Fatl055639.1
Basic Information
- Insect
- Flexamia atlantica
- Gene Symbol
- pnr
- Assembly
- GCA_035578135.1
- Location
- JAQJVK010000011.1:18954918-18970386[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 1.1 1.4e+04 -1.9 0.2 7 13 108 114 107 118 0.82 2 6 4.1e-18 5.5e-14 53.8 3.2 1 34 141 173 141 175 0.97 3 6 9.6e-07 0.013 17.4 4.9 1 20 200 219 200 220 0.95 4 6 2.9e-05 0.38 12.7 7.7 1 20 230 249 230 250 0.95 5 6 2.4e-06 0.032 16.1 5.2 1 20 260 279 260 280 0.95 6 6 2.8e-19 3.8e-15 57.5 5.4 1 35 290 323 290 324 0.98
Sequence Information
- Coding Sequence
- ATGTTCCACGGCGCCGCGAGCGCCGCCCCCTCGGCCAACTACACCTCCGACTCCAACGCCTCAGGATTACCCATCATCCAAGGACCAGCCTCCAAGACCCCCACACTCATCCCACTCTCTCTTCCAGGATACTCGCAGCAGCCCGTGTACGTCCCCAGCAACCGCGTGTTCCAGTGGAACTCCCCTTACAACTCGTCCTCCGGGCAGAACTCCTCGGCATGGCACCCCCAGGGCTCGGGCCACGCCGCCCACGACCACTACCCCGGGGCCGCCCAGtcgcccgccgccgccgcccacTTCACCAACAGCTTCTACGCCGCCCAGACTACCATGATGTGGCGGACTTATGACCCTAGTTCCTTCCAGCGAGGTCTGCCTTACGAGGACGCGATGCAGTTCCAACTGGGGGAGGGCCGCGAGTGCGTTAACTGCGGCGCCATCTCGACGCCGCTGTGGCGCCGCGACGGCACCGGCCACTACCTCTGCAACGCCTGCGGCCTCTACCACAAGATGAACGGCATGAACCGGCCGCTGGTCAAGCCGGCCAAGCGGCTCGTCAGCCTCGGGcagacggCGTCGCGGCGCCTGGGCCTGTGCTGCACCAAATGCGGCACGCAGACCACGACACTGTGGCACCGCAACAACGACGGCGAGCCGcagacggCGTCGCGGCGCCTGGGCCTGTGCTgcaccaactgcggcacgcagACCACGACGCTGTGGTGCCGCAACAACGACGGCGAGCCGcagacggCGTCGCGGCGCCTGGGCCTGTGCTgcaccaactgcggcacgcagACCACGACACTGTGGAGCCGCAACAACGACGGCGAGCCGcagacggCGTCGCGGCGCCTGGGGCTGTGCTgcaccaactgcggcacgcagACCACGACGCTGTGGCGCCGCAACAACGACGGCGAGCCGGTCTGCAACGCGTGCGGCCTCTACTTCAAGCTGCACGGCGTCAACCGGCCGCTCGCCATGCGCAAGGACGGCATCCAGACGCGGAAGCGGAAGCCGAAGAAGTCGTCGGGGTCCGGCGGCGAGGCGATGCCGAGCACGAGCACCTCCAGCACGCCGGCGGGCGCCACCGAGCACAAGAGCTCCGCCGCCGCGGACCGCGAGGAGCGGCCGTACCTGGGCCACACCAGCCTCCTGCCCGCGGTCAAGAGCGAGCCCTACCCCGACCACGCGCCCCAGGACCCCTTCACCCCCTACTCGGCGGCGGCCTTCCAGCAGCAGCACCACCACCAGCTGGGCTTCGGCTTCCCCGGGGGGTCGACCGGCTCCGACcactaccaccaccaccaccaccaccaccaccacgcCAACACCGTGCACAAGCTGATGGCCACGAGCTAG
- Protein Sequence
- MFHGAASAAPSANYTSDSNASGLPIIQGPASKTPTLIPLSLPGYSQQPVYVPSNRVFQWNSPYNSSSGQNSSAWHPQGSGHAAHDHYPGAAQSPAAAAHFTNSFYAAQTTMMWRTYDPSSFQRGLPYEDAMQFQLGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKPAKRLVSLGQTASRRLGLCCTKCGTQTTTLWHRNNDGEPQTASRRLGLCCTNCGTQTTTLWCRNNDGEPQTASRRLGLCCTNCGTQTTTLWSRNNDGEPQTASRRLGLCCTNCGTQTTTLWRRNNDGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKSSGSGGEAMPSTSTSSTPAGATEHKSSAAADREERPYLGHTSLLPAVKSEPYPDHAPQDPFTPYSAAAFQQQHHHQLGFGFPGGSTGSDHYHHHHHHHHHANTVHKLMATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -