Basic Information

Gene Symbol
Arid4b
Assembly
GCA_037039905.1
Location
JAXRKO010000001.1:15216394-15224275[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2e-27 1.2e-23 84.8 0.1 1 89 326 413 326 413 0.95
2 2 7.1 4.1e+04 -3.5 0.1 47 65 1424 1442 1422 1453 0.75

Sequence Information

Coding Sequence
ATGCTGGTGAGTAAACAGGCGGGAGAAAATGTAATACGACGTAGACATAGAGCAACAACGGGAGACGATCCACCGTCCCTATCGGTAGGTACGGAAGTTAGCGCTAAGTATAAGGGTGCCTTCTGCGAAGCAAAGATCCGTAAAGTAGTGCGATTAGTGAAGTGTCGCGTAACTTATAAACCGCAAGGTTTAGGAACCGCGACACTTTCCGATGATCAAATAAAAGGGACTTTAAGAGTAGGAGCCTCTGTTGAAGCTAAACATGTAGATCGGAAAGAATATGTTGAAGCTACAATTACCAAAATCCAAGACTGCAGTCAGTACACTGTAGTTTTTGATGATGGAGATATAACTACATTAAGGAGAACTGCGCTTTGCCTGAAAAGCGGACGGCATTTTGCGGAGAGTGAAACGTTGGACCAACTTCCGTTGACTCACCCAGAGCACTTTGGGAATCCTGTAATCGGGGGTAGAAGAGGTAGACGATCAAGGCAAGCGCAggATGAAAGCAGCGAAGATGAAGACAGTCCACCGCGAGGCACTCACGATTCTGCTTCCAGTGGAGGTACAAAGGAGGGAATGGAAACTGAACCAGAGATCGGCAAAGTGGTGTGCGTGGAACTTGGTGACAAAAAGAAGAAGGATAATTGGTTCCCAGGATTAGTGGTTGCACCTACTGCTCAAGATACAGTAAGAATACGAGTGAGGGACGATTATTTGGTGCGCTCGTTTAAAGATGCGAGATATTATACAGTACCCAAGAAGGAAGCCACAGAATTCACCAAAGAATTGGTTAATAAAGTTGAGAACAGTACACTGAAGGTTGCAGTAGAGAAAGCGCTTCTATTCTTAGAGAAAAATGAATTACCACCTCACTGGGATAAGGATTCTTTATTTGGGCATTCTGTTTCCAGCGGAAATAGTGATTACGATGGAGAACTTGACTCCGATAGTTCGGACGATGAACCGCGTGAGGAAAAAGACCATTTTGTGGCTcaactatataaatttatggaTGATCGTGGGACGCCTATGAATGTTTGTCCAATGATCGGATCCGAAGATATAGACTTGTATAGGCTTTTCCGGGCTGTTCACAAATTAGGCGGTTACAATCGTGTCACGAATCAGAATCAATGGAAAGCTGTAACACGACGACTTGGTTTAATGATGCAAAATTCGGGACCTTTGTACAATCTCGTGAAACAGgcttataagaaatatttgcaTCACTttgaagatttttataaaaaattaggcTGCACCATGGTAAATCATCCGCGAAGTAGCACGCGTAAACAACGCTCTGGAAGAAGTCTAATTCGCGATAAAGACAGAAATACCCCTGTACCACCACAACCGCCGGCGCAAGTAAAAAGTGACAAGGATGAGGACGAGAAGAAAGCTGCGGATGACGAGAAGAAGGAGATTAAGAAGGAACCAGTGAAAGAAGAggagattataaaaataaagaagaaagaagaatCCGAGGGGAATGATAGTAGTCAGGAGAGCGATGTAAATATAGAAGCAGAGGTCGAATCATCATCTAATACTGAAAAATCGCAAAAACCAACCGCGCAAGTTTCTACATCATCTCCTACTACTTCTATTGGCGCATCATCAGCAAGTACATCGTCCGGCCGAGCCAAATCAAAAAGTAAAGAAGATGCCAAGAAAAAGACGACCGAAAAGAAGAAGACGGAAACTAAAAAGCAAGAGAAGAAAGATGATAAACTCAAGGAAGAAGAAGCTACTAAGACGAGATCCAAAGCGAAGGATGATACTGTAAAGAATAAAAGTGCTTCCGAAGGAAGGGAGACTCGAACACCATCCAGAGAAGGGGAAAAGAAAACGTTATCAAAGCAGCGACGTTTAACGGACGAAGAATTGAAGAAACGAGGAAGAAAACGCAAAGAGTATGAAGCGGAGAAGTCGCGTGCCGATGAACAACTTACGGAGACTGCCCCGAGTTACAAGGGTCCCGTGGAGTGTGGCGATAAATTGAAGGTATATTACGGCCCAACTCACGAATCCAAAGTTACTTACGAAGCAAAAGTTATCGAAATTGAGAAGGACGGCCCAGAACCGATGTACCTTGTACATTATACAGGTTGGAATACGAGATACGACGAGTGGATTAAAGCATCCAGAATTGCTCAGAATTTTACACAAGCTCAAGGCAGGGTGAAACGTATCAAGGCCACTCCTAGACCTCAAACCCCCAGTACGAATCTATCCAACAGCATCAGCAATAAGATGAAAGGCACTTGCAGTTCGGGCGCTAACGCAACGCAGAGCCGTCGCCGAGCACAAAGTGTCGCTCCTACTTCCAGTAGCGTTGCTCAGTCAATTTCGACGTCCGCGAAGGAAGTTAAGAAGGAGGAAAAGGACAAGGACAAGGAAACGATGCAACCGACCAGGTCCACTACACCGCTCTCCGTTGCCAGCTCAAGTTCTAGAACTAAGAGTCCTGCCACGCCTGCTAACAGGCAAACCAGGACAACCAGAAATACAGAGCTGTCTGGCATGGAGCATCGGAGGCGCACCAGAAGAACCTCGGGACATACGGATATATCTATCGCGTCGGAAACCGAAGATAGTGAGGCTTATGAATCCGACACTACCGAGACTGAACAGATTAAGACTAAAACAAGAGGTACGGAGGAAAGAAAACGGAAGGAGACGCGTAGTAGAGTGGAAGAGAGAATTAAAGCGGAAGACGTGAGTGACGGTGAAGATGACAAGGATAATCTGGATGAACCGCGTAAAGGTAGACGTTTGAGAAGAACACCCGGCAAATCCCAAGGTATTAAATCGGAACCTGATAGCGACCAGGAGGAACAACCGAAAGGTCGCGATTTCGATCTCAATCAAATACGATCCGAATTAAAAGGTTTCGATAAAGCGGTCAAAGAGTTGGTTAGGATAGAGCCTGAACCCGAGGATGAAATCAAGCAGGACGAAAAAGATAGCATAGTAGCGATCACGGCATCACCCAAGTTGGAAAAAACCGTTGAGACTCCAAAAGTGGAAACTATCGTCGAGACGAAGATAGAAAGTACGGAAGATATATACGAGTTTAAAGAACCGGAGCCGTTCGAGTTCGAGGTGAGGAACAAGAGGGACACGAGCGGTGAGAAggataaattgaaaaagagaatatttgaGGATGAGCCTAAGAGTCCGAAGAAGAAGCAGAAAACGCCGGTCGCGATGCCGGTATTGAAAGAAACGAAACCACTGGAACCACCGGATAATGATTCTCGAAAGAAACCGAGGAAATTGTTCGGTAAGAGATCCGACGATGTGAACGAAGCAACGGTGGCAGTTGCTTCTGGCAGCAAACCTACTCAGGTCGCATCGTATATGGCGTGTGAGGACGTTTTTAACAAGTTTTGCGAGTCCACGTCGTCGTTTAATCAACTGAAATCAATGACTACCGTGGAGGAACTTCCCAATAAGATGTCCGGCTGTTTAAGTCTTTTGTTCAACGATTTGCCGGCGGATGACGAGGGTACGCGCGATGATTCGGAAGACCGTCTAATTATATCAGAGACCGAGGTATCGGAGGCGGAACAGGACAACGTGTTTACGACGTATCAACAAGAGATTCAGTTCCACAGCGGCGGCGAATTAGCGGACATGACCGAATCTAAGAAAAACGAAACGAGTATCGCAATTGAATGCTCGAAGGAAGAAATCAGCAAGGCAACAGCCAGCATGAGTAATAGTAACAAACCCGCTAATTCACTGGATCAGAAACAGAATCAGATCAAGTTGTTGCCTACAGTTGGACAATCGCAATCGGAATTGAGGATGCTGGACACTAAGTTGCTCGATATCACTCCGGTTCCGTCGCCGATCGTGACACCTCCGGCTCCCATAAGCGCAAGACTGCCGGCGACGTCCACGATAGAGGAAAAATTATCGGCCGCTGCTATGGCGTTCCGAAACAAAACTAAAGACGCCAAAAAGATTGCGGACGAGGACACATCCGATCTCGCGCGCAAGATAATCAAAGATGCATCAAAGAAATTAGACGTTTCACAAAGAAACAAAGACGCGGATCGCAGTATTACTGTGATTGAAATAGATGACAAGAAACGCGAACAGGAAGAGATTAACGTGAAAGATCCGTGCAGAGAGATCATGCGTATGACGATTAAAAAAGAGGATGAGGTGCAACAATTGAAGCCAAAGAAAGAAGCAGAACTGAAGAAGTTGAAGGAGGATGCAAAGATCATCGCTGAACACAAGACCAAGTTGCAGGAAGTTTCGAGGGACGAAAGCTGGAAAAACGTCGAGAACGAAAGTGGTAAACAGTCCGAAGAGGAGTATAATAAAGTGACCGATCAAAAGGAAAAAGACAGAATtgaaaatcgtaaaaaacAAATCAATCAGGATCACATTATAGATTCCACAGATAGCAGTGATTCGGAACAGAGGCTCGTGATAGACAATGAGGAATCGCAAGACGTTAAAGTATCGACGTCCAGCTTTGACGTGAAGCTACAAGCGGAATTGGATCGTATACAGAATAGAGAGCAAGATAGATATGCGAGGGGACAGCCCTCATTGAAAGCTTCGCAGAATGTTCAACATcagcagcaacaacaacaGCAAGAGTGTGCGGAATTCAAGGTCGACGTAACACCGGTTTCAAAGACGGACGAAGAGGGCGAGACGATGAATTCACTGCTATGCGAAGAGGAGATACCCGGCTCACCGGCTCCGCCGTCCGAGAGCATCGAACAAGTCAATGTCGGTCCCTCGTGTAGCCCGCCCAAGAGTGAAGTTACCGAGAGCAGCATAGTACTGATGGAGATGCCTTTTGCGAGCGCACCAACCTCAGGTCAAAGTACGACGAGCAGCAGCAGCACTGTTGTCACCCTCAGCATGGCATTGCCAAAGACCGTGGAGGCGTCGATACCGGTTTCTCTGCCAATGCAACAAACCGCATCTTTAAGTATGCGGCAGccacagcagcagcaacaacaacaacatCAACATCAGCAGCAACAACACGTACCGGTTTTAATGCCACCGCAACGACGAGAGAGCAACGAGGCCGCGCCAGTGATGGACAATACGCCGCCGACCACCCCCGATTCGAGTATATCCAATATCTCGGGCTCGCCCAGAGAGGAGAGAACCGGCGGCTCGTCGCCGATCTCCGAAGACAACATTAAGCTCAATCGCGACAGCTTCGAGGCGGACAACGACAGTGCCGGCAAAGGCCCGGGTTTCAGTGAGGACGACACTCTGCCAAACTCCGAGGGCAACTGTGCGGACAGAATTCTCAAACCGCCCGCTAAACGCTCGATCGACGACATGCAGTCACCCAAGAAGCGCAAGAGAAATCGCAAGCACTCGGAATGCGGCGCCGGCGGCGGTGCCGTCATACCGAAGAAACCCGGTAGACAGAATAGTAGGCATGGTAGATACGGAGCTGGAAGTGACAGCGACGATACCAGCGAAGGATCTAATCTTTGCGGGGTTAACAACACGCCGACGAGTCACGCCAACACCATTACCAGTGTCCCTGATCTTGGCACCTACTCGTCGAGATCACCAAGACCAACAAAGTATAACTTTTACGTCGAATTAGATCCTGAATTGGACGGTAGTCAAAGGATAGCTGTGCTACAGCAGAAATTAAACGACTTGCGGAAGACGTATAATGCCGTGAAGGTCGAGCTCGCCGCTATAGAAAGACGCCGAAAGAAACTACGAAGGCGGGAACGAGAGGCGATGAAAGCAGCTAAAGCAGAAATGCAGCAAGCTTGTTCGTGA
Protein Sequence
MLVSKQAGENVIRRRHRATTGDDPPSLSVGTEVSAKYKGAFCEAKIRKVVRLVKCRVTYKPQGLGTATLSDDQIKGTLRVGASVEAKHVDRKEYVEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFAESETLDQLPLTHPEHFGNPVIGGRRGRRSRQAQDESSEDEDSPPRGTHDSASSGGTKEGMETEPEIGKVVCVELGDKKKKDNWFPGLVVAPTAQDTVRIRVRDDYLVRSFKDARYYTVPKKEATEFTKELVNKVENSTLKVAVEKALLFLEKNELPPHWDKDSLFGHSVSSGNSDYDGELDSDSSDDEPREEKDHFVAQLYKFMDDRGTPMNVCPMIGSEDIDLYRLFRAVHKLGGYNRVTNQNQWKAVTRRLGLMMQNSGPLYNLVKQAYKKYLHHFEDFYKKLGCTMVNHPRSSTRKQRSGRSLIRDKDRNTPVPPQPPAQVKSDKDEDEKKAADDEKKEIKKEPVKEEEIIKIKKKEESEGNDSSQESDVNIEAEVESSSNTEKSQKPTAQVSTSSPTTSIGASSASTSSGRAKSKSKEDAKKKTTEKKKTETKKQEKKDDKLKEEEATKTRSKAKDDTVKNKSASEGRETRTPSREGEKKTLSKQRRLTDEELKKRGRKRKEYEAEKSRADEQLTETAPSYKGPVECGDKLKVYYGPTHESKVTYEAKVIEIEKDGPEPMYLVHYTGWNTRYDEWIKASRIAQNFTQAQGRVKRIKATPRPQTPSTNLSNSISNKMKGTCSSGANATQSRRRAQSVAPTSSSVAQSISTSAKEVKKEEKDKDKETMQPTRSTTPLSVASSSSRTKSPATPANRQTRTTRNTELSGMEHRRRTRRTSGHTDISIASETEDSEAYESDTTETEQIKTKTRGTEERKRKETRSRVEERIKAEDVSDGEDDKDNLDEPRKGRRLRRTPGKSQGIKSEPDSDQEEQPKGRDFDLNQIRSELKGFDKAVKELVRIEPEPEDEIKQDEKDSIVAITASPKLEKTVETPKVETIVETKIESTEDIYEFKEPEPFEFEVRNKRDTSGEKDKLKKRIFEDEPKSPKKKQKTPVAMPVLKETKPLEPPDNDSRKKPRKLFGKRSDDVNEATVAVASGSKPTQVASYMACEDVFNKFCESTSSFNQLKSMTTVEELPNKMSGCLSLLFNDLPADDEGTRDDSEDRLIISETEVSEAEQDNVFTTYQQEIQFHSGGELADMTESKKNETSIAIECSKEEISKATASMSNSNKPANSLDQKQNQIKLLPTVGQSQSELRMLDTKLLDITPVPSPIVTPPAPISARLPATSTIEEKLSAAAMAFRNKTKDAKKIADEDTSDLARKIIKDASKKLDVSQRNKDADRSITVIEIDDKKREQEEINVKDPCREIMRMTIKKEDEVQQLKPKKEAELKKLKEDAKIIAEHKTKLQEVSRDESWKNVENESGKQSEEEYNKVTDQKEKDRIENRKKQINQDHIIDSTDSSDSEQRLVIDNEESQDVKVSTSSFDVKLQAELDRIQNREQDRYARGQPSLKASQNVQHQQQQQQQECAEFKVDVTPVSKTDEEGETMNSLLCEEEIPGSPAPPSESIEQVNVGPSCSPPKSEVTESSIVLMEMPFASAPTSGQSTTSSSSTVVTLSMALPKTVEASIPVSLPMQQTASLSMRQPQQQQQQQHQHQQQQHVPVLMPPQRRESNEAAPVMDNTPPTTPDSSISNISGSPREERTGGSSPISEDNIKLNRDSFEADNDSAGKGPGFSEDDTLPNSEGNCADRILKPPAKRSIDDMQSPKKRKRNRKHSECGAGGGAVIPKKPGRQNSRHGRYGAGSDSDDTSEGSNLCGVNNTPTSHANTITSVPDLGTYSSRSPRPTKYNFYVELDPELDGSQRIAVLQQKLNDLRKTYNAVKVELAAIERRRKKLRRREREAMKAAKAEMQQACS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00729847;
90% Identity
iTF_00109610;
80% Identity
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