Fari001330.1
Basic Information
- Insect
- Fopius arisanus
- Gene Symbol
- KBTBD4
- Assembly
- GCA_000806365.1
- Location
- NW:183273-186805[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.0017 2.1 7.3 0.0 27 38 222 234 201 240 0.77 2 4 6.5e-12 8.2e-09 34.2 0.0 5 39 251 284 249 289 0.88 3 4 0.03 38 3.3 0.0 21 34 318 331 304 336 0.82 4 4 8e-14 1e-10 40.3 0.1 4 41 362 399 359 402 0.91
Sequence Information
- Coding Sequence
- ATGTCAGAACTATCAAGTGAATCTCTGAGTGATCAAGACTACTCCTTCAAATGGAGCGATTATCAAAATCATCTGTCGACGGTTGTCAGAGAATTACTAGAGGAGGATTGCATGGTAGATGTAACGCTATGTGTTGCTGGAGAACGCATCCATGCACATCGTATTGTCCTATGCGCCTGCAGTACCTTATTCCAAGAAATTCTGAGTGAAACAATGGAAGATCATCCTATCATAATTATCAGTGACATATCAGCAAATGATGTCAGATCTATTGTGGAGTTCTCGTATCATGGAGAAGTTAGAATACCTGTGGAgaatatttctaatttattGGAGGCTGCACAGCTATTGAGAATAAATGGATTAATGGAGATTGAAGGACTCGATGAGCATGAACCTATTGTCAGCAAGGAGCTAACAGAGGAAATTAgtaatctggaaaattcatcagatAACGATGGGCGAGAGATGTTGAATGCAATTGAAGGAGACAGTGAATTACACGAGGACGTTGACCTCGATGACGATAATTCCAttgagagaaagaggagaggaaagaaaaagaggGATTACCCGAAGAAGGAGTACAGCGAAGTCATGCTGGAGACAGCTATAAGTGACTtaaagaatggaaaaacttTGATTGAAGCTTCTATGAGCAATAATATTCCGAGGTCGACACTCTACATGAGAGCCAAGGCACTTGGCATTCAGTTGCATGCAGCGAGAAATGAATATCCCATCGAATGTATGAAATCTGCCATCGAGACGGTTCTCaATGGTGCAAGTTTGCAACATGCCTCTGAAATGTACGGTATACCAAAGACTGTTCTTTGGAGGCGTATACAGAAAGAAGGATATCAAATAGTTAGACCGGACATGAGGAGAGCATACGCCTCTGAAAAACGAGTTGCTGCTGTTAAAGCACTTGAGAGAGGTGAAAATCTTACAAAAGTCTCCAATGAGTTCAAAATACCGAAAACAACATTATTCAGAGACAAAGTAAAACTAGTGGATGAGGGAAAATTACCAGAATCGTTCTGGAAGCGACGAAAAACTGAAGATGAGGACTTGAAGAAAAGTAGACTCGAGAAAGCAGTTGCAGCTTGCAAAGGTGGTAAAATGTCGCAAGCTGCAGCAGCCACACTCTATGGAATTCCCAAAACCACGATTTGGAGGAAGTTACAACAGAAAAATAGGAAGAATGAGGATTGCTCCAGCTCCAGAGTTGCAAAGAAACAGAAAAAGAATGACAATACTTCTGAAATAAAGTCTGAAATGGCAGATGAGGACTTTTCTCTCTGTGAAgTGAGCTCAGAGATCCCTATAACGTACATCGACGAAGACAGCATTCCCCAGGATTCTGTAATAATTCTAACAACAGAAGATGTCGACAGTCTCAACTTGGAGGACAATCGTCAAATAATTGTCAACGCAgATTCTGGTCAGGAGTTTGTTCCCTGTACAATAAGCATAGAGGAGACAAAGTATTGTCCAGCTGAAAGTTAA
- Protein Sequence
- MSELSSESLSDQDYSFKWSDYQNHLSTVVRELLEEDCMVDVTLCVAGERIHAHRIVLCACSTLFQEILSETMEDHPIIIISDISANDVRSIVEFSYHGEVRIPVENISNLLEAAQLLRINGLMEIEGLDEHEPIVSKELTEEISNLENSSDNDGREMLNAIEGDSELHEDVDLDDDNSIERKRRGKKKRDYPKKEYSEVMLETAISDLKNGKTLIEASMSNNIPRSTLYMRAKALGIQLHAARNEYPIECMKSAIETVLNGASLQHASEMYGIPKTVLWRRIQKEGYQIVRPDMRRAYASEKRVAAVKALERGENLTKVSNEFKIPKTTLFRDKVKLVDEGKLPESFWKRRKTEDEDLKKSRLEKAVAACKGGKMSQAAAATLYGIPKTTIWRKLQQKNRKNEDCSSSRVAKKQKKNDNTSEIKSEMADEDFSLCEVSSEIPITYIDEDSIPQDSVIILTTEDVDSLNLEDNRQIIVNADSGQEFVPCTISIEETKYCPAES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00728753;
- 90% Identity
- iTF_00728753;
- 80% Identity
- iTF_00728753;