Fase025983.1
Basic Information
- Insect
- Formica aserva
- Gene Symbol
- pnr
- Assembly
- GCA_037039905.1
- Location
- JAXRKO010000025.1:3153064-3158815[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3 1.2e+04 -2.5 0.1 3 12 232 246 231 248 0.58 2 2 1.2e-16 6e-13 49.6 5.1 1 35 423 456 423 457 0.98
Sequence Information
- Coding Sequence
- ATGTTCGATGTACCACAGAAGTTCTATGAGCTGTGTCGCCTTTGTTTATCCCCGGACGGTGTCAAATGTTCCATATTCGAGGAGGAGGGCATTCAGCGAAGTTTCGCCGAAAAGATATTAGCGTGCTTGTCAATCACGgTAAAAGATGGCGATACCTTACCGTCAATTATTTGCCATCgatgtgtatataaattggACGTACTGCACAACTTCCGAGAAGTGTCGCAAAAGTCTGACATTATACTTAAACAGTACCTGGATTATGCCAAGCAATTGTCATCTTCTGATGAGCAGAAAGAGACTCTCTCCACTGCCAAAATAGTAGGCGAAAGCCCTCTACAATCGTTCCTCGAGTTAAATAGGACATTATTTAATGAGGAGTCTAACTCTGAGCCAGCCAGCATTAATCAAAACATAATACCTCAAACTCTAACGCATCATCTACAGTTGCAAAACAGTGATATGCCAGaacatgaaaatattaagtgCGAACCAGAGGATGACACATGCTCTAACAGCTCTGATCCTGAACGACTAGAAATTGAGGATCGTGACGAGCAGGAAATTGAAAGCGAAGAAAATGGTTATGACATGACTGTTAACAAGAGAATTAAAATTGAGGACAATTATGATGGCTCCGAATCCAACACAGCAAATTGTAGTCCAGTTAATAGAATGGATACCCCAGAGAGCAACTGTTCCGATAGTAACATTGACCATGAAACGACAAAGCTGTGGCAAGCTTTAGCTAGTAATAGAAGTTTGGAAATCACACGAACAAATGGTGATAAGTTAAATAATGGATTTACCGGCGAAGCCACAAATCTGCTACGTTCTTTGATTAACAATAGGCAGATTGGTATTACCGCTATTGATTCAGAAAAAATATCTCCGCAAATCAAATTCTATAGGGATACGCAGGGTACAACTATAGAAAATACGCTAACCGATTTTCCTGTGCTTGGTAATCGTACGAATATAGCAACTTTAGAAAATAAGAGTGCCTCAATAGATAGTAACCCATCTAGCCCTGCCAGTATCGGTCGTAAGGAAATGACGATAGCGACGAAAGGTCGTAGAAAGCAAAGCTATCCCAGTAAGGCTCCAGCGAGTCCGGACATTGTCGCCAATTACCAACATGAACCCAACAATGAAGAGCAGGCTCATGATTTTACTACATGGTCGAACAAGATAAAAGGAAAGATGGACGATCAAAAACAATTCGATCAGCAAAGTGGCAACATTGCAAAGAAGGTCGACATGTCTTGCACAAATTGTGGCACTATGACAACAACCATCTGGAGAAGGAATATGAAGGGCGAGATGGTGTGCAATGCTTGCGGGCTGTATTACAAACTACATGGTGTTAATCGCCCGGTTACTATGCGAAGAGATACTATACATACGCGCAGACGTAGACCCAAAGGCGAGAAACCAACGAGACACAGGAGTAAGAGACTTAATgatctattcttttttttttatttttatctccaGGGGGAATCTTTTAATGATGAAGATAGTAACAGGCAATACTCTATTTATTGA
- Protein Sequence
- MFDVPQKFYELCRLCLSPDGVKCSIFEEEGIQRSFAEKILACLSITVKDGDTLPSIICHRCVYKLDVLHNFREVSQKSDIILKQYLDYAKQLSSSDEQKETLSTAKIVGESPLQSFLELNRTLFNEESNSEPASINQNIIPQTLTHHLQLQNSDMPEHENIKCEPEDDTCSNSSDPERLEIEDRDEQEIESEENGYDMTVNKRIKIEDNYDGSESNTANCSPVNRMDTPESNCSDSNIDHETTKLWQALASNRSLEITRTNGDKLNNGFTGEATNLLRSLINNRQIGITAIDSEKISPQIKFYRDTQGTTIENTLTDFPVLGNRTNIATLENKSASIDSNPSSPASIGRKEMTIATKGRRKQSYPSKAPASPDIVANYQHEPNNEEQAHDFTTWSNKIKGKMDDQKQFDQQSGNIAKKVDMSCTNCGTMTTTIWRRNMKGEMVCNACGLYYKLHGVNRPVTMRRDTIHTRRRRPKGEKPTRHRSKRLNDLFFFFYFYLQGESFNDEDSNRQYSIY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00126375;
- 90% Identity
- iTF_00869291;
- 80% Identity
- -