Fatl084526.1
Basic Information
- Insect
- Flexamia atlantica
- Gene Symbol
- -
- Assembly
- GCA_035578135.1
- Location
- JAQJVK010000075.1:846376-846756[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5e-08 5.4e-05 25.1 0.0 1 38 6 42 6 48 0.89
Sequence Information
- Coding Sequence
- ATGAGGAAGAGATATACTAATGACGACATGCATAAAGCGATTTTGGCATTCAGAAGCGGGGCCTCAATAGCTGGAGCCGCCAGACAGTACGGAGTTTCGAGAGTGACGCTTATGGATAAGCTGTCAGGGAGGACCTCAGAATTGTGCAGAATGGGAAGAAAGCCAGTCCTCAGGGAAGAGGAGGAGCAAATCCTGGTGAGGTGGATCTTGCAGTGCAAATTTGCTGGATTCCCCATATCCACGGACCAGCTCATCCAGAGCACTcatcaaataatgaaaaagttggGGAAGGAGGACATCTTTCAAAAGGGGGCTCCAACAAAAAGATGGGTGGAGGATTTCCTCAAAAGACACCCCGAACTTTCTTTGAGGGAGAGCTAA
- Protein Sequence
- MRKRYTNDDMHKAILAFRSGASIAGAARQYGVSRVTLMDKLSGRTSELCRMGRKPVLREEEEQILVRWILQCKFAGFPISTDQLIQSTHQIMKKLGKEDIFQKGAPTKRWVEDFLKRHPELSLRES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -