Fatl003754.1
Basic Information
- Insect
- Flexamia atlantica
- Gene Symbol
- SMARCC2
- Assembly
- GCA_035578135.1
- Location
- JAQJVK010000001.1:54881067-54913324[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 7e-15 4.7e-11 44.9 0.2 3 44 481 522 479 524 0.95 2 5 0.095 6.3e+02 2.9 0.0 25 44 535 554 531 556 0.89 3 5 0.34 2.3e+03 1.1 0.0 25 44 567 586 563 588 0.88 4 5 0.34 2.3e+03 1.1 0.0 25 44 602 621 598 623 0.88 5 5 0.053 3.6e+02 3.7 0.0 24 39 636 651 633 652 0.89
Sequence Information
- Coding Sequence
- ATGGACAGAAATGTAGAGATGTTCATGAATGTTGAAAAAGCACTGATTCAGAACAAGTTCTTCACTCTTCCAGTTGTGTATATTCGTCCCGACGTGGATAAAGCTAATGCTTCCAGGGTGAAAGATATAATCAAGAGACACCAAGGAACAGTCACTGAGTCGGAAGCAGAGGCGACGCACATCATCCACCCTGTTTGTGACCCCCTGGACGAGGAGTACGCTCGCCCGTCACTCAAGCGAGATCGGATGGTGCTCATGCACTGGTACTACTTCCCCGACTCACACGACTCGTGGGTATCGGCAGACCTTCCCCTCGACCCCCCTGACAGCCCCCCGCCTCACTCCGGGCCCTGGAGGGTTTCTGCTTCTTGGGCGCTTGATCTTGACCAGTACAATGAATGGATGAATGAAGAAGATTATGAAATGGATGAAAGTGGAAGGAAAAAAGTACACAagctcCGATTATCTGTTGAAGACCTTATGAGTCAAGGGGATCCGGACAGATCTAAGAAGAAACAGAAGAGGAAGAGGTCACCCTCTCCACCGCCCAAAGGGAAAAGGAAGAGTGGTCGCAGCCCGGCGGTCGGCTCCAAGAAGCCGCGGTCGGACGACAACGACGACGAGGCCGACGACCTGACCAAGGACATGGCCGAGCCCACCCCCGAGCCCAACGTCACCGAGGTGCCCGTCCCCAAGCCAGGTTCTTCTATATCCTCCAAAAAAGACATTGACACTCAGCCTATTAAAAGTGGAACTATCGCTGATCTGGATGAAGATGGAGATAAAAATGATGATGGAGATAATGCAAAGAGCCCAGAAAACCAAAATCACCAGGATGGTAGTAACAAAGACAAAGAAGATACCCATGAGGACAATGTGACTGAACAAACTCATCACATAATCATTCCGAGTTATTCGGCTTGGTTTGATTACAACTCAATTCACACAATTGAAAAGAGGGCTTTACCTGAATTTTTCAATGgcaaaaacaaatcaaagacTCCTGAAATCTACCTTGCATACCGCAACTTCATGATCGACACGTACAGGCTCAACCCAACTGAGTATATCACGAGTACTGCTGCGAGACGCAACCTCGCCGGTGATGTCTGTGCCATCATGAGGGTGCATGCCTTCCTGGAGCAGTGGGGACTCATCAACTACCAGGTGGATGCAGACAGCAGGCCCACGCCGATGGGTCCGCCGCCCACCTCGCACTTCCACGTGCTGTCGGACACTCCGTCCGGCCTGCAGCCCGTCAACCCGCCCAAGACGCCCCAGCCCTCCGCCGCCAAGACCCTGCTCGATCTCGACAAGAAGATCGACGGAACACCCAAGAAACCCGACAGCGACCTCGGCATGAACTTCGGCCTCAAACTGGACCAGTACGCACGCAAGCCGGCAGTGCTGCGCAACAAGACGGCGGCATCGATGACGCGGGACTGGACGGAGCAGGAGACTCTGCTGCTGCTGGAGGGCCTGGAGCTGTACAAAGACGACTGGAACAAGGTCTGCGAACACGTCGGCTCGCGCACGCAGGACGAGTGCATACTGCACTTCCTGCGGCTACCGATAGAGGACCCCTACCTGGAGGATCACGAGGCTGTGTGCCAACACGTCGGCTCATGCACGCAGGACGAGTGCATACTGCACTTCCTGCGGCTACCGATAGAGGACCCCTACCTGAAGGATCACGAGGCTGTGTGCCAACACGTCGGCTCATGCACGCAGGACAAATGCATACTGCACTACCTGCGACTGCCGAAAGAGGACCCCTACCGGCCCTACCTGAAGGATCACGAGGCTGTGTGCCAACACGTCGGCTCATGCACTCAGGACAAGTGCATACTGCACTACCTGCGACTGCCGAAAGAGGACCCCTACCGGCCCTACCTGAAGGATCACGAGGCTGTGTGCCAACACGTCGGCTCGCGCACGCAGGACGAGTGCATAGCCGATGTGCGACTGCCGATAGAGGACCCCTACCTGGAGGATCTCGAGGCCGGTGGGTAA
- Protein Sequence
- MDRNVEMFMNVEKALIQNKFFTLPVVYIRPDVDKANASRVKDIIKRHQGTVTESEAEATHIIHPVCDPLDEEYARPSLKRDRMVLMHWYYFPDSHDSWVSADLPLDPPDSPPPHSGPWRVSASWALDLDQYNEWMNEEDYEMDESGRKKVHKLRLSVEDLMSQGDPDRSKKKQKRKRSPSPPPKGKRKSGRSPAVGSKKPRSDDNDDEADDLTKDMAEPTPEPNVTEVPVPKPGSSISSKKDIDTQPIKSGTIADLDEDGDKNDDGDNAKSPENQNHQDGSNKDKEDTHEDNVTEQTHHIIIPSYSAWFDYNSIHTIEKRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYITSTAARRNLAGDVCAIMRVHAFLEQWGLINYQVDADSRPTPMGPPPTSHFHVLSDTPSGLQPVNPPKTPQPSAAKTLLDLDKKIDGTPKKPDSDLGMNFGLKLDQYARKPAVLRNKTAASMTRDWTEQETLLLLEGLELYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDHEAVCQHVGSCTQDECILHFLRLPIEDPYLKDHEAVCQHVGSCTQDKCILHYLRLPKEDPYRPYLKDHEAVCQHVGSCTQDKCILHYLRLPKEDPYRPYLKDHEAVCQHVGSRTQDECIADVRLPIEDPYLEDLEAGG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -