Fase005947.1
Basic Information
- Insect
- Formica aserva
- Gene Symbol
- kn
- Assembly
- GCA_037039905.1
- Location
- JAXRKO010000004.1:6274917-6277641[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.3e-25 5.6e-21 76.0 0.0 205 253 1 52 1 67 0.89
Sequence Information
- Coding Sequence
- ATGAGGCGCTTTCAGGTGGTTATTTCTACACAAGTGGGAGTAGAGGGTCCATTACTAGCGGTCTCGGACAACATGTTCGTTCACAATAACAGCAAGCATGGACGCAGGGCGAAACGTTTGGATCCCAGTGATCCTGGCGAATATAATACCCAATGTGCATTAAACGCCCTCATTTATTCAACGCATCGACTTTTCACGGCTAATATGATTCACGCGCGCGAGAGCTTTCAGCCGTTTGCCAATCAAAATCTACTCTCCGAGCGATTCGCGTTCGAGGCATCGCAATTCGAATGCTCGCAGCGTGTTGTTTCCCTCATGCAGCGCGCCTTCCGTCATGGGGTGGGGTCAGTTTTCTTCGAGATCGGTATAACGACTCGAGGAGCTGCGGCGGAACGGAATCGTAAGAGGGTGCAGGAGAGCGCGCCGGTAGAATGGGATATATGGAGTCATAGGGCAATTCAGCAAAGTTTGGCGTCGGCCGCGCATACAAACGGCTGA
- Protein Sequence
- MRRFQVVISTQVGVEGPLLAVSDNMFVHNNSKHGRRAKRLDPSDPGEYNTQCALNALIYSTHRLFTANMIHARESFQPFANQNLLSERFAFEASQFECSQRVVSLMQRAFRHGVGSVFFEIGITTRGAAAERNRKRVQESAPVEWDIWSHRAIQQSLASAAHTNG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -