Fatl047155.1
Basic Information
- Insect
- Flexamia atlantica
- Gene Symbol
- grn
- Assembly
- GCA_035578135.1
- Location
- JAQJVK010000008.1:37332227-37337053[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.5 6e+04 -3.9 0.0 3 6 18 21 17 23 0.73 2 3 2.4e-19 3.2e-15 57.7 9.2 1 35 40 73 40 74 0.97 3 3 0.48 6.5e+03 -0.9 0.6 7 19 90 102 88 104 0.70
Sequence Information
- Coding Sequence
- ATGGCGATCGAGTGCAGATATCTCGGGGCAATGTGGGTCGATTGTCAACCGCACTGTGGGGCCGCTCCGGGCCTCCACTGGTCGCTGCAGTCGGCGGCGCGGCGCGCGGGCACGAGCTGCGCCAACTGCAAGACGACCACGACGACGCTGTGGCGGCGCAACCAGAACGGCGAGCCCGTCTGCAACGCCTGCGGTCTCTACTACAAACTGCACAACACCAACCTCCAACTCAACGCCATCGTGGTCATCACCCGAAGACCAACCTCCAACTCAACGCCATCGTGGTCATCACCCGAAGACCAACCTCCAACTCAACGCCATCGTGGTCATCACCCGGAGACCAGGATATTCCACATGTGTGCGAAGACCACGGAAGCCTTTCACACCGTATGA
- Protein Sequence
- MAIECRYLGAMWVDCQPHCGAAPGLHWSLQSAARRAGTSCANCKTTTTTLWRRNQNGEPVCNACGLYYKLHNTNLQLNAIVVITRRPTSNSTPSWSSPEDQPPTQRHRGHHPETRIFHMCAKTTEAFHTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -