Fari003140.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Fopius arisanus
Gene Symbol
ZFX
Assembly
GCA_000806365.1
Location
NW:129833-138675[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 0.75 51 3.9 0.1 3 23 15 35 14 35 0.94
2 15 9.6 6.5e+02 0.4 3.8 1 23 774 797 774 797 0.80
3 15 0.0062 0.42 10.4 0.4 2 23 881 903 880 903 0.95
4 15 0.00077 0.052 13.3 0.3 2 23 916 937 915 937 0.97
5 15 1.9e-06 0.00013 21.4 2.2 2 23 940 961 939 961 0.97
6 15 0.001 0.07 12.9 0.3 1 23 967 989 967 989 0.97
7 15 1.5e-05 0.001 18.7 4.5 2 23 996 1017 995 1018 0.95
8 15 0.066 4.4 7.2 3.7 5 23 1031 1049 1030 1049 0.97
9 15 1.3e-05 0.0009 18.8 1.5 3 23 1056 1077 1055 1077 0.97
10 15 0.0074 0.51 10.1 0.5 2 23 1093 1113 1092 1113 0.97
11 15 4e-05 0.0027 17.3 0.7 1 20 1119 1138 1119 1141 0.92
12 15 3.9e-05 0.0026 17.3 2.1 1 23 1149 1171 1149 1171 0.99
13 15 0.0014 0.095 12.4 3.2 1 23 1177 1199 1177 1199 0.97
14 15 2.5e-06 0.00017 21.1 3.9 1 23 1205 1227 1205 1227 0.99
15 15 0.00018 0.012 15.2 7.2 1 23 1233 1255 1233 1256 0.96

Sequence Information

Coding Sequence
ATGGATTTAAACCTGACATCAGACACTGGCGGTGCAGTGGCCTGCCCAGTGTGCACCCTGTACCTGAGGGAGGGCATATCCCTCCAACGTCACCTGGACACACATCCAAAGGAGCAGGTGATCGAGGCCCTGATAAAAGCGAGCAGCGGCTCGCCGTCCCTCCCCCCGAGTTTACCACCCTCTTTGCCCCAAGCCCAGGGTGCCCAGGGGCCAGCCCAACCCCAGACTCAGTCTCACTTACCTCAGGGTTCCTACCCCATAGGTCCAGTATTCGAGTATCCCCCAATGAATGCCATGATGCCACCTCAATTCGCCTCCTTCAGTTATCAGCAGTTCGTCAATAATGGAACAATGATGATACCCCAGTACTCgataccaccaccacctcagGCCAATCAGATGATGCAGATGCTGTACAATCCGTACAGCATGTACCAGCAGCAACAGGTACCCACCGTGCAGATGCTATCACCAGTTGCAACAATTCCAACCACCAGGATGCGACCGGTTGTCACTGTGGCTGAGACTAATACCAGGAGTATTGTCCTTTCAGGACAGGGAAAGGATATACCAGAGATTATTGAggagaatgagagaattttGCCGGATATTGAGCCACCTGACGGCTCTGAGGACGTGGGGGCCAGGCTGCAGAGGCAGATGGAGGACAGGGGGCAGCAGACTATACCCAGGAGGGTTGAGCCTGAGCCTGAGCCTGAGGGACCCaaggacgaggaggaggagggagAGAGCATTGTTCCTGAAATCGTGGAGCCCAGGGATGAGCATATACTCCAGCGGTTCACCAATTTTCAGGGGCAGAAGGACAGGCAGAGTGAGAAAGACAGGGAGGCGAGTCAGGTGGAGGAGAGGCACCAGGTGAATGAGGGGCAGGAGGACGAGGTGaatgatttgaatgatttgaatgatttgaatgatttGAGTGAGGTGAGTGAGGGGCAGGACGGTCAGGAAAATCGTCGTGAGGTTTTGGGTGAGAAGGATAGGCGTGGGGAGATGAGAAATGGGGAGGCCGAGCATCTGGAGCGTTTTATCCTTAATATGATGGAGGATAATGAGAGATGTGAGGTGTCCAGGCTGCAGGCACAGACTGCTGATATCAGTGCGATTCAGGTGCTCACGATTGAACAGGGTAGGAGCTCTTTGGAGATTGATTACAAGCGCCTGGAGGCGCCGTACAGGTACAGGAGTAGTTTTAGTGCTCCGGCTTCACCGAATCTCGTTAAGAAAGCGAGGGGGGCCTTCGCCAGGTCCGAGTGCGGGTCAATTGAGAATCTCAGTGTTTATCCAGTGGGTTTTGAGGCGTCGGCTCTCCAGGAGGACCTCGAGGACAATCAGGAGGAGAAAAATGTGCCAGATAATTTTGACGAGGAGGACATGGAGCTTGAGGAGATGACCAATCCTCGTATGAATTTCGGAAAGGGAAATGAGCAGAATAGGTGCTCCTCACCATTGTCGACGATCAGTAGAATTTCCGGGGTGAAAGTCAGAACGAGTCTGAACAAACCCGGATCACTAGCTTCGGTGCACTCTTTCAGGGGACTCAATGGGGAGAGCGATGACGAGTGTGAGGACCACCAGAAAATACCTCTCGACTGCTCCCAGGGGGAGATCGAGGGAAGATTCGACACTGGGTGTCATCAGTCTGTTATCACTGAACACATCAGCTCGTTTACTGTTAATTCCAATCAGATTTGTGGTGAGAGTTACTCAATGTCCAGTGGAAAGGGACAAGGTCAAGCAATTGGGATTGAAGGAATGGATCCCACCACCAGCGCTGACTCTAAGAGCTTTCAATGTATGGCTAAGAGCATGGGTCAGATTCCAACTGCTGAGTTGCTGAATATTAATGAGGATGCACACTCTGGGCCTATGAACGTTTTTGAGTTTGATGGGCTGCAGATTCTGGTACCCAGTACTTTTATCAGTGAATCCAGTCAGAAGGCCATCAGTGCCACTAGTCAGCAGTCTATGGCAAGCAGTGAGTGTGGAGGTATGATTGATGAAGAGGTCAAGAGTGTTAATATGAGGGCTGATGAGACAATGCCACCCAGAGGGGAACTCTCTGAGCAGGAGAGCAACGGATGCACTGAGCATTCTGCTTGGCAGCTGTACGTGGGTCAAGAATCCTCTCGCATGTCGACGTCCTACGACCTGATGGCACGAGAATCCTGGGAGGAGTCCGAGGGCTCAGACAACGAGTCAGCAGTTCCTCTGCTGGACAGTCGATCTCTAGCGACGCACTTCACGTCGTCCCTGTTTCTAGATCGAGACAGAAAGACACCGACAAAACGAATATTCAAGTGTTCCTTCTGTACAGAGGTATTCGATTGTCCAAAAGAGCGTCGTGTTCACAGTACAACATTTCACAAAGAGGCAGGACCCtccaacagcagcagcaacagcgaTCTCCTGGAGACACCCGAGTCCAAAGATCTGAAACTCCTGGATGGTCGAATGAACGCCTTCGAGGAGATCTTCGTTCCAGGTCTACATGTACCCACGTATCAACAGTCACAACCACCTCTTCTCCACCAGCTACAGCCACCACAGCAGCACGCAGACATATTAAAACAAGATAATGACGAGAAAGTGGAGATACCAACGGGTCTCGATGTATCATGTGCCATGTGTGTCCAGAGATTCTCCTCCGAGCGCTCCCTCCAGGTGCACAATCGCCGAGTTCACAGTACAGAAGTAGCAAGACGCCTCCACGACATATCAAAGTGTCAAATTTGCAACGAGGAGTTCCCATCAGTCGTCCAATTCAATactcacttgaaaattcatcccctGGAGTGCCCCCAGTGTGGCAAATACTTTTatagaaaacaaaatttcaaactcCACATGAAACGTCACCTGGGAATAAAACCCTTCCCCTGCACAGTGTGCGACAAGGCTTTTCTCACAAAGCAGAAGCTCGACGAGCACATGAATGGACACACTGGTAATGCACCAGTAAAATGCAACCTGTGCAATGAAACATTCAGGAGATACTCCAACCTGACGCAGCACAAGAATCGCCATCACTTGAATGTAAAGAAAAAGCTGAAGGATTACATATGCCACTGTGGCGAGGTATTTCACACCAAGAAGAAGCTCGCCTGGCACAAGGAGACACACGACGAGAAACCCAAGGCCTGCACATACTGCAACGAGAGATTCATTCACATGGCTAGTCTCACCAGGCACATGAGGAGAGCCCACAACAGGAGATTTGTACCAGATGCCCAGAGGGAGAATGAGAATGTCGAGTGTCCAATATGTAAGTGCATTTATCTAAGATCATCTTTGTCAGTTCACATGAGGGTTCACAATGGGGAGAGGCCCTATGAGTGCCAGGTATGCTCCAAGGCATTCAGCACAAAGTGGAACTTGCAATTGCACAAGTGGACTCATGCTGCTAGAAGTACTAAACCGTTTAAGTGTAATCAGTGCAGCGCTGCTTTCTACAGACACAGTGATTTTATTGCTCATATGAATTCACATAGAAATGTTAGGCCGTATACTTGTAATTACTGTGGGGCACAGTTTATTAGGAAGTATAATTGTTTAAGACACGTTAAGGAGCATGAGGAGAATAAACAGTACACTTGTGATGTTTGCAATAAGACTTTTCACAGGTCTTATTATCTCAAGGAGCATTTGAGGGTGCACAGTGGGGCGAGACCTTATACTTGTCATATTTGTGGCAAGAGCAGTAGTACGAAGAGCAATCATAATAAACATGTCAGAATTCATCATGCTAGGGAACCCGTTAATACTGAGAATTGA
Protein Sequence
MDLNLTSDTGGAVACPVCTLYLREGISLQRHLDTHPKEQVIEALIKASSGSPSLPPSLPPSLPQAQGAQGPAQPQTQSHLPQGSYPIGPVFEYPPMNAMMPPQFASFSYQQFVNNGTMMIPQYSIPPPPQANQMMQMLYNPYSMYQQQQVPTVQMLSPVATIPTTRMRPVVTVAETNTRSIVLSGQGKDIPEIIEENERILPDIEPPDGSEDVGARLQRQMEDRGQQTIPRRVEPEPEPEGPKDEEEEGESIVPEIVEPRDEHILQRFTNFQGQKDRQSEKDREASQVEERHQVNEGQEDEVNDLNDLNDLNDLSEVSEGQDGQENRREVLGEKDRRGEMRNGEAEHLERFILNMMEDNERCEVSRLQAQTADISAIQVLTIEQGRSSLEIDYKRLEAPYRYRSSFSAPASPNLVKKARGAFARSECGSIENLSVYPVGFEASALQEDLEDNQEEKNVPDNFDEEDMELEEMTNPRMNFGKGNEQNRCSSPLSTISRISGVKVRTSLNKPGSLASVHSFRGLNGESDDECEDHQKIPLDCSQGEIEGRFDTGCHQSVITEHISSFTVNSNQICGESYSMSSGKGQGQAIGIEGMDPTTSADSKSFQCMAKSMGQIPTAELLNINEDAHSGPMNVFEFDGLQILVPSTFISESSQKAISATSQQSMASSECGGMIDEEVKSVNMRADETMPPRGELSEQESNGCTEHSAWQLYVGQESSRMSTSYDLMARESWEESEGSDNESAVPLLDSRSLATHFTSSLFLDRDRKTPTKRIFKCSFCTEVFDCPKERRVHSTTFHKEAGPSNSSSNSDLLETPESKDLKLLDGRMNAFEEIFVPGLHVPTYQQSQPPLLHQLQPPQQHADILKQDNDEKVEIPTGLDVSCAMCVQRFSSERSLQVHNRRVHSTEVARRLHDISKCQICNEEFPSVVQFNTHLKIHPLECPQCGKYFYRKQNFKLHMKRHLGIKPFPCTVCDKAFLTKQKLDEHMNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNVKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRENENVECPICKCIYLRSSLSVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDFIAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKQYTCDVCNKTFHRSYYLKEHLRVHSGARPYTCHICGKSSSTKSNHNKHVRIHHAREPVNTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-