Fase036294.1
Basic Information
- Insect
- Formica aserva
- Gene Symbol
- lov
- Assembly
- GCA_037039905.1
- Location
- JAXRKO010000071.1:88254-92203[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.8e-15 2.2e-11 44.7 0.0 2 44 534 576 533 577 0.94
Sequence Information
- Coding Sequence
- ATGTCGAGCGTCGGGAACAGTCCCGACAGGATGGGTGTTCAATCACTCTATTCTTTGCGGTGGAACAACCATCAAGCCCACATACAACAGTTCTTCCAAGAGCTGCTACATGAGGAGAATCTGGTCGACGTGACCCTGATCTGCGCCGAGACCAGCGTCAAGGCACACAAGGTCGTCCTCAGCGCCTGCAGTCCTTTCTTCCAAAGGATATTCGCGGAGAATCCATGCAAACATCCCGTGATCGTTCTGAAGGATTTCTCGAATCATGAATTGTCCACGCTGATCGACTTTATGTATGGCGGCGAGGTGAAGATTGCTCAGGAGGAATTACCAGGTTTAATGAGAGCCGCGGAATGCCTGCAAGTGCGCGGTCTATCGTCGTCGGAACCTAGGCTGGTGTCGGAAGAACCCAGGCCGTCATCATCCTCGTCGACTCTTCTGGAGTTTACCACGCCGGACGACGCGCGACACGGCACTCCGGAAGAGGATGACAACGCGTTGGAGAACACAAAGGAGATAAAGCCGACGCTGTTTCAACAAACGAGGGACCATCCAACCAAACCGCTCATTGGTCATATGAACTTTGGCATCCGTGAGAGCTGTGGCTCGCCGCTAATGCCGCGTCGAAAGCAGGCGCGTCCGCGCCGACGTTCCGGCGAACTGCTGCCGCAGGATTTGAGCAGACGCCCGACTCCGCCGGCCAGTTTGAGTCCATTGCCGAGTGTTCTTAATCTCAGCGGTAACCAGCATCAGgcacagcagcagcaacagcagctgCAACTACAACAACCTCAGTATTCTCAACAAATGATCaacagaaataatcaacaacAAATGATCAACGCTCAACAGAATCCACAACATCAGCAGCAGCAAGAAGATATGGCGGAGAATCTTTCGATGAAGAAGTCTATGTCGCCGAGCGGACTGGAACAGCATCGTGTGAAGACAGAGGGCAGCGAAGCGACGAGTAGTCCGCGCGGTTCGCCGCTTACGGGAACGAGTCTGATGCATCCGGACGGCTCCATACAAGACATACCGGCGGCGGCCGTAGCGGCGGCGGTCGCCACCGTGATACCGTCGATGTCTCTGACGCAAACGCAGCCCTCCGAGTACCTGACAAGCCTCGGCCATTTGGCGAGCCAATGGCTACCCGGGCAGACTTCATTGCCGCCGCCTCCACCGCAGGGCCATCATCCACGCGAAGACAGTCCACACGGGTCCGGTAGGCCCCATCATGCGTATcagcagcaacaacagcaGGAGCCGTCGATAGTACCGCGACGCAATTCCTTGTCGATGTTTACACCATTGGATGGCGTGACTCTCGGCGGCGGACTTTTTCCTCACACCGGGTATGATAGGACAGTTCTCGCATCAGACTCGTTTCTCGCGGATAGTTTCAATCACGAGACGTTGCAGAACATCTTTAGTGCCCCAAATCTTGGTCCTCCTCCCAAGAAAACGAAAAAACATCGGAGCGATAGCGATGGAACATCGCAACGTAGATGGAGTGATCACAACAGCCGCACGATGGCGGTAAACAGGCCGAAGGGGCAACATAGTGCGCCGCGAGGAGGACCGCCGAGATCGTGGACGAATAGCGAACTTACATTAGCTCTGACGCATGTTTGGGAAAAAAAGCTCACCACGTCGCAAGCTAGTCGCATGTTTGGCATTCCTTATAATAGCTTGCTGATGTACGTGCGCGGTAAATATGGGAAGAGTCTCAAGCTGGAGCAACTGCGTAGGAATTGTACCGGCACCAACACTCCCGAGATTATGAACAACAATAACATCAAGCCCGTCCAGCAGTCACCGCAGATGAGCCACGCGCTCGCCAGTCTATCGTTGCAGCATCCAGGTGACAACAGCGGCTTCGCTTCCCATCGCTCCTTGATTAGCGGCAACATGACGCAGCCGCAAGGTTTCTACGCCCCCGACTATGCTGCCGCGCCCTATCCTCTGGCGGTGAATATGATGCATATGTTACCTCCGAGCGAGCAGAAAACCTTCGAATCGTCCGTGAATTCAAGCGGCGACGGAATTGGATGTCCAGGCGGTGGTGGAGATGGCAACGGTGACGGTGATCTGACGAACTCGCAGACCAGCGAAACACCGTCGCCTATAGTcgatcatcatcatcatcatcaggagtcgtcgtcgtcgtcgtcgtcgatgcAACCGCAACCGACACAATCGGCGCCTGCGTTGCTACAACAGAACGGTTCGGATTAG
- Protein Sequence
- MSSVGNSPDRMGVQSLYSLRWNNHQAHIQQFFQELLHEENLVDVTLICAETSVKAHKVVLSACSPFFQRIFAENPCKHPVIVLKDFSNHELSTLIDFMYGGEVKIAQEELPGLMRAAECLQVRGLSSSEPRLVSEEPRPSSSSSTLLEFTTPDDARHGTPEEDDNALENTKEIKPTLFQQTRDHPTKPLIGHMNFGIRESCGSPLMPRRKQARPRRRSGELLPQDLSRRPTPPASLSPLPSVLNLSGNQHQAQQQQQQLQLQQPQYSQQMINRNNQQQMINAQQNPQHQQQQEDMAENLSMKKSMSPSGLEQHRVKTEGSEATSSPRGSPLTGTSLMHPDGSIQDIPAAAVAAAVATVIPSMSLTQTQPSEYLTSLGHLASQWLPGQTSLPPPPPQGHHPREDSPHGSGRPHHAYQQQQQQEPSIVPRRNSLSMFTPLDGVTLGGGLFPHTGYDRTVLASDSFLADSFNHETLQNIFSAPNLGPPPKKTKKHRSDSDGTSQRRWSDHNSRTMAVNRPKGQHSAPRGGPPRSWTNSELTLALTHVWEKKLTTSQASRMFGIPYNSLLMYVRGKYGKSLKLEQLRRNCTGTNTPEIMNNNNIKPVQQSPQMSHALASLSLQHPGDNSGFASHRSLISGNMTQPQGFYAPDYAAAPYPLAVNMMHMLPPSEQKTFESSVNSSGDGIGCPGGGGDGNGDGDLTNSQTSETPSPIVDHHHHHQESSSSSSSMQPQPTQSAPALLQQNGSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00868979;
- 90% Identity
- iTF_01245332;
- 80% Identity
- iTF_00729448;