Fatl083673.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Flexamia atlantica
Gene Symbol
Clasrp
Assembly
GCA_035578135.1
Location
JAQJVK010000060.1:1416832-1453425[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.6e-08 1.7e-05 26.7 0.0 2 42 14 53 13 55 0.91

Sequence Information

Coding Sequence
atgCCTGCTGAGGCGAAAAACCCAAGGAGGGCGTATTCTCAAGAAACGATGGAAGAGGCGATACTAGCCGTACAGGGTGGCATGTCGGTGTCAGCTGCGGCCAAACAGTTCCTGGTACCCCGCCAAACCTTAAAAGATAAGATCAGCGGGAAGTATGGGGTCAACTGTAAGATGGGAAGGCCATCAATTTTAACACCGGAGGAAGAGGATGTGATCAAAAACTGGATCATCTCGATTGGTGCCGCCGGATTTCCAGTGTCAAAAGAACAAATACTGGGCAGCGTAAAAAAGTTGATGGCAAACCTGAAGAGGGAAAACCCTTTCGCTCAGTCTGCCCCTGGAGATAAATGGTTCACCCTCTTTCTCCAGCGTCACCTGGACATCTCAGCGAGAGTCAGTCAAGCTTTGACCACGTCGAGATCAAACGTGactgaaattcaaattaaacaatGGTTTGACGAAGTAAAAACTTACGTCAAATCCAAAAATCTCGAGGATTGCTTCAAAGACCCGAGAAGAATTTTTAATTGCGACGAAAGCGTATTTTTCCTTTGTCCCAAAGGAAAAACTGTGTACGTTCGGAGAGGGGAGAAGCATGTTTATAGCATAACGGGTAATGACGAAAAGGAGTGTCTGACGGCCCTGGTGACGGCAAACGCAGCTGGTGATCTTGCACCACCCATGGTAGTCTTCGCGTACGAACGTGTACCAGCAAACATCGTGAAGAAAGTCCTGGACTCATGGGGGATCGGGAAGTCAGAGTCCGGCTGGATGACGGGGGAGACGTTCTTTGAATATGTCACCAACGTCTTCTACCCGTGGCTGCTATTGAAAACGATCCCGAGGCCTATCGTTCTATTTGTTGATGGCCATTCTTCCCATGTAACCTTCCATCTCAGCGAGTTCTGCTCATCAAAACAAATAGAGCTGATTAGCCTGTACCCTAATGCGACTCACATATTACAGCCCATGGACGTGGCTGTCTTCCACCCAGTAGAAGACGCGTGGAAGAAAAGCGTCCAAGAATGGAGGTGTGAGAATGGAGcggccaaaataaaaaaagaagatttCGCCCCCATGCTAAAATCTGTCCTTGACAGCAGCGCGAAGCCAGAGGCGATCAAGAATGGCTTCACTTGCACTGGCCTTCTCTCCCTTGATCCCAGCAAAGTCAACTTTTTCAACGTGGGGAAGGGAAAAAAGGCTAAAGAATCGACTCAAAGCCAGTACACCCACAGCCAGTTACTGACCTTAAAGGGACACATGACCTTTCTTGAGGCTAAGATCGGCCAAGAAAGGATGGGGAGGTTCAAGGAGGGCTCCTTTACCTCAGAGGAAACGGCCCTCTACGATATTTGGAAGTCTGTAAACCAAGAGATAGTCGAATACCGCAGACATCTTGACCTCCAGAACACCAAAACTCCGATCGTGCCCTCTGAACTAGTCCATTCTGAGACCACCGTGAGCAAAAACTGCGATATAACCAAAGTCGACGAGGCCAACAACGACAAAGAAGAGACAGGTGAAGTGTTCGAGGCTATTGTCTTGGCCACCAACACCAACGGAGGCTTTCAATGGGATCAAAGCCTGGGCGACCTGTCATTCCCTCTGGAACTTGATGTTCCAGTGTGCAGCTACGAACCTGGGTTTTCAAGCTTGCCCATAGCTAAGGCTTTAGAACTTGCCGAATCGCCCATCATGAGAAGGATGAATGACTCTGACCCCGACCCTGTGCCTTGCACAAATTCTGCTGGCTTCGCTACACAAAAAAGCACCGAAACGTCGCCCATCATAATAAGGACCAGCGAATCTAACTCCGACCCTGTGACTTGCACAAACTCTGCTGGCTTCGCTACACAAAAAAGCACCGAAACATCGCCCATCATAATAAGGACCAGTGAATCTAACCCCGAACCTGTGACTGGCACAAACTCTGCTGGCTTCGCTACACAAAAAAGCACCGAAACATCACCCATCAAGATAAGGACCAGCGGCTCTGATCCCGCCCCTGTGCTTATCACAAGCTCTACTGACTGCTCTACCGAAACGAAGACTCCTCCAAAACACACGGAGCTGAAGGAGAAGTTATCAACTCCTTTCAAGAGAGCAATGTTTTGGCCGGATGTTTCttcaactaaaacaaaaaaaagaccATCTAAAATTCGATTCCCTTCGGCTATAACATCAGAAGAATGGAAGAATTATTATATCCAAAAggaagaagaaaagaaaaaggcAGAAgatgaaaaggaaaaaagaaaacaaatcagGGAGCAGAAAATGAAAGAGAAGAtggaaaaagaaaagaagaaaagtTTGAAAAGGAAGAAGATCGCGGAAGATTCCGAAGAAGATTCTGATCCTGACGATCCCGATGACTTAGGAGTCAATCCCTTACAAGAGGAACCGGCACAGCTCGAAAAAATGGAACCAGTCGACACTAACACCCTGCGTGTTAGTCAGTGGGTGGTCGTTCCTTATCCGGACAAAAAACTGTATGCAGGACAAATTCTATCGCTGTCAGAATCAACTGAAAGTAAAACTGCAGTTGTTAAGTTTTTAGAGAAGAAACTTTATGAAAAAAAGTACAGTTGGCCGATTCACGACGACATCGATTGGGAGGTTCCCGTTTCAGACATTGTCAAAATTTTGGAAGAACCAACGTTTGATTTGTGGGGGCCGTATCGTGAAGGTCGTCGGATCCACGTGACTCACCCCTTCGGCTCGGCTTCtcttcaaggtcattgcccaacccctcccatcatcctgttGTTTTGCAACACTCCACTTGTCACAGATCATAACAGTGTCATCCCTTACACCGTCTGGATGTCATGGCAGGGAAACCACGATATTCTGATTGACAGATTTGATGTGAGAGCACACCTGGATTTCATACCAGAGAATACTTCCAAAGATGATGAAGAGGAGGAACTTTCACAAGAGGAAAGATATATTAATTACGAACGTTATCGTATACTTGCTCAAAATGACTTCTTGGGAGTGAGTGAAGACAAATTTCTACAGCAATTGGCACTTGAAGAGCAATTTGGACCTGTTGAAAAGTCAGAACCACCACCAATAGAAGGCAAGAAAAagGTCACGGGAGCTGCTATCGGTTACAACTACAATGAGGGCACCTCATCCACCAGTGTGagcggagggggagggggaggagtGGCGGGGGTGAGTGGAGGGGGCTCGGGAGAGCCGCCAGCCAATGAGAAAGACTCGAGCAGTGATAATGAAAACGATGACGATGAAGATGAGGACAGTGATATTGATTTTGACCTATGTGTCGATGTGAACAAGATCAGCTCGGCGCAGGCTCACGAGATGAACGCGGCCGCGTTGGCGTACGGGATGTGTAGTAATGACTTCTTCAGCTTCCTCACGCGGGATGTGGAGGAGGCGGAGACATTGAAACTGGCGAGGGAGCGCGAGGAAGAGAAGGCCATGTTCTCGGTAGGCTATGCAGCATCCAAGGCAGCACCCATTGCAGATCTGATCCGCGTAGTCACCAAATCTCGGTCCCGAAGCAAATCGCGATCTGTGTCGCCGCCAAACGCTGGAATGATACAATACATCACAAGTTTCGGCGGGGATGAAGCCCCTTTAGAGCCTCCTCCCCCTCAAGTCATCAAGACCAGCGTACATTCGAGCAAGCAGGACGATAGAACATACAAACGAACAGTCAGGTATAGGAACTCGAGATCTCCCGAGCCTGTCAGACGAAGCTGTAACCCACAGGTCGGTGGAAAGGTCACTGGGGGCGAGGAGAAGGTCAAGGTCAAACAGTCCGTCGTGGAGGTCGAGGTCACCGACCAGTCGCACCGTCCGATACCACTCCAGGTCCCGCTCGCCGGCCGGAAGTGTGGAGAGTTCTCGGGACCAGGGCCTCAACAATGCGAGacGCATGAGAAAGAGTTTTGGAAACAATTCACGAGGGATTTGTCCTTGAGCGGCTGGAAATATTCTATGGCGTCACTTTTGTTGCTACGGCATGCAACCAGATTAGTTCGAATTGCAGACGGGGAGAGCAGCACAGTACAAGGATTGTCGTTGGCCACGCCCAATTTCAGTTGTAATTCACTCATCCGGAGCGCCACAAACCGTAAATTGTATGTTCATTGGACAGTGAAGGAGTCGGCTTCGCCCCAGCCTGTGAGGAGTGTCGAGGTACCGGCACCGCCCGTTATTACGAGATATTATGGTCGCCGAAAGAATGAGTCGTCTTCTTCGGAATTGGATTTGTCGGATTCTGACGAGAAAAATGATCAGAACTCAGAAAAAGCCTCTTCTGACAAGAATGTTCAAGCAGTGGGTAATGCGGGTGGCAGATTCAAACCTGGAGCTTCCTCAAGTTGCCAAGCTACTTCCAAAATGTCAGTGCAAGAGCGGCTTAAGAAAAAGAGACAAGCATTGATCAATAGACAAtACAAGGCAGACAAGAAGGCAGAACGACTCAGACAGGAGAAGGCAGAGCAGGAGAGGCAAGACAGGGAAGACGAAATGAGGGAGATCTCAATCAAGATGAGAAGGAGGGAGCGGCAGAAGCGACACCAGTACTACGAACTGGACGACACTAATGCGGCCGAGTTGTCGGACGAGGACAGACTCAGCTCGGGCAGCTCGGCGACCGGCAGCGACAGGCCGGCGTCCGACTCGGAGCACagATCTAGATCCCGTTTGTCGAAGAGATCTAACAGGACCCAAGACTCAGACAGGGGACACAACAGTCGAGAGAGGGACAGAAGCAGAGAGAGAGGGAAAGAATCTTGGAGGGACAGAGGACGATCACCAGATCGGGATAGAGAaagATGGTCGAGGAGGAGGGAGGAGGAACGACCTTGGAGGGACAGGTCGAGGGAAAGGGGCAGGGACCCCAGAGACAACAGAGACACAAGGGACAGGTCCAGAGATTGGAGAAGGGACAGAGACAGAGAGTGGGGCCAGGACAGAGATAGAGATAGAGAGTGGGGCCAGGACAGAGACAGGGACAGAGATAGAGATAGAGAGTGGGGCCAGAACAGAGATAGGGACAGAGAGAGAGATAGAGGCAGAGATAGGTACTTCAATCGTCGCGGTAGAGAGCAGGACTCTTCCGATGGTGCAGTTGTTGTGAAGGCTAAAAGgCCTCTGGTGGATTATTAA
Protein Sequence
MPAEAKNPRRAYSQETMEEAILAVQGGMSVSAAAKQFLVPRQTLKDKISGKYGVNCKMGRPSILTPEEEDVIKNWIISIGAAGFPVSKEQILGSVKKLMANLKRENPFAQSAPGDKWFTLFLQRHLDISARVSQALTTSRSNVTEIQIKQWFDEVKTYVKSKNLEDCFKDPRRIFNCDESVFFLCPKGKTVYVRRGEKHVYSITGNDEKECLTALVTANAAGDLAPPMVVFAYERVPANIVKKVLDSWGIGKSESGWMTGETFFEYVTNVFYPWLLLKTIPRPIVLFVDGHSSHVTFHLSEFCSSKQIELISLYPNATHILQPMDVAVFHPVEDAWKKSVQEWRCENGAAKIKKEDFAPMLKSVLDSSAKPEAIKNGFTCTGLLSLDPSKVNFFNVGKGKKAKESTQSQYTHSQLLTLKGHMTFLEAKIGQERMGRFKEGSFTSEETALYDIWKSVNQEIVEYRRHLDLQNTKTPIVPSELVHSETTVSKNCDITKVDEANNDKEETGEVFEAIVLATNTNGGFQWDQSLGDLSFPLELDVPVCSYEPGFSSLPIAKALELAESPIMRRMNDSDPDPVPCTNSAGFATQKSTETSPIIIRTSESNSDPVTCTNSAGFATQKSTETSPIIIRTSESNPEPVTGTNSAGFATQKSTETSPIKIRTSGSDPAPVLITSSTDCSTETKTPPKHTELKEKLSTPFKRAMFWPDVSSTKTKKRPSKIRFPSAITSEEWKNYYIQKEEEKKKAEDEKEKRKQIREQKMKEKMEKEKKKSLKRKKIAEDSEEDSDPDDPDDLGVNPLQEEPAQLEKMEPVDTNTLRVSQWVVVPYPDKKLYAGQILSLSESTESKTAVVKFLEKKLYEKKYSWPIHDDIDWEVPVSDIVKILEEPTFDLWGPYREGRRIHVTHPFGSASLQGHCPTPPIILLFCNTPLVTDHNSVIPYTVWMSWQGNHDILIDRFDVRAHLDFIPENTSKDDEEEELSQEERYINYERYRILAQNDFLGVSEDKFLQQLALEEQFGPVEKSEPPPIEGKKKVTGAAIGYNYNEGTSSTSVSGGGGGGVAGVSGGGSGEPPANEKDSSSDNENDDDEDEDSDIDFDLCVDVNKISSAQAHEMNAAALAYGMCSNDFFSFLTRDVEEAETLKLAREREEEKAMFSVGYAASKAAPIADLIRVVTKSRSRSKSRSVSPPNAGMIQYITSFGGDEAPLEPPPPQVIKTSVHSSKQDDRTYKRTVRYRNSRSPEPVRRSCNPQVGGKVTGGEEKVKVKQSVVEVEVTDQSHRPIPLQVPLAGRKCGEFSGPGPQQCETHEKEFWKQFTRDLSLSGWKYSMASLLLLRHATRLVRIADGESSTVQGLSLATPNFSCNSLIRSATNRKLYVHWTVKESASPQPVRSVEVPAPPVITRYYGRRKNESSSSELDLSDSDEKNDQNSEKASSDKNVQAVGNAGGRFKPGASSSCQATSKMSVQERLKKKRQALINRQYKADKKAERLRQEKAEQERQDREDEMREISIKMRRRERQKRHQYYELDDTNAAELSDEDRLSSGSSATGSDRPASDSEHRSRSRLSKRSNRTQDSDRGHNSRERDRSRERGKESWRDRGRSPDRDRERWSRRREEERPWRDRSRERGRDPRDNRDTRDRSRDWRRDRDREWGQDRDRDREWGQDRDRDRDRDREWGQNRDRDRERDRGRDRYFNRRGREQDSSDGAVVVKAKRPLVDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-