Fatl023972.1
Basic Information
- Insect
- Flexamia atlantica
- Gene Symbol
- Arl14ep
- Assembly
- GCA_035578135.1
- Location
- JAQJVK010000003.1:28866786-28873440[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.5e-10 4.8e-07 31.7 0.0 3 37 16 49 14 54 0.92
Sequence Information
- Coding Sequence
- atggCTTTTCCAAGATCAGGAAAAACCCAGAGGACATGGTCATTGGACAGTATGCGACAGGCGTTACAGGCCGTTGACAACGGAATGTCGATTCGTAGCTCTTCGGAGCTTTACGGGATTCCACGGAACACCCTCACTTCATACGTCGCCAGTGAACTCAGACTTGAAGATGAAATGAAGTTCATGGAAAATTTTGACCCTGAAAAAAGTAAAAGGGAACAGAGGAAGCTAAATAGGAAGTTTTCAAACTTGTCGGTGAGGAAGACAGTGTACGATGATAAGGGTATTCACGTGAAGACGGGCCTGGACTTGTGCGACTGCCTCAATGACAAGTGCGAGGGTTGCTTCTTTGCCTGTCCTAAGTGCCGGTCGTTGAAGTGTGGCCACGAGTGTCGGCAAAATCGCCGATGGATGTACGAATCTTACACAGTTCAAGGGATGGATGAAATCATCCAAAACCAATACATGGACCACTGA
- Protein Sequence
- MAFPRSGKTQRTWSLDSMRQALQAVDNGMSIRSSSELYGIPRNTLTSYVASELRLEDEMKFMENFDPEKSKREQRKLNRKFSNLSVRKTVYDDKGIHVKTGLDLCDCLNDKCEGCFFACPKCRSLKCGHECRQNRRWMYESYTVQGMDEIIQNQYMDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00808244;
- 90% Identity
- -
- 80% Identity
- -