Fari005679.1
Basic Information
- Insect
- Fopius arisanus
- Gene Symbol
- bab1
- Assembly
- GCA_000806365.1
- Location
- NW:736058-944843[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-17 1.5e-14 52.6 0.0 1 43 383 426 383 428 0.95 2 2 2.3 2.9e+03 -2.7 1.3 6 15 504 513 502 516 0.88
Sequence Information
- Coding Sequence
- ATGACGCAGCAGAGCGGGGCGGGTTCACCCCAGCAATTCTGTTTGCGATGGAACAATTATCAGACAAATCTCACTAATGTCTTTGATCAATTGCTCCAGAGTGAGTCATTTGTCGATGTAACACTGGCTTGCGACGGTCACTCAGTGAAAGCCCACAAGATGGTACTATCAGCTTGTTCACCCTATTTTCAGGCACTCTTCTTTGAAAATCCGTGTACCCATCCAATAGTCATAATGAAGGACATCAAGTGGCCAGAGTTGAAGGCAGCTGTTGAGTTCATGTACAAGGGCGAGATAAATGTCTCTCAAGAGCAGATTGGACCGTTGCTTAAAGTGGCTGAATGCCTCAAGATCAGAGGACTTGCGGATGTCAATAGTGAGCAAGAGCTTGTGTCAAGACCTAGTATGCTTGACAATTTAGCATCACTTGGTAGTGGTTCACAAAGTCGTAAAAAGCGTCGTCGTGCATCGGGTGATCGTTCACCAAGTGTTAACAGTCCTGATCAAAATTCCTGCATTATAGATGATCAGGAGGTGATCGGTTTGCCAGATGTTCACAATCTCGTGGCATCGTCTACACCGAGATCCATCGGCTCACCATCCTCAGCCCCAAGTATCTCAGTTACACCTCAAATTAATCTTCAGGAGCTTCCTGTATCGTTGCCATTGCCACCACCACAATCACAATCCAATCAGAGCGCTCACTCTGTTGGTCACCACGTGACAAGCCACGTGACAAGTGCTGGACATCCTAGTGTCAATCATCTTGGACAGCATGTGCAGGGTTTGACGGTGCAGCAGCATCAGGCACAGGCACAGCAAGCAGCTGTTGCACAGCATCAGGCGCAGCATCAGGCACAGCAGCAAGCTGCAGCAGCTGTTCAGCATCATCAACAGGCGGTCGGTAATCAGTCGACGCCAGTCGATGATCTCGAGATCAAGCCGGGGATTGCTGAGATGATTCGGGAGGAGGAAAGGgCCAAGTTGTTGGAGTCTTCCCATGCTTGGCTCGGTGCCTCCACCTCCAATATATCAGCAGACAGCTACCAGTATCAGCTCCAATCGCTCTGGCAAAAATGCTGGAACACAAATTCGGGACTTGTTCATAATCTACGCTTTCGGGAACGTGGACCACTGAAGTCTTGGAGGCCCGAGACCATGGCCGAGGCGATCTTCAGTGTTCTGAAGGAGGGACTATCATTGAGTCAAGCAGCTAGaaaatacgATATTCCATATCCAACATTCGTCCTCTACGCGAATCGTGTCCACAACATGCTAGGACCGAGCTCCGATGGCGGGGCCGGTGAGTATCTACGACCAAAGGGACGGGGAAGACCCCAGAGGATTCTCCTCGGTGTGTGGCCAGACGAGCACATCCGTGGTGTTATCAGGGCTGTTGTATTCCGTGACGGCTCCATCGTCAAGGACGAACCAAATCCAATGTACCCCAGCCTGGCGAATTACGCGTGCAATGGGCCAGAGGGGGCGGTAAGCCCTGGTGCTGCTGCGGCTGCTGCGGTTGCTGCGGTCGCCCAAGGCCTTCGACACCAAATGTGCAGCATGGTAGCAGCAGCACAGTCCCACCAGCACGACATGATAGCTACAAATCTATCAGCAAACTTCCAAGCAGCTGTTCAAGTTAATCAGCACCATCTCAATAACAACAGCGGCTCGAGTAATAACAACAATACTAATAACAATAATCGTAATTCACCGTTGATACTGGGACTGCCAAGTCCTGGATCGGGTGGACCACCGGAGAGTCCAATGGAGGGAAGTCCATTGGCAAGTCCTTTGGCACCATTGATGGATCCAGCTCACATCCCCAGTAGCGTTGAAGTTGGAATTGGTGTCAGTGGTATGACGTACAAACCCCAGCGTAGCTATGTCAGTCCAAGACCCGAGAATATGTTCCAGGAGGATATATCTGATCTCGTTAAGAGTTCACATGGCcacaaggacaaggacaaaGTGCCAGTTAAGATTGAACCATTGACTGATTCCAGAAGCGAGCAGTAA
- Protein Sequence
- MTQQSGAGSPQQFCLRWNNYQTNLTNVFDQLLQSESFVDVTLACDGHSVKAHKMVLSACSPYFQALFFENPCTHPIVIMKDIKWPELKAAVEFMYKGEINVSQEQIGPLLKVAECLKIRGLADVNSEQELVSRPSMLDNLASLGSGSQSRKKRRRASGDRSPSVNSPDQNSCIIDDQEVIGLPDVHNLVASSTPRSIGSPSSAPSISVTPQINLQELPVSLPLPPPQSQSNQSAHSVGHHVTSHVTSAGHPSVNHLGQHVQGLTVQQHQAQAQQAAVAQHQAQHQAQQQAAAAVQHHQQAVGNQSTPVDDLEIKPGIAEMIREEERAKLLESSHAWLGASTSNISADSYQYQLQSLWQKCWNTNSGLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSSDGGAGEYLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGSIVKDEPNPMYPSLANYACNGPEGAVSPGAAAAAAVAAVAQGLRHQMCSMVAAAQSHQHDMIATNLSANFQAAVQVNQHHLNNNSGSSNNNNTNNNNRNSPLILGLPSPGSGGPPESPMEGSPLASPLAPLMDPAHIPSSVEVGIGVSGMTYKPQRSYVSPRPENMFQEDISDLVKSSHGHKDKDKVPVKIEPLTDSRSEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00317550;
- 90% Identity
- iTF_00437999;
- 80% Identity
- iTF_00728740;