Fatl071151.1
Basic Information
- Insect
- Flexamia atlantica
- Gene Symbol
- -
- Assembly
- GCA_035578135.1
- Location
- JAQJVK010000020.1:449323-458882[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 3.6 3.9e+03 -0.0 0.0 1 19 76 94 76 95 0.90 2 11 3.6 3.9e+03 -0.0 0.0 1 19 292 310 292 311 0.90 3 11 2.2 2.3e+03 0.7 0.0 1 19 392 410 392 411 0.91 4 11 3.6 3.9e+03 -0.0 0.0 1 19 428 446 428 447 0.90 5 11 3.6 3.9e+03 -0.0 0.0 1 19 572 590 572 591 0.90 6 11 3.6 3.9e+03 -0.0 0.0 1 19 608 626 608 627 0.90 7 11 3.6 3.9e+03 -0.0 0.0 1 19 644 662 644 663 0.90 8 11 3.6 3.9e+03 -0.0 0.0 1 19 788 806 788 807 0.90 9 11 3.6 3.9e+03 -0.0 0.0 1 19 824 842 824 843 0.90 10 11 3.6 3.9e+03 -0.0 0.0 1 19 860 878 860 879 0.90 11 11 3.4 3.7e+03 0.0 0.0 1 19 1004 1022 1004 1024 0.90
Sequence Information
- Coding Sequence
- ATGGTGCAGACTGAGGACGAGTTGCTGAGGAAGGTCCGAGAGTGCTGGGGCGGCAGGCTGAGTGTGGCTGACACAGTGCTGCAGCTGCGGCGGCAGAGACACCACAAGATGGTGAAGACTGAGGACGAGTTGCTGAGGAAGGTCCAAGAGAGCTGGGGCGGCAGGCTGAGTGTGGCTGACACAGTGCTGCAGCTGCGGCAGCAGAGACACCACAAGATGGTGCAGACTGAGGACGAGTTGCTGAGGAAGGTCCGAGAGTGCTGGAGCGGCAGGCTGAGTGTGGCTGACACAGTGCTGCAGCTGCAGCGGCAGAGACACCACAAGATGGTGCAGACTGAGGACGAGTTGCTGAGGAAGGTCCGAGAGAGCTGGAGCGGCAGGCTGAGTGTGGCTGACACAGTGCTGCAGCTGCGGCGGCAGAGACACCACAAGATGGTGCAGACTGAGGACGAGTTGCTGAGGAAGGTCCGAGAGTGCTGGGGCGGCAGGCTGAGTGTGGCTGACACAGTGCTGCAGCTGCGGCGGCAGAGACACCACAAGATGGTGCAGACTGAGGACGAGTTGCTGAGGAAGGTCCGAGAGTGCTGGGGCGGCAGGCTGAGTGTGGCTGACACAGTGCTGCAGCTGCGGCGGCAGAGACACCACAAGATGGTGCAGACTGAGGACGAGTTGCTGAGGAAGGTCCGAGAGAGCTGGAGCGGCAGGCTGAGTGTGGCTGACACAGTGCTGCAGCTGCGGCGGCAGAGACACCACAAGATGGTGCAGACTGAGGACGAGTTGCTGAGGAAGGTCCGAGAGTGCTGGGGCGGCAGGCTGAGTGTGGCTGACACAGTGCTGCAGCTGCGGCGGCAGAGACACCACAAGATGGTGCAGACTGAGGACGAGTTGCTGAGAAAGGTCCGAGAGTGCTGGAGCGGCAGGCTGAGTGTGGCTGACACAGTGCTGCAGCTGCAGCGGCAGAGACACCACAAGATGGTGCAGACTGAGGAAGGTCCGAGAGTGCTGGGGCGGCAGGCTGACACAGTGCTGCAGCTGCGGCGGCAGAGACACCACAAGATGGTGCAGACTGAGGACGAGTTGCTGAGGAAGGTCCGAGAGTGCTGGAGCGACAGGCTGAGTGTGGCTGACACAGTGCTGCAGCTGCGGCGGCAGAGACACCACAAGATGGTGCAGACTGAGGACGAGTTGCTGAGGAAGGTCCAAGAGTGCTGGAGCGGCAGGCTGAGTGTGGCTGACACAGTGCTGCAGCTGCGGCGGCAGAGACACCACAAGATGGTGCAGACTGAGGACGAGTTGCTGAGGAAGGTCCGAGAGTGCTGGAGCGGCAGGCTGAGTGTGGCTGACACAGTGCTGCAGCTGCGGCGGCAGAGACACCACAAGATGGTGCAGACTGAGGACGAGTTGCTGAGGAAGGTCCGAGAGTGCTGGGGCGGCAGGCTGAGTGTGGCTGACACAGTGCTGCAGCTGCGGCGGCAGAGACACCACAAGATGGTGCAGACTGAGGACGAGTTGCTGAGGAAGGTCCGAGAGAGCTGGGGCGGCAGGCTGAGTGTGGCTGACACAGTGCTGCAGCTGCGGCGGCAGAGACACCACAAGATGGTGCAGACTGAGGACGAGTTGCTGAGGAAGGTCCGAGAGAGCTGGAGCGGCAGGCTGAGTGTGGCTGACACAGTGCTGCAGCTGCGGCGGCAGAGACACCACAAGATGGTGCAGACTGAGGACGAGTTGCTGAGGAAGGTCCGAGAGTGCTGGAGCGGCAGGCTGAGTGTGGCTGACACAGTGCTGCAGCTGCGGCGGCAGAGACACCACAAGATGGTGCAGACTGAGGACGAGTTGCTGAGGAAGGTCCGAGAGTGCTGGAGCGGCAGGCTGAGTGTGGCTGACACAGTGCTGCAGCTGCGGCGGCAGAGACACCACAAGATGGTGCAGACTGAGGACGAGTTGCTGAGGAAGGTCCGAGAGTGCTGGAGCGGCAGGCTGAGTGTGGCTGACACAGTGCTGCAGCTGCGGCGGCAGAGACCCCACAAGATGGTGCAGACTGAGGACGAGTTGCTGAGGAAGGTCCGAGAGTGCTGGGGCGGCAGGCTGAGTGTGGCTGACACAGTGCTGCAGCTGCGGCGGCAGAGACACCACAAGATGGTGCAGACTGAGGACGAGTTGCTGAGGAAGGTCCGAGAGAGCTGGGGCGGCAGGCTCAGTGTGGCTGACACAGTGCTGCAGCTGCGGCGGCAGAGACACCACAAGATGGTGCAGACTGAGGACGAGTTGCTGAGGAAGGTCCGAGAGAGCTGGAGCGGCAGGCTGAGTGTGGCTGACACAGTGCTGCAGCTGCGGCGGCAGAGACACCACAAGATGGTGCAGACTGAGGACGAGTTGCTGAGGAAGGTCCGAGAGTGCTGGAGCGGCAGGCTGAGTGTGGCTGACACAGTGCTGCAGCTGCGGCGGCAGAGACACCACAAGATGGTGCAGACTGAGGACGAGTTGCTGAGGAAGGTCCGAGAGTGCTGGAGCGGCAGGCTGAGTGTGGCTGACACAGTGCTGCAGCTGCGGCGGCAGAGACACCACAAGATGGTGCAGACTGAGGACGAGTTGCTGAGGAAGGTCCGAGAGTGCTGGAGCGGCAGGCTGAGTGTGGCTGACACAGTGCTGCAGCTGCGGCGGCAGAGACCCCACAAGATGGTGCAGACTGAGGACGAGTTGCTGAGGAAGGTCCGAGAGTGCTGGGGCGGCAGGCTGAGTGTGGCTGACACAGTGCTGCAGCTGCGGCGGCAGAGACACCACAAGATGGTGCAGACTGAGGACGAGTTGCTGAGGAAGGTCCGAGAGAGCTGGGGCGGCAGGCTGAGTGTGGCTGACACAGTGCTGCAGCTGCGGCGGCAGAGACACCACAAGATGGTGCAGACTGAGGACGAGTTGCTGAGGAAGGTCCGAGAGAGCTGGAGCGGCAGGCTGAGTGTGGCTGACACAGTGCTGCAGCTGCGGCGGCAGAGACACCACAAGATGGTGCAGACTGAGGACGAGTTGCTGAGGAAGGTCCGAGAGTGCTGGAGCGGCAGGCTGAGTGTGGCTGACACAGTGCTGCAGCTGCGGCGGCAGAGACACCACAAGATGGTGCAGACTGAGGACGAGTTGCTGAGGAAGGTCCGAGAGAGCTGGAGCGGCAGGCTGAGTGTGGCTGACACAGTGCTGCAGCTGCGGCGGCAGAGACACCACAAGATGGTGCAGACTGAGGACGAGTTGCTGAGGAAGGTCCGAGAGTGCTGGGGCGGCAGGCTGAGTGTGGCTGACACAGTGCTGCAGCTACGGCGGCAGAGACACCACAAGATGGTGCAGACTGAGgaTCAGTATTGGTACATATACAAGTGTTTGAAGTACGCTCTGGAGCATCACACCTCACCATTCGAGAGAGATACGAAGGAGACGCACTGTCAATACCATACACGTCGCTTGGTTCACCCAGCAGCGACGGTTTACTGTAGTGCTACCAAGGAGCAAAGAGAATGCGAACTGGCGAGATCCCATCTGGGCGTGTTCCGGTCGCAGTAA
- Protein Sequence
- MVQTEDELLRKVRECWGGRLSVADTVLQLRRQRHHKMVKTEDELLRKVQESWGGRLSVADTVLQLRQQRHHKMVQTEDELLRKVRECWSGRLSVADTVLQLQRQRHHKMVQTEDELLRKVRESWSGRLSVADTVLQLRRQRHHKMVQTEDELLRKVRECWGGRLSVADTVLQLRRQRHHKMVQTEDELLRKVRECWGGRLSVADTVLQLRRQRHHKMVQTEDELLRKVRESWSGRLSVADTVLQLRRQRHHKMVQTEDELLRKVRECWGGRLSVADTVLQLRRQRHHKMVQTEDELLRKVRECWSGRLSVADTVLQLQRQRHHKMVQTEEGPRVLGRQADTVLQLRRQRHHKMVQTEDELLRKVRECWSDRLSVADTVLQLRRQRHHKMVQTEDELLRKVQECWSGRLSVADTVLQLRRQRHHKMVQTEDELLRKVRECWSGRLSVADTVLQLRRQRHHKMVQTEDELLRKVRECWGGRLSVADTVLQLRRQRHHKMVQTEDELLRKVRESWGGRLSVADTVLQLRRQRHHKMVQTEDELLRKVRESWSGRLSVADTVLQLRRQRHHKMVQTEDELLRKVRECWSGRLSVADTVLQLRRQRHHKMVQTEDELLRKVRECWSGRLSVADTVLQLRRQRHHKMVQTEDELLRKVRECWSGRLSVADTVLQLRRQRPHKMVQTEDELLRKVRECWGGRLSVADTVLQLRRQRHHKMVQTEDELLRKVRESWGGRLSVADTVLQLRRQRHHKMVQTEDELLRKVRESWSGRLSVADTVLQLRRQRHHKMVQTEDELLRKVRECWSGRLSVADTVLQLRRQRHHKMVQTEDELLRKVRECWSGRLSVADTVLQLRRQRHHKMVQTEDELLRKVRECWSGRLSVADTVLQLRRQRPHKMVQTEDELLRKVRECWGGRLSVADTVLQLRRQRHHKMVQTEDELLRKVRESWGGRLSVADTVLQLRRQRHHKMVQTEDELLRKVRESWSGRLSVADTVLQLRRQRHHKMVQTEDELLRKVRECWSGRLSVADTVLQLRRQRHHKMVQTEDELLRKVRESWSGRLSVADTVLQLRRQRHHKMVQTEDELLRKVRECWGGRLSVADTVLQLRRQRHHKMVQTEDQYWYIYKCLKYALEHHTSPFERDTKETHCQYHTRRLVHPAATVYCSATKEQRECELARSHLGVFRSQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -