Basic Information

Insect: Formica exsecta
Gene Symbol: ZBTB41
Assembly: GCA_003651465.1
Location: NW:105462-109190[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.076 5.1 7.1 0.1 2 23 140 162 139 162 0.93

2 15 0.00082 0.055 13.3 0.4 2 23 167 189 166 189 0.94

3 15 1.4 97 3.1 0.2 3 23 314 334 313 334 0.94

4 15 4.9 3.3e+02 1.4 3.1 2 23 340 362 339 362 0.93

5 15 0.00023 0.015 15.1 1.6 1 19 372 390 372 392 0.96

6 15 0.00018 0.012 15.4 5.4 2 23 402 423 401 423 0.97

7 15 0.00011 0.0075 16.0 0.2 1 23 436 458 436 458 0.98

8 15 4.1e-07 2.8e-05 23.7 1.4 1 23 466 488 466 488 0.98

9 15 0.011 0.74 9.8 6.3 1 23 494 516 494 516 0.98

10 15 8.6e-06 0.00058 19.5 2.7 1 23 519 542 519 542 0.96

11 15 0.00023 0.015 15.0 0.9 1 23 561 583 561 583 0.98

12 15 9.4e-05 0.0064 16.3 3.4 1 23 589 611 589 611 0.98

13 15 2.7e-07 1.8e-05 24.2 6.6 1 23 616 638 616 638 0.98

14 15 2e-06 0.00013 21.5 3.4 1 23 646 668 646 668 0.99

15 15 5.5e-06 0.00037 20.1 1.9 1 23 674 696 674 696 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.076	5.1	7.1	0.1	2	23	140	162	139	162	0.93
2	15	0.00082	0.055	13.3	0.4	2	23	167	189	166	189	0.94
3	15	1.4	97	3.1	0.2	3	23	314	334	313	334	0.94
4	15	4.9	3.3e+02	1.4	3.1	2	23	340	362	339	362	0.93
5	15	0.00023	0.015	15.1	1.6	1	19	372	390	372	392	0.96
6	15	0.00018	0.012	15.4	5.4	2	23	402	423	401	423	0.97
7	15	0.00011	0.0075	16.0	0.2	1	23	436	458	436	458	0.98
8	15	4.1e-07	2.8e-05	23.7	1.4	1	23	466	488	466	488	0.98
9	15	0.011	0.74	9.8	6.3	1	23	494	516	494	516	0.98
10	15	8.6e-06	0.00058	19.5	2.7	1	23	519	542	519	542	0.96
11	15	0.00023	0.015	15.0	0.9	1	23	561	583	561	583	0.98
12	15	9.4e-05	0.0064	16.3	3.4	1	23	589	611	589	611	0.98
13	15	2.7e-07	1.8e-05	24.2	6.6	1	23	616	638	616	638	0.98
14	15	2e-06	0.00013	21.5	3.4	1	23	646	668	646	668	0.99
15	15	5.5e-06	0.00037	20.1	1.9	1	23	674	696	674	696	0.98

Sequence Information

Coding Sequence: ATGGAGACAaaagtaaaatcttttaataaaattgaagatgagaaaatacatacatataaaatatgtcgtTTGTGTGGAGAAAAATCAGTGTGCTATGTCccaatttttgaagaaaacaaTTACTGTATTCCAGAAAAAATAAGCAGATGTTTACCAATTATTATTTCTCCAACAGACAATTTGCCTTCCAATATATGTAGACGTTGCCTATGTCACTTAAACACTAGTTATAGACTAATTCTTACTTCGATGGAAATAGATGATCGTCTACGAACGCAATTAGAccaaaaacagaaaaatatcttcaaaGATCAATATGATGTAATGTCTTGCGAGGAATCTGAAATATCTAAATCAACAAATGCTAAACTACTGTTATTAAGAGAACTAAAGAAACGAGCTATTGCTGGCCCAACTGAATGTGATCTATGTGACTTAAATTTTCAAGATGTAGATGCATTTGATACTCATATGGAACAAtcccattttttaaaatggagATGTAATCTTTGTGATAGTAGCTTTTATCAATCTAACGAGTTGATAGCACACAAAATGTTAAGGCACAGTggtaatattgtaatttgtagTAGCTGTGAACATGTTAATGATCAGGAAGATAAATGGAAGATTACAAATGAGAGGAATATCCATAATCAGGATAAGCAACAAAAGATTGATAAGAACAATGATTCCAAGGAGGCAGTTGCAACTTTTACAGTAAATGAAGAAATAGCAACATCATTAATTAACATAGCAGTACAAACTGATGatgatattattgaaatagaaaCTGAGAGCAGTCCAGTACAAATAGACTCGGCAGAACAAAGTGATACTAATTCTGATTCAGACAcagatagaataataaaaaattgcaacatACTTTTGAAGAAACTTAAAATGTTCAACAagcataaagaaaaagaacgtTCATTTTGCGATATTTGCAAGATCTATTTCGGGGAGGATCGATACTTTGAAGcccataataaaatacatgagGAAAAATCTGTGACTTGCACCATTTGTTGTACAGAATGTTCGTccatatatgaattatttcttCATAAACGTGCAATGCatgatatgtataaaaaaatgcaattaagatatgtttgcaataaatgcaataaattctTCACAAACAGTTGGCATTGGGAGAATCACAATGAAAATAACTGTTCCAAAATGGCTAATAAGTATTGCAAATATTGCAATACAACATTTGCTACGCATCTCAAATTGACGCGTCACTTGAGGAAACATAAATGGGAGATGATCAATGATCCAACTGtgactatatataaatgtgttgcTTGtcctaaaatatttgttgacaAAGAATTATATGAGAAACATagaaatGTGCATGATCCTGAATGCTgggataaatttaaatgtaccaTATGTGACCGACCATTCAGTGACAAGTCTCGATTACGAAAGCATTTAACTATTCATGAAAACAACAAACTTCATCAATGTGATATTTGCGGCCGTCGTTTCCTGCACTTACACAATATGaCAATGCATCGTAAAATTCATTTTGGGCATAAATGCAGTTATTGTGAcacagtttttaaaaaaagacaggatctaataaaacatatacaagAGTCTCATGGTTTGGAGCCAGATGTACAGAAACTATCTAGTAAACTGTACATGAgcaagatttatatttgcagattCTGTGGCAAGAAGCTCAGCACGTATCAATCGTTAATTAATCATGAGAGAATTCATACGGGAGAAATGCCATTTAGTTGTCCCATATGCCACCGGTCTTTTCGGAGTTATACTTCTAGATGGACTCATATACAACGGCATCAAAAGGGGAACTTCATGTGTGAACATTGTGGTAAATGTTTTagttacaaacaaaatttgacCATGCATATGCAGACACATTTGCCAATGGAGGCTCGTAAATATCAGTGTAATATATGTGAGAAAAAGTTTATGAGAAACAGTCATCTGTCTATTCACAAACGTATCCATGAGGGTATACGGCCTTTCAAATGCGACGTGTGCTCATTAAGTTTCACACAAAAGGGCGATATGAAACGGCATCGTATGCGGCACTTcaaacaagatataaaatcgaacaatttgcaatctaaaagagagaaaggacaagcttaa
Protein Sequence: METKVKSFNKIEDEKIHTYKICRLCGEKSVCYVPIFEENNYCIPEKISRCLPIIISPTDNLPSNICRRCLCHLNTSYRLILTSMEIDDRLRTQLDQKQKNIFKDQYDVMSCEESEISKSTNAKLLLLRELKKRAIAGPTECDLCDLNFQDVDAFDTHMEQSHFLKWRCNLCDSSFYQSNELIAHKMLRHSGNIVICSSCEHVNDQEDKWKITNERNIHNQDKQQKIDKNNDSKEAVATFTVNEEIATSLINIAVQTDDDIIEIETESSPVQIDSAEQSDTNSDSDTDRIIKNCNILLKKLKMFNKHKEKERSFCDICKIYFGEDRYFEAHNKIHEEKSVTCTICCTECSSIYELFLHKRAMHDMYKKMQLRYVCNKCNKFFTNSWHWENHNENNCSKMANKYCKYCNTTFATHLKLTRHLRKHKWEMINDPTVTIYKCVACPKIFVDKELYEKHRNVHDPECWDKFKCTICDRPFSDKSRLRKHLTIHENNKLHQCDICGRRFLHLHNMTMHRKIHFGHKCSYCDTVFKKRQDLIKHIQESHGLEPDVQKLSSKLYMSKIYICRFCGKKLSTYQSLINHERIHTGEMPFSCPICHRSFRSYTSRWTHIQRHQKGNFMCEHCGKCFSYKQNLTMHMQTHLPMEARKYQCNICEKKFMRNSHLSIHKRIHEGIRPFKCDVCSLSFTQKGDMKRHRMRHFKQDIKSNNLQSKREKGQA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00730949;
90% Identity: iTF_00730949;
80% Identity: -