Fatl078328.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Flexamia atlantica
Gene Symbol
ZNF219
Assembly
GCA_035578135.1
Location
JAQJVK010000030.1:3381126-3386993[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 0.0097 1.2 11.9 2.5 1 23 554 576 554 576 0.98
2 12 8.5e-06 0.0011 21.6 0.5 1 23 582 604 582 604 0.96
3 12 0.00019 0.024 17.3 0.3 3 23 615 636 614 636 0.97
4 12 0.0036 0.47 13.3 5.1 1 23 642 664 642 664 0.96
5 12 9.2e-06 0.0012 21.5 0.4 1 21 670 690 670 691 0.95
6 12 9.1e-07 0.00012 24.6 0.7 1 23 698 720 698 720 0.96
7 12 0.0067 0.86 12.5 2.1 1 23 726 748 726 748 0.98
8 12 2.2e-07 2.8e-05 26.6 1.6 1 23 754 777 754 777 0.97
9 12 0.0025 0.32 13.8 0.9 1 23 783 805 783 805 0.99
10 12 0.0001 0.013 18.2 4.2 1 23 811 833 811 833 0.98
11 12 2.1 2.6e+02 4.6 1.9 2 23 841 860 840 860 0.79
12 12 0.00069 0.089 15.6 0.2 1 23 866 889 866 889 0.94

Sequence Information

Coding Sequence
ATGTCTTCTCCGGTTCCTCACGATCAAGCCAAGTCAGCTTGTGATGTTTCAAGTTTTCAAAACAAGTCATCACTAACAATGAATATGATGGATCCAATTCAAAGTTGGCTTAATCTTCCAATCCCATCACAGATTTCAAGTAACCAGCAATATTGCAAATATAGTGAAAGGTCAGTTCCAGTAGTATCTCAAAGCTATAATATCCCGATATCAGCAGCGACACAGATATCAGTGGCATCTCAAATTTGCCTTCCGATGTTCGACCAGTCAGATTTAAAGCAAAATGATATGTGTATGCAAAGTCCTGATACTTGCTTTGAGAGTATAAGTAACCCCACAAACAAACAAGTACCAAGTagtacaaaacaaaattcatttacGATTGACATAAAGCAAGCAACCATGCAAGATCAAAATGCTTTGATTTCAAAACAGGGTGCTTATCAAACCAGTGTTATGGCTAAGGATTGGAAAGCTCCATTCCAGAACTATATTTCAAGCCCAAATGTATTTAACACAATAAATGAACCTCAAGATAATTATGTGTTTGCGCAATACAGCATGCAGCCTTCAAATTCATACTACTCTGCTCAAGATAATAGTTATTCTACATTTGTCAATAAAAACCACAATTTCAATCCCCAGACAAAGTTGTCACATATCCGTGGTGAGAACTTACCCTCACAGCAAAATTCATTTACAAGTCAAGGACAAGCCAAGATAAATCAAAGTTCAAATTCTCAAAGTGTTGGTCAAACTCATAACATCCCAAATTCATTTTACCCCACCAAACAACTCTTGAAAGATGGAGGAAAGTTACAAACTATTCATAAAAACCAGGGCAGCAGATCTGAAGACAATTACAATGATTCTTTGAATGATTGTTGTCAAATTAATAAATCACAAGTACCAGAACTTAATTCTGGTTTAAGTAGCTGTTTTCCATCAGTAACAAACAACCAAGAAAACAAACCTTCAGTACTACTAGAGGCAAGCAATCAAACTGACAAACGGGGTTTTAAAAGTTCTGAAACTGTCTCAAGTGAAAGTGATGAAAGTAACATCATTGTCGAAGAATCGGATGAAATAGGAGAAATTGAGAGTGAGATATCAATTGAAGAAATCAAGAAGAGTTATGAAGCCAATGGGAACCAAGTTCTTTTGAGGTGCTTGATATGTAATGTCACTACTTCCTCACAAACACCTGCCAACCAGTTTATCCATATGAATGAATCATTTCCTGTAACATCATCTTCAAAAATACCAATAAGGACTAAACTCGTGGAAATACTTCCTGTGGACTTCAAGCATTACCTCAAGAAACACAACAGTTTCATGTGTCGCCGTTGCCTCAACCTTGTTGAAACAGTTGAAATTCTTGAAGTTAAACTGTCTACAGCTAAACAGTCTCTtactgaaaaattttcaaagactGTTCAGCAATTCTTACCGAATTTAGATCACATTATACATGATAATGAAGTCAGTGCTCAAGATGTTGATCAGCTAttacaaaatgaaaacatttcaaaatcattaCCACAGGTAGAAAATGCAACAATACCCAAGCCTTTTGAGGAGCTAGAAGATCACTCAGATGAAAATGAATGTCCAAATGAAGAAAAAGCTCTTTCTACCAGTGATATTGAACAACCGGAATATCAGTGCTCTTATTGCTTCAAACTGTTATcatctcaaaaatatttgaacttgCATCTTCAGCAGCATACCAAAGATTTCTGTTACTATTGTGAAAAATGCGGCAAGGGCTTCCCATTGAAGTACAACCTTCAGAGACACCTCGATTGGCACAATAGTGAGGAGAAAGAGGCAGATATACTTTGTGAAGTTTGTGGTGAAATGTTTGTCACtagcaataattttaaaacccatCTACTAAAAGTACACTCCCAAGAATATATTCACAGGTGTAAGACCTGTGGAAAaggttttaccaaaaaaatatcACTCGAGATTCACAGCCACAAGCACACCGGTGCTCGTATGTTTATATGTGAATATTGTGGACACACTTTCGTGTCAGAATCGAACCTGAGGAATCATATAAAACTGTGCAACAAAGACTTTCTGTACACGTGTGAAGAATGTGGTAAAAGTTTCATCTCACAGAGCCAGTTATCGAGACACGAATCTCAGCACACAGGTATTTACAAGTTTTCGTGCACCGTTTGCAGCAAAGGTTTCCACAAACCTTCCGATCTCAATTTTCACATGTTGTCTCATTCTACCGATAAGCAATTCAAGTGTAAAGACTGTGACAAATCTTTTAAAACCAAAGGCAATCTAAACTACCATGTCAAAGTGGTTCATAAAGAAGAAACGATATTCAAATGTGATGTATGTGCTAAAAATTTCTTCCAGGAAAGGTTGTTGTCGGAACATGTTAAAACGCATGCCGGTGAAAAACCTTATAAATGTAATCAATGTGATAAAAGCTTTGTGCATCAGACATCGTTTTTTGCACATTCGAAGGTGCACCAAGGCAAGGTGAAGCTGAAAACTTGTGAAGTGTGCGGAAAGTCGATCAAGACTCGCATGAGCGTTCACATGAGAACACACACGGGAGAGAAGCCGTACAGCTGCATGTACTGTCCTCTGGCGTTCTCTGTCAGCGTCTCTCTCAAGAAACACATCTCCGCCAAACACgtcaacaataatattttataa
Protein Sequence
MSSPVPHDQAKSACDVSSFQNKSSLTMNMMDPIQSWLNLPIPSQISSNQQYCKYSERSVPVVSQSYNIPISAATQISVASQICLPMFDQSDLKQNDMCMQSPDTCFESISNPTNKQVPSSTKQNSFTIDIKQATMQDQNALISKQGAYQTSVMAKDWKAPFQNYISSPNVFNTINEPQDNYVFAQYSMQPSNSYYSAQDNSYSTFVNKNHNFNPQTKLSHIRGENLPSQQNSFTSQGQAKINQSSNSQSVGQTHNIPNSFYPTKQLLKDGGKLQTIHKNQGSRSEDNYNDSLNDCCQINKSQVPELNSGLSSCFPSVTNNQENKPSVLLEASNQTDKRGFKSSETVSSESDESNIIVEESDEIGEIESEISIEEIKKSYEANGNQVLLRCLICNVTTSSQTPANQFIHMNESFPVTSSSKIPIRTKLVEILPVDFKHYLKKHNSFMCRRCLNLVETVEILEVKLSTAKQSLTEKFSKTVQQFLPNLDHIIHDNEVSAQDVDQLLQNENISKSLPQVENATIPKPFEELEDHSDENECPNEEKALSTSDIEQPEYQCSYCFKLLSSQKYLNLHLQQHTKDFCYYCEKCGKGFPLKYNLQRHLDWHNSEEKEADILCEVCGEMFVTSNNFKTHLLKVHSQEYIHRCKTCGKGFTKKISLEIHSHKHTGARMFICEYCGHTFVSESNLRNHIKLCNKDFLYTCEECGKSFISQSQLSRHESQHTGIYKFSCTVCSKGFHKPSDLNFHMLSHSTDKQFKCKDCDKSFKTKGNLNYHVKVVHKEETIFKCDVCAKNFFQERLLSEHVKTHAGEKPYKCNQCDKSFVHQTSFFAHSKVHQGKVKLKTCEVCGKSIKTRMSVHMRTHTGEKPYSCMYCPLAFSVSVSLKKHISAKHVNNNIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
-
80% Identity
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