Basic Information

Insect: Fopius arisanus
Gene Symbol: -
Assembly: GCA_000806365.1
Location: NW:1699195-1705960[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.0025 0.17 11.7 0.1 1 21 131 151 131 152 0.96

2 21 0.0062 0.42 10.4 1.1 2 23 162 184 161 184 0.96

3 21 0.11 7.4 6.5 8.6 1 23 194 217 194 217 0.93

4 21 0.18 12 5.8 0.2 5 20 485 500 484 501 0.92

5 21 0.28 19 5.2 1.3 2 23 511 532 510 532 0.95

6 21 0.26 18 5.3 1.2 1 20 559 578 559 580 0.90

7 21 0.11 7.2 6.5 0.0 1 21 727 747 727 748 0.93

8 21 0.00081 0.055 13.2 0.4 2 23 756 778 755 778 0.97

9 21 0.00052 0.035 13.8 0.6 2 23 788 810 787 811 0.94

10 21 0.81 55 3.7 0.4 2 19 831 848 830 851 0.89

11 21 0.37 25 4.8 1.9 1 10 858 867 858 867 0.96

12 21 0.097 6.6 6.6 8.1 1 23 892 915 892 915 0.93

13 21 0.022 1.5 8.6 0.1 1 23 935 957 935 957 0.97

14 21 0.0031 0.21 11.4 1.2 1 23 963 986 963 986 0.96

15 21 0.0034 0.23 11.2 0.1 2 23 995 1017 994 1017 0.96

16 21 0.00075 0.051 13.3 0.5 1 23 1083 1105 1083 1105 0.97

17 21 0.085 5.7 6.8 0.6 2 21 1200 1219 1199 1220 0.92

18 21 0.0026 0.18 11.6 2.5 1 23 1227 1249 1227 1250 0.95

19 21 0.15 10 6.0 2.5 1 21 1260 1280 1260 1283 0.85

20 21 0.062 4.2 7.2 0.9 3 23 1384 1405 1382 1405 0.94

21 21 0.00064 0.043 13.5 0.9 1 23 1456 1479 1456 1479 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.0025	0.17	11.7	0.1	1	21	131	151	131	152	0.96
2	21	0.0062	0.42	10.4	1.1	2	23	162	184	161	184	0.96
3	21	0.11	7.4	6.5	8.6	1	23	194	217	194	217	0.93
4	21	0.18	12	5.8	0.2	5	20	485	500	484	501	0.92
5	21	0.28	19	5.2	1.3	2	23	511	532	510	532	0.95
6	21	0.26	18	5.3	1.2	1	20	559	578	559	580	0.90
7	21	0.11	7.2	6.5	0.0	1	21	727	747	727	748	0.93
8	21	0.00081	0.055	13.2	0.4	2	23	756	778	755	778	0.97
9	21	0.00052	0.035	13.8	0.6	2	23	788	810	787	811	0.94
10	21	0.81	55	3.7	0.4	2	19	831	848	830	851	0.89
11	21	0.37	25	4.8	1.9	1	10	858	867	858	867	0.96
12	21	0.097	6.6	6.6	8.1	1	23	892	915	892	915	0.93
13	21	0.022	1.5	8.6	0.1	1	23	935	957	935	957	0.97
14	21	0.0031	0.21	11.4	1.2	1	23	963	986	963	986	0.96
15	21	0.0034	0.23	11.2	0.1	2	23	995	1017	994	1017	0.96
16	21	0.00075	0.051	13.3	0.5	1	23	1083	1105	1083	1105	0.97
17	21	0.085	5.7	6.8	0.6	2	21	1200	1219	1199	1220	0.92
18	21	0.0026	0.18	11.6	2.5	1	23	1227	1249	1227	1250	0.95
19	21	0.15	10	6.0	2.5	1	21	1260	1280	1260	1283	0.85
20	21	0.062	4.2	7.2	0.9	3	23	1384	1405	1382	1405	0.94
21	21	0.00064	0.043	13.5	0.9	1	23	1456	1479	1456	1479	0.97

Sequence Information

Coding Sequence: ATGGCTCGTGCTATGATCTACAGGGGATCCTCCAGTCTCCTCCAGGTTGATCCACCAGCTGACGAgGTGGACCCTTTGGAGCTGCCGATAAAATTGGAGCCAAGCAGTCCAGAGCCCGAGACGCCGGCAGACCCAGAGGACAGAGTGCGCACACCTCCACCCTCGACGAGTCTCCCATCACCCCGGAGAGATGCCCCATCACCCCAAGAGCCACCAGACTACGACTCATCGGCAAGTTCACTCGTACATTCCCAAAATCCAACCAAAAAGCCACCTAAACGAAGTCACAAGTACGGACACTCCCAAAAACTAGCTCAATTTCTCCTGAACAACAGGAGTGAACTCCAAAACAGTAGACTCCGTACTAGATCCACTCACACCCCATTATTCTACGAATGTCAAGTGTGTTATGTACAGTACAACGATCGAGGTGCTCTCACAAGACACatgaatcaatttaaattcggTTCTAAAAAACGTATAGTCTGTCACGTGTGTAGAATATCCCTAGCCACTCCCCATCAGTTGCTCTCCCACAGGAAATCGGCGCACCGTCACATCGCCTGGCCGCATTCACCTTATAAATGCCACCACTGTCCCCTCACCTACACCCATAAAATGCCCCTACAGATGCACTTGTTCCATTACCACGACATggagaacaatgaaaaattgaagaaacgtCGTGGAGTGGAGCAATCGGTAGTGAGTGATAATGAGATACAACCAAGGAGATCAGCACGTAAACGAAAGAGAGCCCGTTTGGTGCGCAATCGCAGGGATCTGTGTATTCCCAAGGCCACCAAGCCAGGGCCTACATCCTCAAAGACTGGAAGATCCACCCAGATCACCAAAGTAATTCCCTCGACAAACTCAACGAAACCCTCCACGAGTGCGCCTTTCGTCCAAATTCATGCAGTCCCTCAGGAAGTTGAGGCACTCCTCAGTGACTACGAGACGAGTCCCATGAAAAGACGAAGACTTGATCCCCAGGAAGTGTCGATGGACGTCGAGACAAGGTGCTTGAGGTCGGGGCGAACTGTCAAGATACCTGTAGCTGAATCCAGTGACATTCAGGAGCCAGACCCAAAGACTGAACCAAAACAGAAGAGAGTTTCTACACCCGGAAGAAAAGCCTCTTTACCTCAGACTCCGAAGAACGGAACCCCGATGGTTCTAGCCACTAGGAAAATTACACTTCTGCAGATGAAATACAATTGTCGGGATTGTTATGTACCCTTAAGTAGGATTAACGTTCCCGAAGGTCTTGAAGTAAGTGAGACTGAGATGAATCAGTTGGAGGATACATCCAGTGAGATGCCTCACGATGTATCGTCTATTGATCTCCAACTTAAGAATCTCGAGATCGCTCTGAAGAAGCTGGAGGCACCCGACGTACTCACTGACCGGCCaccaggaaaaattgagagactCGAGATATTCAGGTCCAGTATCTGTCGCACCAGATTCACCACAAAACAGAAGCTGATTAATCATTACTTGTGCTTTCACACTAATGCAAGTCAGGATGAGTGCGGAGTATGCCGGATACGGTGTGGTAATTacaggaaattgaagaatcacTTGCTGCTCCACTGTGTCAAGATTATTCAGTCTAAACAGGATCGTTCACCCATTGATCCTAGAGGGCCGTGTgaaaaataccgaaaaaagTATTTCTGCACAGGTTGTAAAAAACGATTCTGGCTGGCATCCTGTCTGGCACAGCATCAGAGTCTCTGCAGACTCGCACCGTCGTATGCACCCCAGGAGAATCCACAGGACATTCCCCAGAAAAACGTTCATGACAATACCCGGGAGACTGCGCAAGATGATACTCAAGAGAATCTCCAAGAAACTCCTCAGGAAGCTCACCAGGAGATCCCAGTGCCTGAGGTAAACGAGCCAATAATGACGAGGCGGACATCTCCAAGAAAACATGACAAAAGAGTGAATTTAATGCAGTCACCCACGATTATCCAGACTGCCAAGACTGTCAAGCCTGCTAAAACACCTAAGACTCCGAAGAGTGATGCCCAGAAGACTCATCGTCAGAAGAATAGTTCAGTGAGAATCGAGGCACGGAGTACCCAAGACTCTCGAAAACAATCCCCAGGACAGGGACCAGTTCCGGAGAAACGTTGGTGGGACACCAGAGTGCCCTATGGAGTTCCAGCCCATCCCTGTTCCATCTGCAATATTAATTTCCAAGCAGCTGCAGGTCTCTCACGCCATGTGAAGATGTACAATCAGCGGGACTTCAGCCGTTGCGAAATCTGTGGTACTCTATTCCCATCGAGAAATCTTCTCTACAGCCACAGAAAAACGGCGCACTGCCCTGAGGCGTCAGATGCAAGAATTCAGTGTCCAGTTTGCGAACAGGCATTCGCCAAGAAGACAGGTCTTCGTgcccacctgttgcacgtCCATCACGATCAAATCATCAGGAACATCGATGAATTCATTGAGCCAACAGTTGGTTACGAGATGAAGTGCAAAATTTGTAAACTCATATTTCAGAGTCGTAGGAGATTCATCGAGCACAGTATGTACTATTTCGACGATGAGACGTATAGCTGTCACAtatgtgataaaaaattctggggtAAATTCAGGTGtcattttcactggaaaatcgAGCACTACTCTAAGGAGATGCAGCAGGCCTATACCCATCACTGTCCAGTGTGCAGTGAGGGTTTCATGTATCAATCTCACTTGCACTCTCACATGTTTCACGTTCACGATTTAGCCAGTGATTCAGCTATAAATGGTGGACACTCAGTGAATACCGAGGATCCATTTGTTTGTGCAACTTGTGAGCAGAGATTTGCCAGTATTGTTTTGCTTGATCAGCACCAGAATCTTCACTCGAATGATGGAAAATACCAGTGTGACAAGTGCGGTAGAAAGTGCAGATCAGTATCGATACTTGAAGAGCACCTGAGGGCGTCACACTCAAATCGTGTACTGCCCCAGGGCAAGTGCCCTATCTGCGGCGAAGGAATATCCTCGAAGACCTCATGGATATCCCACATAAAACACGCTCATGACAATCCAACGAATCAGCCCTCAGAGTTCTGTCTGGAGAACGTCTGCACTcttaatgaattgataagaGACTCGGGGGAGGACATTAATCTCAACAGATCAGGTGATCAGAGCTCTCCTGGTCCTGACGAGGACGTTGTCCTTTTGGATGAGGACGACGTGGGCCTTCCAGAGGTTCAGACTGTCAATATTGAGTTTAATTGCGCAATATGCGACGAGAGATTCACATCGATGCTCGAATTGAAGAGCCACAAGATCACTCATGGACCAGTTACGTACGGATATCAACCGGAAGAGAACTATCAAGTGCCAAAAATATCTGTCAACGAGGTGGCACCCCAGCCACTGGAGACTGTTAATCTTCCCAGTATTCACCCGCAGGACAACAGTGGCTACAGTTATCACACTGACAAAGACCCGTGCAACTTCTCCATCGCGAATATCTACTCAGTTGGTCTCGACGAGTACGAGAAACTGGCGAACAATCAACCCGAGGAGAACGAGACGATTGAACCTGAGGATAATGCGATCACCGAGAATATCCTCAAGTGCGAGGTCTGCCAGCTTGTATTCACCTGCGCAAAAACCCTCCAGAATCACCTGATAAGATACTCCAACACTGGTGATTACATCTGCGAGGTCTGCGGCAGGAGATTCAAGTGGTCGAGGGTATTTCGTTCGCACATAAGAAAACACCACAAGAGAAGGAACAATGCAACACCGATGTACTACTGCGAGCAGTGCGACGAGGCGTTTGcaacgaaaaattccaaacacaTGCACTTCGCTCATATTCATAATGATCTGAATGTCAGGTTGACTGACGACGATATGGCAGATATTGATGGGAAAACTGGCAGGGAGAGTCCAGTGGAGAGGGACGAGATCCAGGAGGGAATCGATACGAAGAGCGTTGAAGAGGTTGACTTGACTGAGGACGAGGAAGAGGCTAGTGAACCACCGACGGCGAAGAATCTTGTTCCAATGAATTCAGTGGTACCTCTCAGTGCTGCTATCAAGCCAACTGTTGCTCAGGCCAGGGTACAACCAACTGCTCATCGTCCAAGTCAGGTTGCTGCATCAATTTGTCCAATTATCTGCAATATCTGTCACATACAGTGCAGGGACGTTGATTATCTTGTTAATCACTTCGAGACAGCTCACAGCATTCGTCTCGCTCCCTATAAACCTAGTGCCCAAATTCCCTATAATTCCAGTATTCAGGGTGAGTGTCAGAGCAATCAGGATAGTCTCAAGAATCATTTGGCTTGGCAGGTGAATTCTAAAAATGATTCTGATCCATCAACTCTCTTTTATTACTGCAAAACGTGCAGAATTCAATTTGctaatgaatattcactgCTCACTCATCTGCGAAATGCTCACGCTAAAACTGAAAGTTTACCAGGAAAACATGATAATTGGAGTAATGATGGTGCCCATAGTGGGGGGCACAGGGAAAATATAGTGGCTAAGGGTCAGCAGTCAACAGGCGGTGTTTCTATTGAAACTTCTTTTATTAGTAGTGAGAGGCATCGATCTGCTGGTGATTCAGCTGGGGATAATGCCATGGATCTGACGAAAAAGAGGAACGATGCTGTTGTCTTATCGAAGATTGATTTAAAGGGGGCTGACAGGCCTTATCGCATTCTTGGGGGGAAGAATCCacagaatattcaattcattagTCTTCAGAGGAAGGACCTTGTTAGTTTGACGAGACAGAGATTGCAGGAGAGCAAGAGTCCTCAGGGGAGTAGCATTCGTTGA
Protein Sequence: MARAMIYRGSSSLLQVDPPADEVDPLELPIKLEPSSPEPETPADPEDRVRTPPPSTSLPSPRRDAPSPQEPPDYDSSASSLVHSQNPTKKPPKRSHKYGHSQKLAQFLLNNRSELQNSRLRTRSTHTPLFYECQVCYVQYNDRGALTRHMNQFKFGSKKRIVCHVCRISLATPHQLLSHRKSAHRHIAWPHSPYKCHHCPLTYTHKMPLQMHLFHYHDMENNEKLKKRRGVEQSVVSDNEIQPRRSARKRKRARLVRNRRDLCIPKATKPGPTSSKTGRSTQITKVIPSTNSTKPSTSAPFVQIHAVPQEVEALLSDYETSPMKRRRLDPQEVSMDVETRCLRSGRTVKIPVAESSDIQEPDPKTEPKQKRVSTPGRKASLPQTPKNGTPMVLATRKITLLQMKYNCRDCYVPLSRINVPEGLEVSETEMNQLEDTSSEMPHDVSSIDLQLKNLEIALKKLEAPDVLTDRPPGKIERLEIFRSSICRTRFTTKQKLINHYLCFHTNASQDECGVCRIRCGNYRKLKNHLLLHCVKIIQSKQDRSPIDPRGPCEKYRKKYFCTGCKKRFWLASCLAQHQSLCRLAPSYAPQENPQDIPQKNVHDNTRETAQDDTQENLQETPQEAHQEIPVPEVNEPIMTRRTSPRKHDKRVNLMQSPTIIQTAKTVKPAKTPKTPKSDAQKTHRQKNSSVRIEARSTQDSRKQSPGQGPVPEKRWWDTRVPYGVPAHPCSICNINFQAAAGLSRHVKMYNQRDFSRCEICGTLFPSRNLLYSHRKTAHCPEASDARIQCPVCEQAFAKKTGLRAHLLHVHHDQIIRNIDEFIEPTVGYEMKCKICKLIFQSRRRFIEHSMYYFDDETYSCHICDKKFWGKFRCHFHWKIEHYSKEMQQAYTHHCPVCSEGFMYQSHLHSHMFHVHDLASDSAINGGHSVNTEDPFVCATCEQRFASIVLLDQHQNLHSNDGKYQCDKCGRKCRSVSILEEHLRASHSNRVLPQGKCPICGEGISSKTSWISHIKHAHDNPTNQPSEFCLENVCTLNELIRDSGEDINLNRSGDQSSPGPDEDVVLLDEDDVGLPEVQTVNIEFNCAICDERFTSMLELKSHKITHGPVTYGYQPEENYQVPKISVNEVAPQPLETVNLPSIHPQDNSGYSYHTDKDPCNFSIANIYSVGLDEYEKLANNQPEENETIEPEDNAITENILKCEVCQLVFTCAKTLQNHLIRYSNTGDYICEVCGRRFKWSRVFRSHIRKHHKRRNNATPMYYCEQCDEAFATKNSKHMHFAHIHNDLNVRLTDDDMADIDGKTGRESPVERDEIQEGIDTKSVEEVDLTEDEEEASEPPTAKNLVPMNSVVPLSAAIKPTVAQARVQPTAHRPSQVAASICPIICNICHIQCRDVDYLVNHFETAHSIRLAPYKPSAQIPYNSSIQGECQSNQDSLKNHLAWQVNSKNDSDPSTLFYYCKTCRIQFANEYSLLTHLRNAHAKTESLPGKHDNWSNDGAHSGGHRENIVAKGQQSTGGVSIETSFISSERHRSAGDSAGDNAMDLTKKRNDAVVLSKIDLKGADRPYRILGGKNPQNIQFISLQRKDLVSLTRQRLQESKSPQGSSIR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -