Fatl055628.1
Basic Information
- Insect
- Flexamia atlantica
- Gene Symbol
- GATA4_1
- Assembly
- GCA_035578135.1
- Location
- JAQJVK010000011.1:18789588-18798454[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.8e-18 2.4e-14 54.9 3.2 1 34 41 73 41 75 0.97 2 3 8.9e-19 1.2e-14 55.9 4.0 1 35 95 128 95 129 0.98 3 3 2.7 3.6e+04 -3.2 0.2 3 9 173 179 172 181 0.76
Sequence Information
- Coding Sequence
- ATGGACCAAGTCTCTGTAGCGAAATCCATGGCATCCTCGTCACTTTCTGTGATAGCATATCATTTTACCAACTCGTTGCTGGGGTTGGAGGATGTGGAGTACTACAGCGAGGGCCGCGAGTGCGTCAACTGCGGCGCCATCTCCACGCCGCTGTGGCGCCGCGACGGCACCGGCCACTACCTCTGCAACGCCTGCGGCCTCTACCACAAGATGAACGGCATGAACCGTCCCCTCGTCCGCCAACCACGCCGGCTGTCGGCGTCGCGCCGCATCGGCCTGACGTGCAGCAACTGCAGCACCAGCACGACGTCCCTGTGGCGCCGCAACACCCTCGGCGAGCCGGTGTGCAACGCCTGCGGGCTCTACTTCAAACTGCACGGCGTCAACCGGCCCCTCACCATGAAGAAGGACAGCATACAGACCAGAAAACGGAAACCCAAGGGAGGATCGAAGAGTGATTTACCTAAGAGTGGACCCATCTCAGTCAAAATGGAGCACAACGAAAGCTACAACCAGGAGTGTCGCACGGGCACGACGGTGCTGAACCACACCCTGTCGTACAGCAGTCTGTACGGGGGCACGGGGGCCGGCGGGGCCAGCCTGGGGCAGTTCTACAACATGGCGGAGGCCAAGGCGGAGGCGACCGACGCCCACGGCTCCGACAGCCAACCTCACATCGTCAGTCTCGCCAGCACTAAGGCCGAGAGACCTAGCGTCGTCTCCATCATTTCCTAG
- Protein Sequence
- MDQVSVAKSMASSSLSVIAYHFTNSLLGLEDVEYYSEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVRQPRRLSASRRIGLTCSNCSTSTTSLWRRNTLGEPVCNACGLYFKLHGVNRPLTMKKDSIQTRKRKPKGGSKSDLPKSGPISVKMEHNESYNQECRTGTTVLNHTLSYSSLYGGTGAGGASLGQFYNMAEAKAEATDAHGSDSQPHIVSLASTKAERPSVVSIIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -