVDCKCDNLQNCQNCTNSPVMEVTKKDSIKIVDDFVSSLQSGCSCNAESGGCDSCCVVICLKTLQQLQKVFSNCCKNTNNTTNMCCREKLLPSLMKYQLARNP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00128514;
90% Identity: iTF_01245458;
80% Identity: -