Fari003283.1
Basic Information
- Insect
- Fopius arisanus
- Gene Symbol
- pnr
- Assembly
- GCA_000806365.1
- Location
- NW:171955-184111[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.74 1.3e+03 -1.7 0.3 2 12 229 244 229 246 0.73 2 2 8.8e-17 1.5e-13 49.3 5.1 1 35 424 457 424 458 0.98
Sequence Information
- Coding Sequence
- ATGTTCAATGTACCGCCCAAGTTCTACGAGCTGTGTCGCCTTTGTTTATCGTCGGATGGTGTCAAATTGTCGATATTCGAGGAGGAAGGGGCACAGCGTAATTTTGCCGACAAAATACTAACGTGTCTGTCGATATCGGTGAACGATGGCGACTCCCTGCCGCCCATCATCTGTCACCGGTGTGTGTACAAACTGGATGTACTCCACAACTTTCGTGAGGTGTCTCGTAAATCCGACGTCATACTCAAACAGTACCTGGACTATGCCAAGCAGTTGTCATCAGCAGACAACCAGGACAAGTCTTTCTCCACTGCCAAAATAGCTGACCTGAGTCCACTGCAATCATTTCTTCAGCTGAACAAAACCCTCTTCAATGAGGAGCCCAACTCCCCCGCAAGCATCAATCAAAATGTATTACCTCAAACGCAGACCCATCACCTCGAATTAAGGGCTAATGATATGCCAGATTCTGAAAATGTCAAGTGCGAGCCTGAGGACGACACGTGCTCAAACAGCTCTGATCCAGACAGATTGGAAATTGAGGATCGAGATGAGAATGACGATGATGCAGACGAGAATGGCTATGACATGACAGTTAAACGTAAGAGAATGGATGATAATTACGATGACTCCAAGAGAGAGTCACCCAATCGCAGTCCAGTCAATCGAATGGACACACCTGAGAGCAACTGCTCCGACACTAACATCGACCAGGAGACGACGAAGCTGTGGCAGGCACTTGCTAAACCAAACTACTGGATTTCTGTGGATTCCAGCAATCGGAGTTTAGAGATAACAAGGACCAATGGTGACAAAGTGAACAATGGATTCTCTGGTGAAGCTACGAATCTCCTCCGATCACTCATAAACAACCGGCAAATTGGAATAACAGCGGTGGACACTGGGAGGATTTCCCcccaaataaaattctacaGGGACACGCAGGGCACAACAATGGAGAGGACCGATTGTTCGATTTTGGGAAATCGAACGAACATGCAGTCACTGGAGTGCAAGAGTGCATCAATGGACAGTAATCCGTCCAGTCCAGCCAGTATTGGTAGAAAAGAGACAAAAGGTAGGAGAAAACAGAGTTACCCGAGTAAAGCACCCACGAGTCCAGACACCATGAATTATCAGCAGGATATTAGTGATGAGCAAGCACAAAATTTCACAACGTggtcaaataaattaaagagcAAGgTTGATGAACAGAAGCAGCACTTTGACCAGCAAAGTGGCAACATGACAAAAAAAGTCGACATGTCCTGTACAAATTGTGGTACGATGACGACGACGATTTGGCGTCGTAACATGAAGGGAGAGATGGTATGCAATGCGTGTGGCCTCTATTACAAGTTGCATGGTGTCAACAGACCCCATACCATGAGGAGGGACACCATTCACACACGCAGACGTCGACCGAAGGGTGAAAAACCCACGAGACATCGAAAAAAAGAAGCAGCTATTGCTCCAGCCCAGGCTGACCAGATGGATGCAGAGAGTGCGGACATGCTGGCAGCCCTTCGTCGTCAAATTCAACCGCACCTGATGATGGCTGCTCTGACACCATCCCACCTGTCCTCAGGGCATCCACCATCCAGCCAATTAAATtatcctctccctctctccacgTATATGATGCACGTGAGTACACCTCACATGTATTCAGTAGATTTAGTTAGTCGTGTTACTCGTGACGGTACAAATGGCAGTACAAATTCGAGTGATGCCCTGAACTTTGCGCAGCACGTTAAAGAGGAGCCCAGAGATCGCCACGACTCGGAGGAAATGGATGATTGTGATGATGAAAATGTCTCTGACGTACCTCTCAATCTAGTATCAACGTCACTGTCGGAAGAGGCCCACTGA
- Protein Sequence
- MFNVPPKFYELCRLCLSSDGVKLSIFEEEGAQRNFADKILTCLSISVNDGDSLPPIICHRCVYKLDVLHNFREVSRKSDVILKQYLDYAKQLSSADNQDKSFSTAKIADLSPLQSFLQLNKTLFNEEPNSPASINQNVLPQTQTHHLELRANDMPDSENVKCEPEDDTCSNSSDPDRLEIEDRDENDDDADENGYDMTVKRKRMDDNYDDSKRESPNRSPVNRMDTPESNCSDTNIDQETTKLWQALAKPNYWISVDSSNRSLEITRTNGDKVNNGFSGEATNLLRSLINNRQIGITAVDTGRISPQIKFYRDTQGTTMERTDCSILGNRTNMQSLECKSASMDSNPSSPASIGRKETKGRRKQSYPSKAPTSPDTMNYQQDISDEQAQNFTTWSNKLKSKVDEQKQHFDQQSGNMTKKVDMSCTNCGTMTTTIWRRNMKGEMVCNACGLYYKLHGVNRPHTMRRDTIHTRRRRPKGEKPTRHRKKEAAIAPAQADQMDAESADMLAALRRQIQPHLMMAALTPSHLSSGHPPSSQLNYPLPLSTYMMHVSTPHMYSVDLVSRVTRDGTNGSTNSSDALNFAQHVKEEPRDRHDSEEMDDCDDENVSDVPLNLVSTSLSEEAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00378398;
- 90% Identity
- iTF_00438426;
- 80% Identity
- -