Fari003826.1
Basic Information
- Insect
- Fopius arisanus
- Gene Symbol
- nfxl1_1
- Assembly
- GCA_000806365.1
- Location
- NW:327052-329953[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 1.1 5.4e+03 -3.2 1.1 15 19 125 129 124 129 0.81 2 22 0.044 2.2e+02 1.2 1.9 4 10 160 166 159 166 0.97 3 22 1.3e-08 6.7e-05 22.0 18.2 1 19 174 191 174 191 0.99 4 22 1.6 8.3e+03 -3.8 1.4 9 13 197 201 196 202 0.76 5 22 3.8e-07 0.0019 17.4 16.1 1 19 227 244 227 244 0.99 6 22 2 1e+04 -5.0 2.3 9 13 250 254 249 254 0.74 7 22 2 1e+04 -4.3 1.4 5 10 268 273 268 273 0.85 8 22 5.9e-05 0.3 10.4 13.2 1 19 279 298 279 298 0.93 9 22 8e-07 0.0041 16.3 8.6 1 18 334 351 334 352 0.97 10 22 0.081 4.1e+02 0.3 12.1 1 12 386 397 386 398 0.95 11 22 1 5.1e+03 -3.2 1.0 6 10 406 410 405 410 0.90 12 22 1.2e-07 0.00059 19.0 14.8 1 19 416 434 416 434 0.93 13 22 2 1e+04 -4.2 0.8 6 10 463 467 463 467 0.95 14 22 0.00027 1.4 8.2 8.8 9 19 482 492 480 492 0.90 15 22 0.0021 11 5.4 6.2 1 12 502 512 502 512 0.96 16 22 0.85 4.3e+03 -2.9 5.8 14 18 543 547 543 548 0.89 17 22 1.9 9.7e+03 -4.0 3.5 9 18 565 578 565 579 0.75 18 22 1.7e-05 0.084 12.1 6.7 1 12 584 595 584 595 0.97 19 22 2 1e+04 -4.2 3.7 6 10 608 612 605 612 0.88 20 22 0.0011 5.7 6.3 15.5 1 19 620 637 620 637 0.93 21 22 5.1e-07 0.0026 17.0 7.6 1 17 682 697 682 698 0.98 22 22 0.79 4e+03 -2.8 1.1 4 9 734 739 732 739 0.80
Sequence Information
- Coding Sequence
- ATGCGAAAATTCAGGAGAGCTCAGGCCCAGAATCAGGCGTCCATCGAACGACATCTGAATGGAAATGTCCTAGAATCATCGAGCGAtgaggagaatgaaaattctcacgAATCACTCCAGGAGGCTGTCTCCAAAACACTGTCCTCGTATGAGTTTGAAGGTGGAGACACAGAAAAAACTCTGTCATACCTGACTGATTTGTTCCAGTCAGGAGGTGCTGTTTGCCTGATTTGTATATcttcagtgaaaaaaactGATCCAATATGGAGCTGTTCGACGTGTTACAATTTTCTCCACTTGACGTGCATCCAGCACTGGATCCGAGACAGCCTGACGTCAAAACACTCAAAAGGTATTCCACCAGTGTGGGCATGTCCAAAATGTCGAACAGAGTATCCAGAGTCCTCCACACCCACATCGTATCTCTGCTTCTGCCAAAAAACAAAAGACCCAGAGCCACAGCCCTGGATAATACCCCACTCCTGCGAGGAGAAATGTTCAAAGCCTCTGAATCCCCCCTGTGGACACACGTGCACCCTTCTGTGCCATCCAGGGCCCTGTCCCCCCTGTCCGAAGATGGTGTCGACGACGTGCCACTGTGGAAAGCAGCCACTACAGCCACGTCGCTGCAACACCAAGTCCTGGAGTTGCAGAGCCCCTTGCAACAAAATCCTCCCCTGTGGCCACACCTGCAAACTAGAGTGTCACACTGGCCCTTGTCTACCCTGTCCAGAAGTGGTATCAACCCCCTGTCACTGTGGCACCTCGACAAAATCCCTGAAGTGCTCAGAAATCACCTGGAGATGTCCAAAAAAATGCACCAACCAGCTAAACTGCAAAATTCACACGTGTGAGGGCACCTGTCATGCACCAGGTGACTGTGGTGACTGCCCAGTGGCAAGAAATAGGACCTGCccttgtggaaaaaaaaagtacaacgTCTCCTGCAAGCAGAAAACACTGCCAACGTGCGGAGACACTTGTGGAAAACTCCTGGACTGTGGCACTCACTTCTGCAACATGCGCTGTCATCTCGGTGACTGTGGCCAGTGCCTGGAGGTCGTTACCAAGGCGTGCAGGTGTGGCTCCTACACGAAGGAGATATCCTGCACCAAAGAATTTCACTGCAACAAGAAGTGCACGAGTATCAGAGCGTGTGGCAAGCATCCATGCAACAAAAAGTGCTGTGACTGCAGCAAGACTGGGATAAATCCATGTGAGAAGATCTGCGAGAGTTCCCTCAACTGTAGGAAGCACAAGTGTACAGCCCCATGCCACTCTGGTCCCTGCTACCCCTGTCCCAGAACTATCACCTTCCAGTGCAGGTGTGGCAACAGCAAGATTGAGGTGCCATGTGGCACCAGGAAGAGAATCAAACCCCCTCACTGTAACAAATTGTGTAGAATTCCACCGATTTGCCATCATCCTAAGCAAGAGTCCCACAAGTGTCATCAGGGCAGTTGTCCCCCATGCAAGAAAATTTGTCATCTGGTGTATCAGAGATGTGGACACCAGTGTGTCGCTGTCTGTCATAGCAAGGTGTGGGTCAAGGTGAGGGTCAATGGTGTCGCACAGCCAGCTGGACCCTGGGAGTTATCTAAGGACCGAATGGAACTCAAAACCCTTCCCTGTCCACCCTGCGAGGTCTCTGTTATGGTGACCTGTCTGGGGGGACATGAGACTAGGCCCTGGCCATGCCATATTGCTATTCCTGGATCCTGTGGGAGGGAATGTGGCAGGGGACTGCCTTGTGGTAATCACAATTGTGAGATTGTCTGTCATAAGGTGAGGGGAGCTGGTGATGTCGACGATTGCATGGAGTGCGAGGAGCCCTGCAAACTGCCGAGGCCTGATGGATGCTCTCATTTGTGTCCAAACAGATGTCATCCTGCACCATGTCCACCCTGCAAGCAACCCGTCAAGATTGCCTGTCATTGTGGCCTCAATAGCTTGTACAAAAGGTGTGTCGAGGTCACTAGCACCAGGGGCAAGGACAGGGACGAGATGCTCAAGTGTGGCAATCAGTGTCCACGAAATTACTCCTGTGGCCACCGGTGCATTGACAACTGTCATTCGGGTAACTGTCGCCCCTCAGACATTTGCAACAAGCGAATTAAAATCACTTGCAAGTgccagagaataaaaaaatcagttctCTGCACGGAAGTGCAGAGGGGAAATGTGAAGATCGAGTGTGACCATCAGTGCAAGGAGCTGAAGCAGCAGAAAGAACGCGCCCAGGAGGTGGAGTTGGCgagaaagaagaaagaggAGGAGTTGAAGAATCAGAGGGAAGTGGAGAAATTCGAGAGGAAGTTCAAGCCTCGGAGGAAGGGAAAGGAGAGGACAGAGAGTGTTGAATGCGAGAGGAGCAACAATCGAATGTACATGATGCGAGGTCTTTACTTCGCGGTCGTATGCGTCATAATTGGAGTTGTCACGTTTTATATGACTGAGAGAATTTAA
- Protein Sequence
- MRKFRRAQAQNQASIERHLNGNVLESSSDEENENSHESLQEAVSKTLSSYEFEGGDTEKTLSYLTDLFQSGGAVCLICISSVKKTDPIWSCSTCYNFLHLTCIQHWIRDSLTSKHSKGIPPVWACPKCRTEYPESSTPTSYLCFCQKTKDPEPQPWIIPHSCEEKCSKPLNPPCGHTCTLLCHPGPCPPCPKMVSTTCHCGKQPLQPRRCNTKSWSCRAPCNKILPCGHTCKLECHTGPCLPCPEVVSTPCHCGTSTKSLKCSEITWRCPKKCTNQLNCKIHTCEGTCHAPGDCGDCPVARNRTCPCGKKKYNVSCKQKTLPTCGDTCGKLLDCGTHFCNMRCHLGDCGQCLEVVTKACRCGSYTKEISCTKEFHCNKKCTSIRACGKHPCNKKCCDCSKTGINPCEKICESSLNCRKHKCTAPCHSGPCYPCPRTITFQCRCGNSKIEVPCGTRKRIKPPHCNKLCRIPPICHHPKQESHKCHQGSCPPCKKICHLVYQRCGHQCVAVCHSKVWVKVRVNGVAQPAGPWELSKDRMELKTLPCPPCEVSVMVTCLGGHETRPWPCHIAIPGSCGRECGRGLPCGNHNCEIVCHKVRGAGDVDDCMECEEPCKLPRPDGCSHLCPNRCHPAPCPPCKQPVKIACHCGLNSLYKRCVEVTSTRGKDRDEMLKCGNQCPRNYSCGHRCIDNCHSGNCRPSDICNKRIKITCKCQRIKKSVLCTEVQRGNVKIECDHQCKELKQQKERAQEVELARKKKEEELKNQREVEKFERKFKPRRKGKERTESVECERSNNRMYMMRGLYFAVVCVIIGVVTFYMTERI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00439148;
- 90% Identity
- -
- 80% Identity
- -