Basic Information

Insect: Fopius arisanus
Gene Symbol: -
Assembly: GCA_000806365.1
Location: NW:86223-89477[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0069 0.47 10.2 0.0 1 23 328 350 328 350 0.97

2 11 3.1e-06 0.00021 20.8 1.5 2 23 421 442 420 442 0.97

3 11 1.8e-05 0.0013 18.3 0.2 1 23 448 470 448 470 0.98

4 11 0.00016 0.011 15.4 2.4 1 23 476 498 476 498 0.98

5 11 3.1e-06 0.00021 20.8 1.4 1 23 504 526 504 526 0.98

6 11 0.0001 0.0069 16.0 1.0 1 23 532 554 532 554 0.98

7 11 9.3e-08 6.3e-06 25.6 0.5 1 23 562 584 562 584 0.98

8 11 0.0031 0.21 11.4 0.2 1 23 590 612 590 612 0.94

9 11 1.8e-05 0.0012 18.4 2.5 1 23 618 640 618 640 0.98

10 11 1.3e-05 0.00092 18.8 0.6 1 23 646 668 646 668 0.98

11 11 0.00025 0.017 14.8 2.2 1 23 674 696 674 696 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0069	0.47	10.2	0.0	1	23	328	350	328	350	0.97
2	11	3.1e-06	0.00021	20.8	1.5	2	23	421	442	420	442	0.97
3	11	1.8e-05	0.0013	18.3	0.2	1	23	448	470	448	470	0.98
4	11	0.00016	0.011	15.4	2.4	1	23	476	498	476	498	0.98
5	11	3.1e-06	0.00021	20.8	1.4	1	23	504	526	504	526	0.98
6	11	0.0001	0.0069	16.0	1.0	1	23	532	554	532	554	0.98
7	11	9.3e-08	6.3e-06	25.6	0.5	1	23	562	584	562	584	0.98
8	11	0.0031	0.21	11.4	0.2	1	23	590	612	590	612	0.94
9	11	1.8e-05	0.0012	18.4	2.5	1	23	618	640	618	640	0.98
10	11	1.3e-05	0.00092	18.8	0.6	1	23	646	668	646	668	0.98
11	11	0.00025	0.017	14.8	2.2	1	23	674	696	674	696	0.97

Sequence Information

Coding Sequence: ATGTCTGTTGTCGATGAGTTCGATTACCTTTGCCGTTTATGTGCAACGAAAACTGAAATATTGGTGGGACTTCCGATATTCGAGCATGGGGAGAATCTCAGGAATATTGATAAGAAGATAACAGAGTGTCTTCCGATACGAGTATTGATGACAGACGAGCTGCCAAAGGTCGTCTGCGAGCAATGTGCCTACAAATTAGACGACATAATGGATTTTCGTGAGAAGTGTCGACAGACAGAGGACCTCTTCGTGGAGATGCTGAAGGGGATTAAAAATGATGTAGTGAGTATGAACGAGAGACTGCCAGTGATTCCAACGATCGACAGACTGGACGACAATATTCCTGACATTGGTGTCGACATCACTGACACCATCACCAGCATAGAGCCAGATTGTTCACCACCAGAGGATAATGATCCTGAAATGGACACGATGCAGGTGATGGATGACATGGATTTGGCTGGTGGTGAGCAGGTTGTCAGCCAAGAAGAGATCCATCACCAGGAAGAGCTGGAGATAACAGAGATAGATCCACTGGAGGAAGAGGCAGTGCGAATGACCAGCAGTGACATAACTCAGGAAGCTGTTGGAATAGTTGGTGATCAGATATCAATGCACCTCGAGGGAGACATGACAGTTGTAGAACATCTGGGTATAAATTACGTGACAGCCATTGATTCGCCGAATGAAGAGCAAATTGTCCACTACTGCAGCAACGTTGATCTCCAGGAGGTCAAGGGTGATTACCTGGATGACAGATTGACAGTTGATGCAAACGTCACAACTGACGATTCATTTCCCCCGGATCAGTCCGAGGGGTTGACGAATGGAGACATCACGGCAATCAGTGAAACTGAAATAGCATCGACCAGTGATTCCTCGAAGAATTCCACTGCCAGAGAGTACACTAAACACAAGAAACACAATCTCCTTCGAACAGCTTTGAATAATCCCACCATCGATGAGACTGGAACGAGCTGGTACGTCTGTCCATTCTGCAATGAAGCTGCCACAGAGCCCAACAATCTTGCTGAACACTTCAAGCAGCATTTTTACTCCTGCACCTGCAGTCTTCTCTTCATCAACGTTGAGGATTTAAATAGCCACAAGGAGAAGGGCTGTAAACCGAAGAAGAGGAAGGAGTCGATGaataaatcagaaaaaatgaagagccAGCAGGAAGTGAGTGAGGAGTCAGTATTGTCCACGGAGGAGAGCAAAAAATCACCGAACAATGTCAGACAGAAGTGGACGCCAAAGGTGTGCGCCCAGTGTGGCAAGCAGTATCGAACTAATTATAAATTACAGGAGCACATGAGAAAACACACCGGGGAAAAACCTTTTCAGTGTCTCCTGTGTGATAAAGCATTCAGGAGTAAAATTGGTCTTGCTCAGCACACAGCAACTCACACAGGACAATTTGATTACAGCTGTTCAACCTGTGGCAAGGGCTTCCAGTGCAAGAGTTATCTCATTGTTCATCAGAGGGTTCACTCCGATCTCAAGCCCTATCCCTGCAACACCTGCGGACAAAATTTCAAGACGAAACAGTCGTTGCTCGATCATCAGAACAGGCACCTCGGTGTCAAGCCTTATGTCTGTGAAATCTGTGGAAGGGGATTTATCACCAAGGGACTGTGCAAGAGCCATCAGAAGATCCACTCGGGGATGGACAATCGTCAGTATCCCTGCGAGGTGTGCAATAAAATGTTCGTCAGCAAAAGTTATCTCAATACGCATTTGAGAATTCATACCGGTGAAAAACCCTATCTCTGCGAAGTCTGTGGTAAAGGATTTCTCACGCGAgtcgatttgaaaattcattcgacaATGCACACTGGGGAGAAGAGCTTCAAATGTGAAATTTGTAATAAAGTATTCGCTAGGAGGGCTGCCCTCAGGTGTCACAGGCGATCACACACCGGGGAGAGGCCTTACAGGTGTGATGTTTGTGGTAAAACTTTTACACAATTCAGTCCAATGGCTATTCACAAGAGACTCCACACTGGTGAAAGACCTTACGAGTGTGATGTGTGTGGCAAGGCATTTGTATCCAGGTCCACCATGATGTGCCACAGGAAGAGACATCCACCACAGACTGGggataaaattattggtatTGAAAATGCCATCACCGTCCTAGAAACTCATGACGGATTAGTCATTGGGAATTGA
Protein Sequence: MSVVDEFDYLCRLCATKTEILVGLPIFEHGENLRNIDKKITECLPIRVLMTDELPKVVCEQCAYKLDDIMDFREKCRQTEDLFVEMLKGIKNDVVSMNERLPVIPTIDRLDDNIPDIGVDITDTITSIEPDCSPPEDNDPEMDTMQVMDDMDLAGGEQVVSQEEIHHQEELEITEIDPLEEEAVRMTSSDITQEAVGIVGDQISMHLEGDMTVVEHLGINYVTAIDSPNEEQIVHYCSNVDLQEVKGDYLDDRLTVDANVTTDDSFPPDQSEGLTNGDITAISETEIASTSDSSKNSTAREYTKHKKHNLLRTALNNPTIDETGTSWYVCPFCNEAATEPNNLAEHFKQHFYSCTCSLLFINVEDLNSHKEKGCKPKKRKESMNKSEKMKSQQEVSEESVLSTEESKKSPNNVRQKWTPKVCAQCGKQYRTNYKLQEHMRKHTGEKPFQCLLCDKAFRSKIGLAQHTATHTGQFDYSCSTCGKGFQCKSYLIVHQRVHSDLKPYPCNTCGQNFKTKQSLLDHQNRHLGVKPYVCEICGRGFITKGLCKSHQKIHSGMDNRQYPCEVCNKMFVSKSYLNTHLRIHTGEKPYLCEVCGKGFLTRVDLKIHSTMHTGEKSFKCEICNKVFARRAALRCHRRSHTGERPYRCDVCGKTFTQFSPMAIHKRLHTGERPYECDVCGKAFVSRSTMMCHRKRHPPQTGDKIIGIENAITVLETHDGLVIGN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -