Fatl073865.1
Basic Information
- Insect
- Flexamia atlantica
- Gene Symbol
- byn
- Assembly
- GCA_035578135.1
- Location
- JAQJVK010000022.1:1489021-1497458[+]
Transcription Factor Domain
- TF Family
- T-box
- Domain
- T-box domain
- PFAM
- PF00907
- TF Group
- Unclassified Structure
- Description
- The T-box encodes a 180 amino acid domain that binds to DNA. Genes encoding T-box proteins are found in a wide range of animals, but not in other kingdoms such as plants. Family members are all thought to bind to the DNA consensus sequence TCACACCT. they are found exclusively in the nucleus, and perform DNA-binding and transcriptional activation/repression roles. They are generally required for development of the specific tissues they are expressed in, and mutations in T-box genes are implicated in human conditions such as DiGeorge syndrome and X-linked cleft palate, which feature malformations [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 52 3.5e-18 1.8e-14 56.3 0.0 28 94 1 66 1 68 0.96 2 52 0.00012 0.65 12.2 0.0 58 91 66 99 64 102 0.91 3 52 0.00071 3.7 9.7 0.0 60 93 102 135 99 136 0.89 4 52 1.6e-05 0.086 15.0 0.1 57 93 133 169 130 170 0.92 5 52 0.00038 2 10.6 0.0 59 93 169 202 167 204 0.89 6 52 4e-05 0.21 13.8 0.0 59 96 203 239 198 241 0.87 7 52 1.8e-05 0.094 14.9 0.1 58 93 237 272 235 273 0.93 8 52 0.00011 0.56 12.4 0.0 59 91 272 304 270 307 0.91 9 52 0.00034 1.8 10.7 0.0 60 91 307 338 303 341 0.90 10 52 0.00012 0.6 12.3 0.0 60 93 341 374 338 375 0.93 11 52 2.8e-05 0.15 14.3 0.1 59 93 374 408 371 409 0.93 12 52 0.00021 1.1 11.5 0.0 59 91 408 440 406 443 0.91 13 52 0.00038 2 10.6 0.0 60 91 443 474 440 477 0.91 14 52 0.00013 0.65 12.2 0.0 60 93 477 510 474 512 0.93 15 52 2.3e-05 0.12 14.6 0.1 59 93 510 544 508 545 0.94 16 52 2.3e-05 0.12 14.6 0.1 59 93 544 578 542 579 0.94 17 52 1.9e-05 0.098 14.8 0.1 59 93 578 612 575 613 0.93 18 52 1.9e-05 0.098 14.8 0.1 59 93 612 646 609 647 0.93 19 52 5.3e-05 0.28 13.4 0.1 59 94 646 680 644 681 0.91 20 52 0.00012 0.65 12.2 0.0 58 91 680 713 678 716 0.91 21 52 5.9e-05 0.31 13.2 0.0 60 93 716 749 712 751 0.92 22 52 0.022 1.1e+02 4.9 0.0 59 85 749 775 746 777 0.91 23 52 1.2e-05 0.062 15.5 0.0 58 96 775 812 773 814 0.90 24 52 1.8e-05 0.094 14.9 0.1 58 93 810 845 808 846 0.93 25 52 8.9e-05 0.47 12.6 0.0 59 91 845 877 842 880 0.91 26 52 0.00038 2 10.6 0.0 60 91 880 911 877 914 0.91 27 52 5.9e-05 0.31 13.2 0.0 60 93 914 947 910 949 0.92 28 52 4.3e-05 0.22 13.7 0.1 59 93 947 981 945 982 0.94 29 52 1.6e-05 0.084 15.1 0.1 59 93 981 1015 978 1016 0.94 30 52 3.8e-05 0.2 13.9 0.1 59 93 1015 1049 1013 1050 0.94 31 52 2.9e-05 0.15 14.2 0.1 59 94 1049 1083 1046 1085 0.90 32 52 1.8e-05 0.093 14.9 0.1 58 93 1083 1118 1081 1119 0.93 33 52 1.9e-05 0.097 14.9 0.1 59 93 1118 1152 1115 1153 0.93 34 52 1.8e-05 0.093 14.9 0.1 59 96 1152 1188 1150 1190 0.90 35 52 0.00012 0.65 12.2 0.0 58 91 1186 1219 1184 1222 0.91 36 52 4.7e-05 0.25 13.5 0.0 60 94 1222 1256 1218 1261 0.92 37 52 0.032 1.6e+02 4.3 0.1 59 85 1255 1281 1253 1282 0.92 38 52 2e-05 0.1 14.8 0.0 58 94 1281 1316 1276 1318 0.90 39 52 1.8e-05 0.094 14.9 0.1 58 93 1316 1351 1314 1352 0.93 40 52 0.00026 1.4 11.1 0.1 59 92 1351 1384 1348 1385 0.89 41 52 7.7e-05 0.4 12.8 0.0 57 91 1383 1417 1380 1420 0.90 42 52 0.0001 0.54 12.4 0.0 60 93 1420 1453 1416 1454 0.93 43 52 2.3e-05 0.12 14.6 0.1 59 93 1453 1487 1451 1488 0.94 44 52 2.9e-05 0.15 14.2 0.1 59 94 1487 1521 1484 1523 0.90 45 52 7.8e-05 0.4 12.8 0.0 58 91 1521 1554 1518 1557 0.91 46 52 0.00013 0.7 12.1 0.0 60 93 1557 1590 1553 1591 0.92 47 52 2.3e-05 0.12 14.6 0.1 59 93 1590 1624 1588 1625 0.94 48 52 2.3e-05 0.12 14.6 0.1 59 93 1624 1658 1622 1659 0.94 49 52 3.4e-05 0.18 14.0 0.1 59 93 1658 1692 1656 1693 0.94 50 52 1.9e-05 0.098 14.8 0.1 59 93 1692 1726 1689 1727 0.93 51 52 3.4e-05 0.18 14.0 0.1 59 93 1726 1760 1724 1761 0.94 52 52 1.3e-05 0.07 15.3 0.1 59 94 1760 1795 1757 1798 0.92
Sequence Information
- Coding Sequence
- ATGTTCCCCGTGGTGAAGATCAGCATCACAGGCTTGGACCCGACCGCCATGTACTCAGTTCTGCTGGAGTTCGTGCAGATTGAACAGCACAGGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCGGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAGCTTGGGCCACTGGATGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCTGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAGCTTGGGCCACTGGTCGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCTGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAACTTGGACCACTGGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCTGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAGCTTGGGCCACTGGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCTGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAACTTGGACCACTGGTCGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCGGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAACTTGGGCCACTGGATGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCGGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAACTTGGGCCACTGGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCGGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAACTTGGGCCACTGGTCGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCGGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAACTTGGGCCACTGGTCGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCGGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAGCTTGGGCCACTGGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCTGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAGCTTGGGCCACTGGTGGAAGTACGTGGACGGGGAGTGGGTGCCTGGGGGCAAGGCTGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCAAACTTGGGCCACTGGTCGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCGGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAACTTGGGCCACTGGTCGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCGGAGTTGGCGCCCCCCAACCCCATATACATCCACCCGGAGTCGCCCAGCTTGGGCCACTGGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCTGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAACTTGGGCCACTGGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCGGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAACTTGGGCCACTGGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCGGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAACTTGGGCCACTGGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCGGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAACTTGGGCCACTGGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCGGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAACTTGGGCCACTGGATGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCGGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAGCTTGGGCCACTGGTCGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCGGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAACTTGGGCCACTGGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCGGAGTTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCTGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAACTTGGGCCACTGGATGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCTGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAACTTGGGCCACTGGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCTGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAACTTGGGCCACTGGTCGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCGGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAACTTGGGCCACTGGTCGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCGGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAACTTGGGCCACTGGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCGGAGTTGGCGCCCCCCAACCCCATATACATCCACCCGGAGTCGCCCAGCTTGGGCCACTGGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCTGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAACTTGGGCCGATGGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCGGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAGCTTGGGCCACTGGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCTGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAACTTGGGCCACTGGATGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCGGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAACTTGGGCCACTGGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCGGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAACTTGGGCCACTGGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCGGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAACTTGGGCCACTGGATGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCGGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAGCTTGGGCCACTGGTCGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCGGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAACTTGGGCCACTGGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCGGAGTTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCTGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAACTTGGGCCACTGGATGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCTGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAACTTGGGCCACTGGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCTGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAACTTGGACCACTGGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCGGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAGCTTGGGCCACTGGTCGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCTGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAGCTTGGGCCACTGGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCGGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAACTTGGGCCACTGGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCGGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAACTTGGGCCACTGGATGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCTGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAACTTGGGCCACTGGTCGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCGGAGTTGGCGCCCCCCAACCCCATATACATCCACCCGGAGTCGCCCAGCTTGGGCCACTGGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCTGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAACTTGGGCCACTGGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCGGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAACTTGGGCCACTGGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCGGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAGCTTGGGCCACTGGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCGGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAACTTGGGCCACTGGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCGGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAGCTTGGGCCACTGGTGGAAGTACGTGAACGGGGAGTGGGTGCCTGGGGGCAAGGCGGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAACTTGGGCCACTGGTGGAAGTACGTGAACGGGGAGTGGGTCCTGGGGGCAAGGCTGAGGTGGCGCCCCCCAACCCCATCTACATCCACCCGGAGTCGCCCAACTTGGGCCACTGGTTAA
- Protein Sequence
- MFPVVKISITGLDPTAMYSVLLEFVQIEQHRWKYVNGEWVPGGKAEVAPPNPIYIHPESPSLGHWMWKYVNGEWVPGGKAEVAPPNPIYIHPESPSLGHWSKYVNGEWVPGGKAEVAPPNPIYIHPESPNLDHWWKYVNGEWVPGGKAEVAPPNPIYIHPESPSLGHWWKYVNGEWVPGGKAEVAPPNPIYIHPESPNLDHWSKYVNGEWVPGGKAEVAPPNPIYIHPESPNLGHWMWKYVNGEWVPGGKAEVAPPNPIYIHPESPNLGHWWKYVNGEWVPGGKAEVAPPNPIYIHPESPNLGHWSKYVNGEWVPGGKAEVAPPNPIYIHPESPNLGHWSKYVNGEWVPGGKAEVAPPNPIYIHPESPSLGHWWKYVNGEWVPGGKAEVAPPNPIYIHPESPSLGHWWKYVDGEWVPGGKAEVAPPNPIYIHPESPNLGHWSKYVNGEWVPGGKAEVAPPNPIYIHPESPNLGHWSKYVNGEWVPGGKAELAPPNPIYIHPESPSLGHWWKYVNGEWVPGGKAEVAPPNPIYIHPESPNLGHWWKYVNGEWVPGGKAEVAPPNPIYIHPESPNLGHWWKYVNGEWVPGGKAEVAPPNPIYIHPESPNLGHWWKYVNGEWVPGGKAEVAPPNPIYIHPESPNLGHWWKYVNGEWVPGGKAEVAPPNPIYIHPESPNLGHWMWKYVNGEWVPGGKAEVAPPNPIYIHPESPSLGHWSKYVNGEWVPGGKAEVAPPNPIYIHPESPNLGHWWKYVNGEWVPGGKAELAPPNPIYIHPEWKYVNGEWVPGGKAEVAPPNPIYIHPESPNLGHWMWKYVNGEWVPGGKAEVAPPNPIYIHPESPNLGHWWKYVNGEWVPGGKAEVAPPNPIYIHPESPNLGHWSKYVNGEWVPGGKAEVAPPNPIYIHPESPNLGHWSKYVNGEWVPGGKAEVAPPNPIYIHPESPNLGHWWKYVNGEWVPGGKAELAPPNPIYIHPESPSLGHWWKYVNGEWVPGGKAEVAPPNPIYIHPESPNLGRWWKYVNGEWVPGGKAEVAPPNPIYIHPESPSLGHWWKYVNGEWVPGGKAEVAPPNPIYIHPESPNLGHWMWKYVNGEWVPGGKAEVAPPNPIYIHPESPNLGHWWKYVNGEWVPGGKAEVAPPNPIYIHPESPNLGHWWKYVNGEWVPGGKAEVAPPNPIYIHPESPNLGHWMWKYVNGEWVPGGKAEVAPPNPIYIHPESPSLGHWSKYVNGEWVPGGKAEVAPPNPIYIHPESPNLGHWWKYVNGEWVPGGKAELAPPNPIYIHPEWKYVNGEWVPGGKAEVAPPNPIYIHPESPNLGHWMWKYVNGEWVPGGKAEVAPPNPIYIHPESPNLGHWWKYVNGEWVPGGKAEVAPPNPIYIHPESPNLDHWWKYVNGEWVPGGKAEVAPPNPIYIHPESPSLGHWSKYVNGEWVPGGKAEVAPPNPIYIHPESPSLGHWWKYVNGEWVPGGKAEVAPPNPIYIHPESPNLGHWWKYVNGEWVPGGKAEVAPPNPIYIHPESPNLGHWMWKYVNGEWVPGGKAEVAPPNPIYIHPESPNLGHWSKYVNGEWVPGGKAELAPPNPIYIHPESPSLGHWWKYVNGEWVPGGKAEVAPPNPIYIHPESPNLGHWWKYVNGEWVPGGKAEVAPPNPIYIHPESPNLGHWWKYVNGEWVPGGKAEVAPPNPIYIHPESPSLGHWWKYVNGEWVPGGKAEVAPPNPIYIHPESPNLGHWWKYVNGEWVPGGKAEVAPPNPIYIHPESPSLGHWWKYVNGEWVPGGKAEVAPPNPIYIHPESPNLGHWWKYVNGEWVLGARLRWRPPTPSTSTRSRPTWATG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -