Basic Information

Insect: Fopius arisanus
Gene Symbol: -
Assembly: GCA_000806365.1
Location: NW:725647-734622[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.13 8.9 6.2 5.6 1 23 415 437 415 437 0.98

2 18 3.5 2.4e+02 1.7 3.8 1 21 443 463 443 466 0.95

3 18 0.00012 0.0082 15.8 0.8 2 19 473 490 472 494 0.90

4 18 3e-05 0.002 17.7 4.6 1 23 500 522 500 522 0.99

5 18 0.00083 0.056 13.1 0.1 3 23 530 551 528 551 0.92

6 18 0.67 46 4.0 1.2 1 23 558 581 558 581 0.97

7 18 3.6e-06 0.00024 20.6 0.5 1 23 585 607 585 607 0.97

8 18 0.00095 0.064 13.0 0.5 1 23 613 635 613 635 0.98

9 18 2.6e-05 0.0018 17.9 2.0 1 23 641 663 641 663 0.97

10 18 3.8e-06 0.00026 20.5 2.7 1 23 668 690 668 690 0.96

11 18 9.1e-05 0.0062 16.2 0.5 1 23 1277 1299 1277 1299 0.98

12 18 0.013 0.85 9.4 0.8 1 23 1305 1327 1305 1327 0.99

13 18 6.2e-05 0.0042 16.7 0.2 2 23 1334 1355 1333 1355 0.97

14 18 0.0056 0.38 10.5 2.9 2 23 1362 1384 1361 1384 0.92

15 18 5e-06 0.00034 20.1 1.4 1 23 1388 1410 1388 1410 0.98

16 18 0.21 14 5.6 1.4 1 23 1415 1437 1415 1437 0.97

17 18 4.9e-08 3.3e-06 26.5 0.2 1 23 1443 1465 1443 1465 0.98

18 18 5.9e-05 0.004 16.8 1.3 1 21 1470 1490 1470 1491 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.13	8.9	6.2	5.6	1	23	415	437	415	437	0.98
2	18	3.5	2.4e+02	1.7	3.8	1	21	443	463	443	466	0.95
3	18	0.00012	0.0082	15.8	0.8	2	19	473	490	472	494	0.90
4	18	3e-05	0.002	17.7	4.6	1	23	500	522	500	522	0.99
5	18	0.00083	0.056	13.1	0.1	3	23	530	551	528	551	0.92
6	18	0.67	46	4.0	1.2	1	23	558	581	558	581	0.97
7	18	3.6e-06	0.00024	20.6	0.5	1	23	585	607	585	607	0.97
8	18	0.00095	0.064	13.0	0.5	1	23	613	635	613	635	0.98
9	18	2.6e-05	0.0018	17.9	2.0	1	23	641	663	641	663	0.97
10	18	3.8e-06	0.00026	20.5	2.7	1	23	668	690	668	690	0.96
11	18	9.1e-05	0.0062	16.2	0.5	1	23	1277	1299	1277	1299	0.98
12	18	0.013	0.85	9.4	0.8	1	23	1305	1327	1305	1327	0.99
13	18	6.2e-05	0.0042	16.7	0.2	2	23	1334	1355	1333	1355	0.97
14	18	0.0056	0.38	10.5	2.9	2	23	1362	1384	1361	1384	0.92
15	18	5e-06	0.00034	20.1	1.4	1	23	1388	1410	1388	1410	0.98
16	18	0.21	14	5.6	1.4	1	23	1415	1437	1415	1437	0.97
17	18	4.9e-08	3.3e-06	26.5	0.2	1	23	1443	1465	1443	1465	0.98
18	18	5.9e-05	0.004	16.8	1.3	1	21	1470	1490	1470	1491	0.95

Sequence Information

Coding Sequence: ATGGACGAGAATGTTGGTGGTGAAGCTCAGGTTTGCCGTTTGTGTGGCCAATTTGAGAGTATTTACATCGATGTTTTTGGTGATGAGGGAACGAGGCGACTCCTCGGCCTCAAAATACATTCGAGGATCAACATTTtgATAGATGAGACGGATCCTCTTCCAAAGACGATCTGCGTTCAATGTCTGGGAAAACTCGAATTTGTGTGTGACTTTCAAGAGGAGTGTCTACGTACTCAACGACTGTTGCGCGATCGTTATCATCTACCACCTTTGCCAGACCTCGACTCCACTCTCTTTCCCGTGGAAATAAAACCGGAGGATCCGCCACCGACGCCGGACTCCCCGTCCACCTCCACGAACAACAAcagcactgaaaaaaatctcaacgcGACAGCGGACATCGAGAATGTCGATCCCTCACCGGATAGTAACACAACAGCTCCAGTCGAGGAGCCGCGTCCAAAACGGAACCTCCGTCCACCTCAGAACCGGTCAAAATCCCCGGAGAAGTCACCAAATGACTCGACAATCGCGCCCGCCTCCACCCGCCGATGGCTGCGGAGCCGAAACACAACGGAAacatcaaaaaatgaaaaatcaaagccGAAGCGCTCGTCGACAAAACCGCGGGTTCCGCGGACGTCAGTCTCCCGAGTCACGCGATTACGATCCCAAAATTCCCAGAAGACGCGATCGAGCGTGAGCCCGACCCCGGGTAAATCACCACCGGTCGAGTCATCCTCCGAGCAAAAGCAGACGATTCAAATTCCGACTTCAGCCCTGAACAAGGTCCTCACCGCAGTCTCAGGCTCGTCGGACGTCGAAGTGTGCGTGAAGGAGTCAAAAGGTCGAAACGGTGATATCGAGGACATCAGCTTTACCCTCGAGATGCGAAAGAAACTCGAGGAGACGGAGAACGTCGTGACAGTTCTCGCTAAAGTATTTCCAGATCAGGGCTCATGCCTGGTGGACTCGGAGATCGTTGATCTCCTCGGTGATAACGGCAATGCCGAGATCAACAAGATCATGACATCGGTATCCAAATCAAAAACATCGAGAGACAAGGATAAGGACGGCAGGCTAAAGCTCCAGGAGCTCGAGAAGAGGCTCTCCTCGATGTCGGATGGTGCGGACGGTGGTGGCAGTGAGTCCCGCAATCCAGAGGATCTATTCCGAATGGATGGCGAGGAGATTCGGGTCGACGATAACGTCGTCAGTGGTACATTGGACGGACAGCACGGCTACACCTGCAAATTATGCAAGAAATTCTACGAGCGACGAGACAAGTGCATGGTACACGTAAAAACACATCTAGGTATCAAGCAATACGCGTGCACCTTGTGCACCGCAAAATTTGTCTGCAAGAGCGATGTGATGAAGCACATCCGCTGCTCGCACACCAATCCAAGACCGATGCAGTGCCCGAAGTGTCCAAAAAGGTTTCGCTCCAAGTTCGACCTGACGGAGCACGATAACGTCCACAAGGGCATCAGACCGTACAAATGCAATGACTGCGGACAGAGCTATCATCATAAAGTGTCACTGCAGATGCACATCAAGTCGCACCTACCGCCTCAAAATCTAGCGTGTGAATACTGCGGAAAGGTTTTTCCTTTTAGGACTAGATTGCTCAGTCACATTGGCAGTGTTCATCTTAAAAATCGACGCAACTTTCGATGCAGATTCTGTTACAATCTTTACTCGAGTCTTGCTGTTCTCAATGAGCACATCAAGACACGTCACTCTACCACGTACACCTGCGATATCTGTGGGAAGACATTCAAAGTTGCCAGCAAGTACAAAGCGCATGTTCTTCAGCACTCCAATCCAAAGCCCTTTGTATGtaatatttgtaataataagTACGCGTCTAAGGCATTTTTGAATGAACACCTGTTGAAGCACGAGGGACTGCGAAAACACGTGTGCCAAAAATGTGGAGCTAGTTTTGCTCAGGCGAGTCATCTTGCTGCTCATAGGCATGTTCATGGGGAGAAGACTCATGCGTGTCCGGAGTGtgggagaaaattcaataggaGGGATAACATGAAGGTGCATAGGAAGAGGCATTTCGCGGAGACTGGGAGAATTGTCAGTGGACAGAAGAGTAAGGACGACGAGGGGCTCGAGGAGGGGGATAAGGATGTCAATGAGAAGGTCTGGGGAATCACCTGGGGGTGTGGGAAATTCTTCGGCCTTGAGGCAGGTGATCTTGTCGAGGATTTGTTTACTTCAGGGTTGGTGATAATCGTATTGCTCCAGAGGATGATTAAAGAGGATGACCAGCTGCCGAAGATCGTCTGCATCAGGTGCGTGGGAACGTTGGAGTTCCTCTGTGATTTCGTAGACCAGTGCCAGGAGACGCAGGAGAAACTCAAAGAGAAgGATGACGCCAACACCCCAGCCCCACCCCCAGATACCAACGACTTCAACAAGGAAAACATCAGGTCTTCGAGACACAAGTCCCTTTCGCCCCCATCCTCTCGGAGACCTAGAGCACCTGCGGATTTCCCTTCCCAAGATCTGGAGAATGTTACCCCATCATCCGGAGCATCTCCAGACATTTCTGAGAATATTCTCTCGGAGATTCTACATACGAGAAACAAAAGGGCTCATTCTCGGAAGCAATATCCAAAGATACGGAATATCACTAGCTTGAGGGAAGCTCTGAAGACAACCGGTCCGACGTCCCTGAAGAGACCCTCCGCCAAATCTGTGTCGAATCCTGaggagaagataaaaaaaattgaaagtgtGATTGACAGGACGATTTCTGGTGTGACTCCTCGGTCCAGGACCCCGAAGATTCGTTTTTCACTTCAGAAATTTATCCATGACCCTGAGGAATCATCTTCAGTTCTTGAACCTCCggagacaataaaaattccaaagaaacTCGAGAAAAGCGATACTAAACTGGATTCACCACCCGATCCATCTCCTCGGGAAGCTGTCGAAGAAGTTTCTGAACAACCGATCGAACAACCGCTCAAAGAAAGTGCGATGTCGCCGCCATTAGGAGCTCTCACCGCTCAAGAATCAAATGGACCATcagaaatctcgaaatcatctCCGGGagctgaagaaaaattttcagaagtCGGCCCTGAAGACCAAAAATTCCATGAGAGCACACGGAAGTCGCAGAAATCTACGGAATTATTAATCGCTGAAGACGAGGGTTTGAGCAAGAAATCTCCGCAATTTAACGACTCGAAGACTAAAAAGTCAAAGACAGCATCACCGAGGGTGTCCAGATCGCCGTCTGAACCTCATCTCCAGAGCGATGCATCCGACCCTCCATCCCGCACCCGGACTCCCCCAGAAGATATCCTGAAGAAAAACACACGTTCCTTGTCATCGCCACCTCCGTCTTCCGGTCAAAAGACTCGTAACTCACAATCCTCGAATGCTTCAGAGTCATTGAAACCCCGGCGTCGTCGAAGGTCATCCTCGGAGTCATCCTCGTGCTCGTCAGTGCCGACCTCGACCTCCTCCACCTCGAAACGCCGTAAATCAGGTGCCATTTACGGTACCGTTTCTCAACTGATCTCCTCCGAGGAGAAGGAAACGATCGAAAAATTCTACACCATTGACATGTCCGTCGTGGACGAGTCCGTCGTCGAAAAGAATTTGACGTACCTCGACAAGAAGCGAACCATGTGCCTCATCTGCAGTGCGCTCTACCCCAGAATTGATAAATGCAAAGTGCACATTTGGGGTCACCTTGAGATGAAGCCGTACAAGTGCACAGCATGCGATTTCTCGACACTCACAGTCACCAACATTAGGTGTCACATAAGGAAGAGTCACCTGAAGATCAAGCCCTTCGAGTGCAACTTCTGCAAGAAACGATATGTTACAGCAATTCTCCTCGAGGAGCACCTGAACACTCACAGTGGACTGAGGCCCTTCAAATGCACCGTCTGCCCCTTCTCGAGTGCCTCGAGACAAGTTCTGAGCTATCACATGACCACTCACAAACCAGTCAAGGACGTCACCTGTGACATATGCggcaaagaatttttttcgagaggtCGTATGCGCGCACACATGATCACTCACAACAAAAATCGTGAGCTCATGTGCAAGTTCTGCTCCCACCACTTCAGCTCAGCTGAGGCACTCCAGAAACATCTAGATAATCTTCACTCGAGTGATTACGTGTGCGATATATGTGGTAAGTCCACCAAGAGTCGGAAAGCTCTTCATAATCATCAGAATGTTCATTCCGAGGCGAAGTTCAAGTGCAACTTGTGCCCAAATGTTTATAAGAGTGGTCACATACTCAAGGAGCATTTGCTCAAACACGAGGGCATACGCAAGTACAAGTGCGAGGTGTGTGATAAGGCTTTTGCACAGCAGAGCCATCTTGCCGCTCATATGGCTGTTCACAGTGAGAAGAGATTCAAGTGTCCTGGGTGTCAGAGGGCCTTCAATAGACATGACAACATGAAGATTCATACAAAACGGTGTAGCATGTTCAAGGCCAATCCTCAGCTTCAGGACATGCTGCATATGAGGGTTAAAGGGCCCAAGGTCGCTCGGCTCGACGAGGCGGAGGGGATGAGTCATGTGATTGGTAAGGGGGAGGAGATAACTCATACCATTGGCAATGGGGAGGGGATGATTCAGACGAATGGCAGCGACGAGGGGAGGGAGGAGGTTCATGAAGTCGATCAGGTCGATCAGGTCATCAGGAAGGGCACCTTCAGCATCGGACAGGTTGTCGTCATTCCGTTCACCGGGGGAACCGTTGAGGAGTGCAGGGTTAAGGAGGCCGTGGCTGTTACGGAGAATGTCATTGGTCTCGAATGCTtttga
Protein Sequence: MDENVGGEAQVCRLCGQFESIYIDVFGDEGTRRLLGLKIHSRINILIDETDPLPKTICVQCLGKLEFVCDFQEECLRTQRLLRDRYHLPPLPDLDSTLFPVEIKPEDPPPTPDSPSTSTNNNSTEKNLNATADIENVDPSPDSNTTAPVEEPRPKRNLRPPQNRSKSPEKSPNDSTIAPASTRRWLRSRNTTETSKNEKSKPKRSSTKPRVPRTSVSRVTRLRSQNSQKTRSSVSPTPGKSPPVESSSEQKQTIQIPTSALNKVLTAVSGSSDVEVCVKESKGRNGDIEDISFTLEMRKKLEETENVVTVLAKVFPDQGSCLVDSEIVDLLGDNGNAEINKIMTSVSKSKTSRDKDKDGRLKLQELEKRLSSMSDGADGGGSESRNPEDLFRMDGEEIRVDDNVVSGTLDGQHGYTCKLCKKFYERRDKCMVHVKTHLGIKQYACTLCTAKFVCKSDVMKHIRCSHTNPRPMQCPKCPKRFRSKFDLTEHDNVHKGIRPYKCNDCGQSYHHKVSLQMHIKSHLPPQNLACEYCGKVFPFRTRLLSHIGSVHLKNRRNFRCRFCYNLYSSLAVLNEHIKTRHSTTYTCDICGKTFKVASKYKAHVLQHSNPKPFVCNICNNKYASKAFLNEHLLKHEGLRKHVCQKCGASFAQASHLAAHRHVHGEKTHACPECGRKFNRRDNMKVHRKRHFAETGRIVSGQKSKDDEGLEEGDKDVNEKVWGITWGCGKFFGLEAGDLVEDLFTSGLVIIVLLQRMIKEDDQLPKIVCIRCVGTLEFLCDFVDQCQETQEKLKEKDDANTPAPPPDTNDFNKENIRSSRHKSLSPPSSRRPRAPADFPSQDLENVTPSSGASPDISENILSEILHTRNKRAHSRKQYPKIRNITSLREALKTTGPTSLKRPSAKSVSNPEEKIKKIESVIDRTISGVTPRSRTPKIRFSLQKFIHDPEESSSVLEPPETIKIPKKLEKSDTKLDSPPDPSPREAVEEVSEQPIEQPLKESAMSPPLGALTAQESNGPSEISKSSPGAEEKFSEVGPEDQKFHESTRKSQKSTELLIAEDEGLSKKSPQFNDSKTKKSKTASPRVSRSPSEPHLQSDASDPPSRTRTPPEDILKKNTRSLSSPPPSSGQKTRNSQSSNASESLKPRRRRRSSSESSSCSSVPTSTSSTSKRRKSGAIYGTVSQLISSEEKETIEKFYTIDMSVVDESVVEKNLTYLDKKRTMCLICSALYPRIDKCKVHIWGHLEMKPYKCTACDFSTLTVTNIRCHIRKSHLKIKPFECNFCKKRYVTAILLEEHLNTHSGLRPFKCTVCPFSSASRQVLSYHMTTHKPVKDVTCDICGKEFFSRGRMRAHMITHNKNRELMCKFCSHHFSSAEALQKHLDNLHSSDYVCDICGKSTKSRKALHNHQNVHSEAKFKCNLCPNVYKSGHILKEHLLKHEGIRKYKCEVCDKAFAQQSHLAAHMAVHSEKRFKCPGCQRAFNRHDNMKIHTKRCSMFKANPQLQDMLHMRVKGPKVARLDEAEGMSHVIGKGEEITHTIGNGEGMIQTNGSDEGREEVHEVDQVDQVIRKGTFSIGQVVVIPFTGGTVEECRVKEAVAVTENVIGLECF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -