Fari006989.1
Basic Information
- Insect
- Fopius arisanus
- Gene Symbol
- grn
- Assembly
- GCA_000806365.1
- Location
- NW:395534-403861[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9e-17 1.5e-13 49.3 3.1 1 34 472 504 472 506 0.97 2 2 4.9e-18 8.4e-15 53.3 6.7 1 35 531 564 531 565 0.97
Sequence Information
- Coding Sequence
- ATGCGGCACGCAGCGActgagGATACGATGAAGGAGAACTTGATGAAGCAAGATATGAAGATTGACTGGGAGGGTAATCGACCGGAGGAGGGTTCACCTGTTGTACCCAGAACTGCTGAGGAACAGGCGGTGGAGAGTCCTCAGAGTGTTATCACAACTAGAAGACACGTGCGGACAATTACCACTACTGGACACATCACGGAGACTATTGCTGAGGGGGAACCTCATTCACCAGTACCCAGTCCTTCTGAGAAATCCAATAGTATGCAGATGGTACCGGAGGGACATCAGGGACATCAGAACAGGGAGGGCTTCCAGGAGCAGCATTCGCAGTTTATTCACATTAATCAGGAGAGCCCGGGGGAGCAGAGGAGCATTGACCAGCATCAAGTGATCTATAATAATGGAGATGAACTCCAGGTGGAGAATCGAGAGGCTGAAGGACAGGCTCTTGGTATAACTATCAAAGATCAAGCTCGCTACGGAACCCCTGCATCAGAGAGAACAGAAGTGGACAGGGTGTACATCTCCTACGAGGAGAACGACACCCGTCGTGGTGGTCCTGTAATAACAGTACAAGTGCCCGATCCAAGACGTCATCAGTCGCGATTCAGTCCCCAGGAGAATGGCCAGGTGACGAGATATCAGAATTCTCCAGCATCGGGGGAGGACTATGAGGCGAGCGCCATGGTTTCTCATCCACCTACAGTTCACATACCATCACCAGCCCATCCTTATTCACCACCTGTGGAGACCATCAGAACCAACCAGCAACAATTGGGATCCACCTACACCGCGACTACCATCAAGTACGATGTGACTGCTCCAGTGGCCACAGACAATTTGAAAACCAACAGCACTTACACTACCCTTGAACCTGTTGCACTACCTCCAGCACAGACTGTTCAGTATACACCATTCGTTGCTGATGGTTTTCAGTCCAGCAGTTATGCTTATGCTAAACCTGGTGACATCACTTACTTGGCTTATCCCAGTGGACAGGCCAATTTCAGGACTGGAGAGGTCGAATCAAGAGTCTACATAAAGGGTGACCCCACCCTGACCTCATCATCCTTAATTCCCACAAGAACGCAGCTTCACTACGAGCAGCCAGGATCCCCCAATTCCCAAGTGACTATCTATCCAGGATCCACTCAGGCCTTTCAGTACGTGAAGACCTCTGGTGAGACTTATTGGGCGCCTCCTCCGAGCTCCACGTCACCACCGACACTGGGTTACGTCGAGGGATATCCCATTCCCATCACAACGAGTGACGCAGGTACCATGATGTACTCTGGAGGTGGTTACACTGTTGCTGGGGACAATGGTCCGTCTTCTCCATGGCCCACTATACCAGTCAGCGCTTCTGACGAGGCATTTGATCACCAGTTGATTCCAGTTGACACTAAGGAATGCGTCAACTGCGCTGCCAGCATGACACCCTTGTGGAGAAGAGATGGCACTGGACATTACTTGTGCAATGCCTGTGGGATTTACAACAAGATGAACGGTGCCAACAGACCTCCCATGAGGTGCGGAGGCAAAATTAAACAGAGTATCGCACCTAGTGGTCGTAGAACGGGAGTGTTGTGCGCTAATTGCAGAACAAGCAACACAACATTGTGGAGAAGGAACAACAACGGCGAGCCCGTTTGCAATGCCTGTGGCCTCTACTTTAAGCTCCACAACGTGAACAGACCGATGAGTATGAAAAAGGATGGGATTCAGACGAGGAAGAGGAAACCGAAGAATCACACGGGGATGGGGAGTGGATTGGCTGGATCCAGTGGTATCCACAAGACCGAGATGAAGTCAAACCTACTCGTGGACTCGAAGCGGCAGTTGAGTATGTACGGGGGTGGGGTCGTTGATGGGTTTGAGGAACATCATTATCTAGCAATGACAACAGCCCATATGGGGCACGCGCATTCACCCCTCGCATTGCCCTCAGCTGCTGCACTCAATCGTCAGACAACCCTTACtgtGCCCCCATTAGAGCCGATAACAAGTTAA
- Protein Sequence
- MRHAATEDTMKENLMKQDMKIDWEGNRPEEGSPVVPRTAEEQAVESPQSVITTRRHVRTITTTGHITETIAEGEPHSPVPSPSEKSNSMQMVPEGHQGHQNREGFQEQHSQFIHINQESPGEQRSIDQHQVIYNNGDELQVENREAEGQALGITIKDQARYGTPASERTEVDRVYISYEENDTRRGGPVITVQVPDPRRHQSRFSPQENGQVTRYQNSPASGEDYEASAMVSHPPTVHIPSPAHPYSPPVETIRTNQQQLGSTYTATTIKYDVTAPVATDNLKTNSTYTTLEPVALPPAQTVQYTPFVADGFQSSSYAYAKPGDITYLAYPSGQANFRTGEVESRVYIKGDPTLTSSSLIPTRTQLHYEQPGSPNSQVTIYPGSTQAFQYVKTSGETYWAPPPSSTSPPTLGYVEGYPIPITTSDAGTMMYSGGGYTVAGDNGPSSPWPTIPVSASDEAFDHQLIPVDTKECVNCAASMTPLWRRDGTGHYLCNACGIYNKMNGANRPPMRCGGKIKQSIAPSGRRTGVLCANCRTSNTTLWRRNNNGEPVCNACGLYFKLHNVNRPMSMKKDGIQTRKRKPKNHTGMGSGLAGSSGIHKTEMKSNLLVDSKRQLSMYGGGVVDGFEEHHYLAMTTAHMGHAHSPLALPSAAALNRQTTLTVPPLEPITS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00351536; iTF_00438424; iTF_00439134;
- 90% Identity
- -
- 80% Identity
- -