Basic Information

Insect: Flexamia atlantica
Gene Symbol: byn
Assembly: GCA_035578135.1
Location: JAQJVK010000022.1:1497469-1507860[+]

Transcription Factor Domain

TF Family: T-box
Domain: T-box domain
PFAM: PF00907
TF Group: Unclassified Structure
Description: The T-box encodes a 180 amino acid domain that binds to DNA. Genes encoding T-box proteins are found in a wide range of animals, but not in other kingdoms such as plants. Family members are all thought to bind to the DNA consensus sequence TCACACCT. they are found exclusively in the nucleus, and perform DNA-binding and transcriptional activation/repression roles. They are generally required for development of the specific tissues they are expressed in, and mutations in T-box genes are implicated in human conditions such as DiGeorge syndrome and X-linked cleft palate, which feature malformations [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 1.3e-06 0.0069 18.6 0.0 57 93 4 40 1 41 0.94

2 13 8.2e-06 0.043 16.0 0.1 59 93 40 74 38 75 0.94

3 13 0.00036 1.9 10.7 0.0 59 88 74 103 72 106 0.93

4 13 0.0082 43 6.2 0.0 61 89 108 136 103 145 0.90

5 13 5.2e-07 0.0027 19.9 0.0 52 93 143 184 137 185 0.89

6 13 0.00033 1.7 10.8 0.0 59 88 184 213 182 219 0.92

7 13 5.4e-07 0.0028 19.9 0.0 53 93 256 296 250 297 0.89

8 13 1.9e-05 0.098 14.8 0.1 59 94 296 330 294 332 0.90

9 13 0.00024 1.3 11.2 0.0 58 89 330 361 328 368 0.91

10 13 5.2e-07 0.0027 19.9 0.0 52 93 368 409 362 410 0.89

11 13 3.6e-06 0.019 17.2 0.1 59 98 409 447 406 448 0.90

12 13 0.0071 37 6.4 0.0 58 85 443 470 441 471 0.92

13 13 1.4e-44 7e-41 142.4 0.0 58 181 470 587 467 588 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	1.3e-06	0.0069	18.6	0.0	57	93	4	40	1	41	0.94
2	13	8.2e-06	0.043	16.0	0.1	59	93	40	74	38	75	0.94
3	13	0.00036	1.9	10.7	0.0	59	88	74	103	72	106	0.93
4	13	0.0082	43	6.2	0.0	61	89	108	136	103	145	0.90
5	13	5.2e-07	0.0027	19.9	0.0	52	93	143	184	137	185	0.89
6	13	0.00033	1.7	10.8	0.0	59	88	184	213	182	219	0.92
7	13	5.4e-07	0.0028	19.9	0.0	53	93	256	296	250	297	0.89
8	13	1.9e-05	0.098	14.8	0.1	59	94	296	330	294	332	0.90
9	13	0.00024	1.3	11.2	0.0	58	89	330	361	328	368	0.91
10	13	5.2e-07	0.0027	19.9	0.0	52	93	368	409	362	410	0.89
11	13	3.6e-06	0.019	17.2	0.1	59	98	409	447	406	448	0.90
12	13	0.0071	37	6.4	0.0	58	85	443	470	441	471	0.92
13	13	1.4e-44	7e-41	142.4	0.0	58	181	470	587	467	588	0.94

Sequence Information

Coding Sequence: ATGTGTCTGTGTAGGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCTGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAGCTTGGGCCACTGGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCGGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAACTTGGGCCACTGGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCGGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAACTTGGAGCCACTGTACGTGAACGGGGATTGGGTGCCTGGGGGCAAGGCGGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAACTTGGAGCCACTGGTTAACTCAGTCACAATGTGTCTGTGTAGGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCTGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAGCTTGGGCCACTGGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCGGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAACTTGGAGCCACTGGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCGGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAACTTGGGCCACTGGTTAACTCAGTCACAATGTGTCTGTGTAGGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCGGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAGCTTGGGCCACTGGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCTGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAGCTTGGGCCACTGGATGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCTGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAACTTGGAGCCACTGGTTAACTCAGTCACAATGTGTCTGTGTAGGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCTGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAGCTTGGGCCACTGGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCGGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAACTTGGGCCACTGGATGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCTGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCGGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCAGAGTCGCCCAACTTTGGGGCTCATTGGATGAAGGAGTCTGTATCCTTTGCCAAGGTCAAGCTGACCAATAAGACCAACGGCAGCGGACAGATAATGCTGAACTCGCTGCACAAGTACGAGCCGCGGGTGCACATCGTGAGGGTGGGGGCGGACCAGCGGCGAGTCGTCACCTACCCCTTCCCTGAGACCCAGTTCATCGCCGTCACCGCCTACCAGAACGAGGAGGTGACGTCACtgaagataaaatataatcCTTTTGCAAAGGCATTTCTAGATGCAAAAGAACGACCAGACTCAAATTTGTACAGCAGAGACTACATTCCTCCTCAGCAACCACAGTATTCACAATACAGCAGCAACTGGCTCCTCCCGCAGCCGACGTACACGAGCAGTGAGCGCCTGTGTCGTAGCCAACGCAGCGTCCCGTACCCGCCACGCCCCCCCAGCCGGCCCTCCCCCCCTCCTGCCGACCAGTTTGGTGTCTACAACACGGAGCCCTGTTCGTCGGCGGGGCCGGTCTACACACCCACGTACTCCTGGTCCGCACAACCCACCTTCTCCTGCGGGACACCTCCCCCCTCCACCTCGCCCCCCGCCCCCTGGCACCCCTTCCCCTCcgactacccccactaccagcCCGAGTACATCGCCCTGCAGCCGGACTACACACACCTGGAGGCTGTGTCTGTGGAGGGGGAAAGGGAGCGGAGGGACTCTTGGACCCATCTGCATCCGCGCTAG
Protein Sequence: MCLCRWKYVNGEWVPGGKAEVAPPNPIYIHPESPSLGHWWKYVNGEWVPGGKAEVAPPNPIYIHPESPNLGHWWKYVNGEWVPGGKAEVAPPNPIYIHPESPNLEPLYVNGDWVPGGKAEVAPPNPIYIHPESPNLEPLVNSVTMCLCRWKYVNGEWVPGGKAEVAPPNPIYIHPESPSLGHWWKYVNGEWVPGGKAEVAPPNPIYIHPESPNLEPLVEVRERGVGAWGQGGGGAPQPHLHPPGVAQLGPLVNSVTMCLCRWKYVNGEWVPGGKAEVAPPNPIYIHPESPSLGHWWKYVNGEWVPGGKAEVAPPNPIYIHPESPSLGHWMWKYVNGEWVPGGKAEVAPPNPIYIHPESPNLEPLVNSVTMCLCRWKYVNGEWVPGGKAEVAPPNPIYIHPESPSLGHWWKYVNGEWVPGGKAEVAPPNPIYIHPESPNLGHWMWKYVNGEWVPGGKAEVAPPNPIYIHPEWKYVNGEWVPGGKAEVAPPNPIYIHPESPNFGAHWMKESVSFAKVKLTNKTNGSGQIMLNSLHKYEPRVHIVRVGADQRRVVTYPFPETQFIAVTAYQNEEVTSLKIKYNPFAKAFLDAKERPDSNLYSRDYIPPQQPQYSQYSSNWLLPQPTYTSSERLCRSQRSVPYPPRPPSRPSPPPADQFGVYNTEPCSSAGPVYTPTYSWSAQPTFSCGTPPPSTSPPAPWHPFPSDYPHYQPEYIALQPDYTHLEAVSVEGERERRDSWTHLHPR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -